Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P240T17 Lonicera japonica HOM05D017178 ORTHO05D012096 9.7e-77 290.0 143 100.0
Lj5A276G88 Lonicera japonica HOM05D017178 ORTHO05D012096 1.2e-55 219.9 146 78.8
Lj3P1070T22 Lonicera japonica HOM05D017178 ORTHO05D012096 2.0e-50 202.6 146 74.0
Lj3P665T11 Lonicera japonica HOM05D017178 ORTHO05D012096 3.0e-46 188.7 120 80.8
Dinv29666 Davidia involucrata HOM05D000706 ORTHO05D001554 6.8e-14 81.3 91 52.7
TAR628G1033 Trochodendron aralioides HOM05D000706 ORTHO05D012096 4.1e-11 72.0 147 32.7
Hma1.2p1_0157F.1_g069030 Hydrangea macrophylla HOM05D017178 ORTHO05D012096 3.5e-10 68.9 70 50.0
Hma1.2p1_1368F.1_g278556 Hydrangea macrophylla HOM05D017178 ORTHO05D012096 3.5e-10 68.9 70 50.0
TAR376G1119 Trochodendron aralioides HOM05D000706 ORTHO05D001554 6.0e-10 68.2 131 33.6
Rhsim06G0200400 Rhododendron simsii HOM05D017178 ORTHO05D012096 3.9e-09 65.5 77 45.5
Lj6g0005324 Lotus japonicus HOM05D000706 ORTHO05D001554 1.5e-08 63.5 71 46.5
Sabra04G0084500 Salix brachista HOM05D000706 ORTHO05D001554 1.9e-08 63.2 90 37.8
Lalb_Chr18g0053861 Lupinus albus HOM05D000706 ORTHO05D012096 2.5e-08 62.8 71 49.3
SalBow6G2696 Salvia bowleyana HOM05D000706 ORTHO05D001554 2.5e-08 62.8 79 43.0
Manes.10G110800 Manihot esculenta HOM05D000706 ORTHO05D001554 3.3e-08 62.4 116 36.2
Glyma.11G208500 Glycine max HOM05D000706 ORTHO05D001554 1.6e-07 60.1 71 42.3
Sed0026982 Sechium edule HOM05D000706 ORTHO05D012096 1.6e-07 60.1 88 36.4
Dinv09371 Davidia involucrata HOM05D000706 ORTHO05D001554 4.7e-07 58.5 72 41.7
Lj2g0014541 Lotus japonicus HOM05D000706 ORTHO05D001554 4.7e-07 58.5 86 34.9
QL02p102391 Quercus lobata HOM05D043302 ORTHO05D012096 6.2e-07 58.2 120 35.0
QL02p103028 Quercus lobata HOM05D043302 ORTHO05D012096 6.2e-07 58.2 120 35.0
Ca_25266_v3 Cicer arietinum L. HOM05D000706 ORTHO05D001554 8.1e-07 57.8 73 39.7
FAN23G1421 Fragaria x ananassa HOM05D000706 ORTHO05D001554 1.1e-06 57.4 72 41.7
MD15G1440800 Malus domestica HOM05D000706 ORTHO05D012096 1.1e-06 57.4 102 35.3
TAR636G1687 Trochodendron aralioides HOM05D000325 ORTHO05D012096 1.4e-06 57.0 69 44.9
EL10Ac4g09693 Beta vulgaris HOM05D000706 ORTHO05D001554 2.4e-06 56.2 71 39.4
CSS0020817 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D001554 2.4e-06 56.2 70 40.0
FvH4_1g25810 Fragaria vesca HOM05D000706 ORTHO05D001554 2.4e-06 56.2 72 41.7
FAN19G2540 Fragaria x ananassa HOM05D000706 ORTHO05D001554 2.4e-06 56.2 72 41.7
FAN28G2355 Fragaria x ananassa HOM05D000706 ORTHO05D001554 2.4e-06 56.2 72 41.7
SGA_v2.0_scaffold167G38452 Striga asiatica HOM05D000706 ORTHO05D001554 4.0e-06 55.5 61 37.7
Cfa019817 Carpinus fangiana HOM05D000706 ORTHO05D001554 5.2e-06 55.1 120 35.0
MELO3C016482.2 Cucumis melo HOM05D000706 ORTHO05D001554 5.2e-06 55.1 87 35.6
Thhalv10013270m.g Eutrema salsugineum HOM05D000706 ORTHO05D001554 5.2e-06 55.1 76 35.5
TWI79G1627 Tripterygium wilfordii HOM05D000706 ORTHO05D001554 5.2e-06 55.1 120 33.3
TAR633G2556 Trochodendron aralioides HOM05D000706 ORTHO05D012096 6.8e-06 54.7 75 38.7
Potri.004G133600 Populus trichocarpa HOM05D000706 ORTHO05D001554 8.9e-06 54.3 90 34.4


User provided reference genes

Program Settings