Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P145T19 Lonicera japonica HOM05D008999 ORTHO05D010908 5.9e-126 454.1 217 100.0
Lj3C146T0 Lonicera japonica HOM05D008999 ORTHO05D010908 2.7e-62 242.7 244 55.7
Lj3P142T29 Lonicera japonica HOM05D008999 ORTHO05D010908 5.6e-60 235.0 228 57.5
Lj3P145T15 Lonicera japonica HOM05D008999 ORTHO05D010908 1.3e-56 223.8 237 52.7
Lj3P145T24 Lonicera japonica HOM05D008999 ORTHO05D010908 3.5e-54 215.7 225 56.0
Lj3P149T13 Lonicera japonica HOM05D008999 ORTHO05D010908 2.1e-51 206.5 225 52.4
Lj3P150T17 Lonicera japonica HOM05D008999 ORTHO05D010908 2.8e-51 206.1 239 49.4
Lj3C143T0 Lonicera japonica HOM05D008999 ORTHO05D010908 6.4e-48 194.9 206 54.4
Lj3P150T21 Lonicera japonica HOM05D008999 ORTHO05D010908 3.2e-47 192.6 225 49.8
Lj3P145T20 Lonicera japonica HOM05D008999 ORTHO05D010908 1.3e-45 187.2 243 45.3
Lj3P142T26 Lonicera japonica HOM05D008999 ORTHO05D010908 3.9e-45 185.7 244 45.9
Lj3A149T31 Lonicera japonica HOM05D008999 ORTHO05D010908 3.5e-38 162.5 219 45.7
Lj3A144G23 Lonicera japonica HOM05D008999 ORTHO05D010908 4.2e-31 139.0 133 55.6
Lj3P147T7 Lonicera japonica HOM05D008999 ORTHO05D010908 2.1e-30 136.7 110 61.8
Lj3P149T27 Lonicera japonica HOM05D008999 ORTHO05D010908 2.1e-30 136.7 102 64.7
Lj3C148T0 Lonicera japonica HOM05D008999 ORTHO05D010908 6.0e-30 135.2 199 43.7
Lj3P144T23 Lonicera japonica HOM05D008999 ORTHO05D010908 2.3e-29 133.3 97 66.0
Lj3P147T4 Lonicera japonica HOM05D008999 ORTHO05D010908 1.1e-28 131.0 102 61.8
Lj3P143T16 Lonicera japonica HOM05D008999 ORTHO05D010908 1.9e-28 130.2 102 63.7
Lj3A149G31 Lonicera japonica HOM05D008999 ORTHO05D010908 5.7e-28 128.6 102 62.7
Lj3P114T25 Lonicera japonica HOM05D008999 ORTHO05D010908 7.4e-28 128.3 101 61.4
Lj3P144T18 Lonicera japonica HOM05D008999 ORTHO05D010908 7.4e-28 128.3 101 61.4
Lj3P146T14 Lonicera japonica HOM05D008999 ORTHO05D010908 6.3e-27 125.2 113 57.5
Lj3P143T13 Lonicera japonica HOM05D008999 ORTHO05D010908 4.1e-26 122.5 113 56.6
Lj3C5T2 Lonicera japonica HOM05D008999 ORTHO05D010908 1.7e-24 117.1 99 60.6
Lj3A144G22 Lonicera japonica HOM05D008999 ORTHO05D010908 2.2e-24 116.7 131 52.7
Lj3P149T19 Lonicera japonica HOM05D008999 ORTHO05D010908 1.4e-23 114.0 100 58.0
Lj3A148G6 Lonicera japonica HOM05D008999 ORTHO05D010908 3.6e-22 109.4 80 67.5
Lj3P150T14 Lonicera japonica HOM05D008999 ORTHO05D010908 4.6e-22 109.0 96 58.3
Lj3P146T20 Lonicera japonica HOM05D008999 ORTHO05D010908 3.3e-20 102.8 90 61.1
Lj3P146T17 Lonicera japonica HOM05D008999 ORTHO05D010908 6.5e-16 88.6 69 58.0
Lj3P149T16 Lonicera japonica HOM05D008999 ORTHO05D010908 6.1e-14 82.0 62 62.9
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 5.7e-12 75.5 211 29.4
Lj3C144T9 Lonicera japonica HOM05D008999 ORTHO05D010908 2.2e-11 73.6 127 39.4
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 6.3e-11 72.0 222 27.5
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.8e-10 70.5 204 29.4
FvH4_7g33810 Fragaria vesca HOM05D000007 ORTHO05D009073 5.3e-10 68.9 157 31.8
Potri.008G144000 Populus trichocarpa HOM05D000171 ORTHO05D010908 9.1e-10 68.2 205 28.8
Sabra08G0109000 Salix brachista HOM05D000171 ORTHO05D000101 9.1e-10 68.2 201 27.4
Sabra15G0099300 Salix brachista HOM05D000171 ORTHO05D000101 1.2e-09 67.8 201 27.4
Duzib205G1409 Durio zibethinus HOM05D000171 ORTHO05D000101 2.0e-09 67.0 206 28.6
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.6e-09 66.6 211 28.4
Lj3C143T8 Lonicera japonica HOM05D008999 ORTHO05D010908 7.7e-09 65.1 97 42.3
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.0e-08 64.7 179 28.5
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.0e-08 64.7 205 29.8
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 1.3e-08 64.3 202 29.7
Rhsim12G0109800 Rhododendron simsii HOM05D009398 ORTHO05D011511 1.3e-08 64.3 214 28.0
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 2.9e-08 63.2 196 31.1
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 5.0e-08 62.4 210 29.0
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 6.5e-08 62.0 195 29.2
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 6.5e-08 62.0 195 29.2
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 6.5e-08 62.0 217 26.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.1e-07 61.2 218 28.0
A09p35110 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-07 60.8 214 24.8
CSS0046872 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 2.5e-07 60.1 202 29.2
AL3G14200 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.5e-07 58.9 200 26.0
CSS0043495 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D000101 5.5e-07 58.9 150 32.0
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 7.2e-07 58.5 203 27.1
Aa31LG6G12080 Aethionema arabicum HOM05D000171 ORTHO05D000101 9.4e-07 58.2 203 26.1
FAN26G1355 Fragaria x ananassa HOM05D009792 ORTHO05D009073 9.4e-07 58.2 205 29.8
MD13G1020600 Malus domestica HOM05D000007 ORTHO05D009073 9.4e-07 58.2 200 25.5
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 9.4e-07 58.2 202 29.7
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 1.2e-06 57.8 198 25.8
Aqoxy1G01368 Aquilegia oxysepala HOM05D000007 ORTHO05D004496 1.6e-06 57.4 140 30.7
A05p25840 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-06 57.0 166 26.5
BraA05t21470Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-06 57.0 204 24.5
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 2.1e-06 57.0 179 25.7
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 3.6e-06 56.2 210 26.2
FAN07G0854 Fragaria x ananassa HOM05D009792 ORTHO05D035474 7.9e-06 55.1 145 29.7
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 7.9e-06 55.1 195 28.2


User provided reference genes

Program Settings