Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P247T20 Lonicera japonica HOM05D005970 ORTHO05D007146 4.5e-65 251.1 130 100.0
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 5.2e-37 157.9 93 87.1
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 2.1e-25 119.4 93 63.4
Cpa.g.sc164.8 Carica papaya HOM05D005970 ORTHO05D007146 3.5e-25 118.6 96 61.5
Phvul.007G002300 Phaseolus vulgaris HOM05D005970 ORTHO05D007146 1.3e-24 116.7 96 59.4
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 2.5e-23 112.5 96 59.4
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 4.3e-23 111.7 97 56.7
Haze_11058 Corylus avellana HOM05D005970 ORTHO05D007146 7.3e-23 110.9 95 57.9
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 2.8e-22 109.0 98 54.1
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 3.6e-22 108.6 96 57.3
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 3.6e-22 108.6 96 55.2
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 4.7e-22 108.2 94 55.3
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 6.2e-22 107.8 103 52.4
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 6.2e-22 107.8 103 52.4
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 8.1e-22 107.5 102 54.9
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 1.1e-21 107.1 94 55.3
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 1.1e-21 107.1 94 56.4
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 1.4e-21 106.7 99 56.6
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 1.4e-21 106.7 89 58.4
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 1.4e-21 106.7 94 55.3
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 1.4e-21 106.7 95 58.9
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 1.8e-21 106.3 93 59.1
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 2.4e-21 105.9 96 52.1
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 3.1e-21 105.5 96 56.2
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 3.1e-21 105.5 95 58.9
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 4.0e-21 105.1 97 54.6
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 4.0e-21 105.1 100 53.0
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 4.0e-21 105.1 100 53.0
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 4.0e-21 105.1 100 53.0
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 6.8e-21 104.4 80 63.8
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 8.9e-21 104.0 91 56.0
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 8.9e-21 104.0 93 55.9
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 8.9e-21 104.0 89 53.9
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 8.9e-21 104.0 98 54.1
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.2e-20 103.6 100 52.0
Glyma.10G297100 Glycine max HOM05D005970 ORTHO05D007146 1.2e-20 103.6 94 57.4
Lalb_Chr06g0164581 Lupinus albus HOM05D005970 ORTHO05D007146 1.2e-20 103.6 103 51.5
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 1.5e-20 103.2 119 50.4
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 1.5e-20 103.2 89 57.3
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 2.0e-20 102.8 83 57.8
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 2.0e-20 102.8 94 52.1
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 2.0e-20 102.8 96 50.0
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 3.4e-20 102.1 95 53.7
Manes.04G050700 Manihot esculenta HOM05D005970 ORTHO05D007146 5.8e-20 101.3 83 59.0
ClCG08G003970 Citrullus lanatus HOM05D005970 ORTHO05D007146 7.6e-20 100.9 102 52.9
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 9.9e-20 100.5 100 53.0
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 9.9e-20 100.5 83 56.6
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 2.2e-19 99.4 98 53.1
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 2.2e-19 99.4 83 54.2
DCAR_028457 Daucus carota HOM05D005970 ORTHO05D007146 2.9e-19 99.0 87 56.3
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 4.9e-19 98.2 100 53.0
Potri.002G231567 Populus trichocarpa HOM05D005970 ORTHO05D007146 6.4e-19 97.8 87 55.2
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 6.4e-19 97.8 82 59.8
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 8.4e-19 97.4 86 57.0
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 1.9e-18 96.3 102 53.9
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 1.9e-18 96.3 96 51.0
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 1.9e-18 96.3 86 55.8
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 1.9e-18 96.3 82 58.5
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 3.2e-18 95.5 92 51.1
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 3.2e-18 95.5 86 54.7
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 1.2e-17 93.6 92 51.1
Cc00_g08710 Coffea canephora HOM05D005970 ORTHO05D007146 2.1e-17 92.8 88 55.7
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 2.1e-17 92.8 98 51.0
Nn1g09841 Nelumbo nucifera HOM05D005970 ORTHO05D007146 2.7e-17 92.4 85 54.1
MD04G1032600 Malus domestica HOM05D005970 ORTHO05D007146 7.8e-17 90.9 75 58.7
SEGI_11354 Sequoiadendron giganteum HOM05D005970 ORTHO05D007146 1.0e-16 90.5 92 48.9
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 1.3e-16 90.1 93 51.6
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 1.3e-16 90.1 89 51.7
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 1.3e-16 90.1 85 54.1
vmacro00561 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 1.3e-16 90.1 70 62.9
CDE09G0649 Ceratophyllum demersum HOM05D005970 ORTHO05D007146 1.7e-16 89.7 84 50.0
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 3.0e-16 89.0 91 51.6
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 3.9e-16 88.6 92 53.3
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 3.9e-16 88.6 80 53.8
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 1.1e-15 87.0 83 54.2
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 1.5e-15 86.7 97 50.5
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 1.9e-15 86.3 86 53.5
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 1.9e-15 86.3 83 55.4
CARHR005310 Cardamine hirsuta HOM05D005970 ORTHO05D007146 2.5e-15 85.9 79 57.0
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 3.3e-15 85.5 90 46.7
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 4.3e-15 85.1 99 47.5
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 5.6e-15 84.7 92 48.9
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 5.6e-15 84.7 86 52.3
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 9.6e-15 84.0 83 53.0
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 9.6e-15 84.0 83 53.0
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 9.6e-15 84.0 83 53.0
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 9.6e-15 84.0 83 53.0
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.6e-14 83.2 97 48.5
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 2.1e-14 82.8 91 49.5
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 1.1e-13 80.5 82 48.8
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 1.1e-13 80.5 82 48.8
Os01g0900200 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 1.2e-12 77.0 96 44.8
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 2.0e-12 76.3 75 53.3
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 2.0e-12 76.3 75 53.3
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 1.3e-11 73.6 63 54.0
Zm00001eb144480 Zea mays HOM05D005970 ORTHO05D007146 1.7e-11 73.2 75 50.7
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 2.9e-11 72.4 71 50.7
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 1.2e-09 67.0 62 51.6
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 1.7e-08 63.2 82 43.9
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 3.0e-08 62.4 80 42.5
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 3.9e-08 62.0 37 73.0
SMO367G0517 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 3.9e-08 62.0 109 34.9


User provided reference genes

Program Settings