Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P194T52 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-53 212.2 100 100.0
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-51 206.1 99 96.0
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-48 195.3 99 91.9
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 6.8e-37 157.1 99 72.7
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 6.8e-37 157.1 99 73.7
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-36 156.0 99 71.7
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-36 154.1 95 72.6
Lj4P818T19 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-35 150.6 97 71.1
Lj3A194T57 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-34 147.5 90 77.8
Lj9C659T16 Lonicera japonica HOM05D002180 ORTHO05D001339 6.2e-30 134.0 85 70.6
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-29 131.3 99 58.6
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-29 131.3 99 61.6
Lj7A706G42 Lonicera japonica HOM05D001880 ORTHO05D001339 1.9e-26 122.5 73 72.6
Lj3C1079T7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-25 119.4 99 60.6
Lj7P583T27 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-25 119.4 71 74.6
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-25 119.0 82 62.2
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-24 115.5 100 55.0
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-24 115.2 99 52.5
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-24 114.8 99 52.5
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-24 114.8 99 52.5
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-24 114.4 99 53.5
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 5.6e-23 110.9 99 50.5
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-22 109.0 100 52.0
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 2.8e-22 108.6 99 50.5
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-22 108.2 99 45.5
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-22 107.8 100 53.0
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-21 105.9 99 45.5
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-21 105.5 100 50.0
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-21 105.5 100 50.0
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-21 105.5 100 50.0
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-21 105.1 99 48.5
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 9.0e-21 103.6 99 47.5
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-20 103.2 100 49.0
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-20 101.7 99 45.5
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-20 101.7 99 45.5
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 3.4e-20 101.7 99 45.5
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-20 101.3 73 54.8
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-20 101.3 99 43.4
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-20 100.9 99 45.5
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-20 100.9 99 40.4
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 7.6e-20 100.5 99 48.5
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 7.6e-20 100.5 99 43.4
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-20 100.1 99 45.5
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 9.9e-20 100.1 73 54.8
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-19 99.8 99 39.4
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-19 99.8 99 48.5
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-19 99.4 98 42.9
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-19 99.0 99 47.5
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-19 99.0 100 46.0
Lj1P804T34 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-19 98.6 99 43.4
Lj5P198T48 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-19 98.6 81 55.6
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 2.9e-19 98.6 99 44.4
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-19 98.6 99 48.5
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-19 98.2 73 54.8
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-19 98.2 99 41.4
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-19 97.8 99 41.4
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-19 97.8 99 42.4
Lju50A23T25 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-19 97.8 99 49.5
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-19 97.4 99 45.5
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-19 97.1 99 43.4
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 8.4e-19 97.1 98 40.8
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-18 96.7 99 47.5
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-18 95.9 84 48.8
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-18 95.9 73 53.4
Lju583C3G3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-18 95.5 99 43.4
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-18 95.1 73 50.7
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-18 94.7 99 42.4
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-18 94.4 71 56.3
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-18 94.4 90 43.3
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 1.2e-17 93.2 99 46.5
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.2e-17 93.2 99 46.5
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 1.2e-17 93.2 99 46.5
Lj2A804T55 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-17 92.8 73 56.2
Lj2C953T7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-17 91.7 68 52.9
Lj9A6T13 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-17 91.7 90 50.0
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-17 91.3 90 42.2
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-17 91.3 88 40.9
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-17 90.5 99 42.4
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-17 90.5 99 40.4
Lj2C10T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.0e-16 90.1 99 46.5
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-16 89.4 57 63.2
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 2.3e-16 89.0 99 45.5
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-16 88.6 67 53.7
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-16 88.2 90 41.1
Lj7P754T25 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-16 88.2 53 71.7
Lj3C203G4 Lonicera japonica HOM05D009066 ORTHO05D001339 8.7e-16 87.0 99 45.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 5.6e-15 84.3 66 47.0
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 9.6e-15 83.6 99 42.4
Lj9C248G5 Lonicera japonica HOM05D002180 ORTHO05D001339 9.6e-15 83.6 57 61.4
Lj2A1218T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-14 83.2 89 44.9
CSS0004318 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.6e-14 82.8 95 38.9
Lj2P420T16 Lonicera japonica HOM05D009066 ORTHO05D001339 2.1e-14 82.4 90 45.6
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-14 82.0 72 48.6
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-14 82.0 59 57.6
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-14 81.6 99 41.4
Lj5P747T21 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-14 81.6 71 50.7
Lj2C8G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-14 81.3 55 61.8
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-14 81.3 99 41.4
Lj3P276T13 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-14 81.3 69 49.3
Lj4P575T24 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-14 81.3 71 45.1
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.1e-13 80.1 99 36.4
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 80.1 99 41.4
Lj7C730T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 80.1 47 68.1
Lj1C1063T3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-13 79.3 57 59.6
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 1.8e-13 79.3 58 58.6
Lj9A249G18 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-13 79.0 71 52.1
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 4.0e-13 78.2 99 35.4
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-13 78.2 99 39.4
Lj7P99T31 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-13 78.2 72 44.4
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 5.3e-13 77.8 99 35.4
Lj6P523T13 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-13 77.4 48 68.8
Lj4C812T3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-12 76.3 32 96.9
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 75.9 99 39.4
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 75.9 99 39.4
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 75.9 99 39.4
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.6e-12 75.5 72 43.1
Lj2C1216G5 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-12 75.1 71 50.7
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-12 75.1 99 41.4
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.5e-12 74.7 99 38.4
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-12 74.7 99 38.4
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 4.5e-12 74.7 97 40.2
Lj7C708T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-11 72.0 79 41.8
Lj7P489T18 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-11 72.0 73 41.1
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-11 71.6 71 43.7
Lj5C814G6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-11 71.6 70 42.9
Lj5P610T17 Lonicera japonica HOM05D002180 ORTHO05D001339 6.5e-11 70.9 81 43.2
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 1.1e-10 70.1 71 43.7
Lju857C0T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-10 70.1 57 52.6
Lj1C860G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-10 69.7 91 37.4
Lj2C14T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-10 69.3 79 46.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-10 68.9 99 34.3
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.2e-10 68.6 99 36.4
Lj1A1205G56 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-09 64.7 63 41.3
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 6.0e-09 64.3 72 36.1
Lj7C477T10 Lonicera japonica HOM05D002180 ORTHO05D001339 6.0e-09 64.3 98 37.8
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.9e-09 63.9 88 31.8
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.9e-09 63.9 88 33.0
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-08 62.8 77 39.0
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 2.3e-08 62.4 99 34.3
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-08 61.2 83 33.7
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-08 61.2 83 33.7
Lj7A574G60 Lonicera japonica HOM05D003119 ORTHO05D003559 5.1e-08 61.2 44 59.1
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.1e-08 61.2 49 51.0
Lj8C101T4 Lonicera japonica HOM05D002180 ORTHO05D001339 6.7e-08 60.8 66 39.4
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 8.7e-08 60.5 73 37.0
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.1e-07 60.1 78 29.5
Lj3C240G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 60.1 68 30.9
Lju2566C0G12 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 60.1 66 37.9
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.1e-07 60.1 49 49.0
Lj9A423T72 Lonicera japonica HOM05D009066 ORTHO05D001339 1.9e-07 59.3 44 56.8
PGSC0003DMG400041897 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.9e-07 59.3 49 49.0
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.5e-07 58.9 99 34.3
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-07 58.9 78 28.2
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.5e-07 58.9 94 35.1
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.3e-07 58.5 83 32.5
Lj3A270T43 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-07 58.5 46 54.3
Lj7P755T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-07 58.5 43 53.5
Lj8P504T20 Lonicera japonica HOM05D009066 ORTHO05D001339 4.3e-07 58.2 69 40.6
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 4.3e-07 58.2 71 35.2
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 5.7e-07 57.8 71 42.3
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 9.6e-07 57.0 99 30.3
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.3e-06 56.6 49 44.9
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.6e-06 56.2 72 41.7
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.6e-06 56.2 93 30.1
ClCG07G006500 Citrullus lanatus HOM05D005236 ORTHO05D006557 1.6e-06 56.2 82 34.1
Lj1P591T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 56.2 40 62.5
Nn1g00933 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.6e-06 56.2 70 47.1
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-06 56.2 49 49.0
PGSC0003DMG400037701 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-06 55.8 72 34.7
CSS0007549 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.8e-06 55.5 46 50.0
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 2.8e-06 55.5 72 37.5
Sopen10g005760 Solanum pennellii HOM05D008877 ORTHO05D006370 2.8e-06 55.5 49 49.0
Dinv32194 Davidia involucrata HOM05D000121 ORTHO05D001726 3.7e-06 55.1 55 41.8
Lj2P897T21 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 55.1 68 30.9
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.8e-06 54.7 70 34.3
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.2e-06 54.3 99 28.3
Solyc10g012000.1 Solanum lycopersicum HOM05D008877 ORTHO05D006370 8.2e-06 53.9 49 46.9


User provided reference genes

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