Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.8e-105 386.0 200 100.0
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 4.5e-72 275.0 194 77.3
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 4.5e-72 275.0 203 75.4
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 3.8e-71 271.9 200 74.5
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.9e-70 269.6 203 74.9
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.9e-70 269.6 203 74.9
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 2.5e-70 269.2 159 84.9
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.2e-70 268.9 204 74.0
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 5.5e-70 268.1 185 79.5
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 9.4e-70 267.3 186 77.4
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 1.6e-69 266.5 189 75.7
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 3.6e-69 265.4 202 74.8
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 7.9e-69 264.2 189 75.7
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 1.0e-68 263.8 203 72.4
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 3.9e-68 261.9 188 74.5
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 3.9e-68 261.9 170 78.2
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.2e-68 261.5 157 83.4
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.1e-67 260.4 165 80.6
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 1.5e-67 260.0 169 79.9
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.0e-67 259.6 199 74.4
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.3e-67 258.8 188 73.9
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 5.7e-67 258.1 188 73.9
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 7.4e-67 257.7 199 70.9
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 1.3e-66 256.9 206 70.9
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 2.2e-66 256.1 170 78.8
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 2.2e-66 256.1 176 76.1
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 2.8e-66 255.8 172 78.5
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 2.8e-66 255.8 157 82.2
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 2.8e-66 255.8 190 74.7
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.8e-66 255.0 154 83.1
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 6.3e-66 254.6 205 70.7
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 6.3e-66 254.6 199 72.4
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.2e-66 254.2 206 72.3
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.1e-65 253.8 157 81.5
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.4e-65 253.4 206 68.4
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 1.8e-65 253.1 195 70.8
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 2.4e-65 252.7 172 78.5
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 4.1e-65 251.9 202 70.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 4.1e-65 251.9 198 69.2
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 7.0e-65 251.1 202 71.3
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 7.0e-65 251.1 206 70.4
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 2.0e-64 249.6 200 69.5
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 2.0e-64 249.6 197 70.1
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 3.5e-64 248.8 165 76.4
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 4.5e-64 248.4 210 67.1
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 7.7e-64 247.7 176 76.1
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 7.7e-64 247.7 196 69.9
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 7.7e-64 247.7 194 69.1
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.3e-63 246.9 175 74.3
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.3e-63 246.9 207 71.5
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 2.2e-63 246.1 194 69.6
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 3.8e-63 245.4 206 68.4
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 3.8e-63 245.4 163 79.1
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 3.8e-63 245.4 163 79.1
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 5.0e-63 245.0 203 67.0
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 8.5e-63 244.2 197 68.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.1e-62 243.8 201 69.2
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.5e-62 243.4 171 79.5
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 4.2e-62 241.9 158 82.3
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 4.2e-62 241.9 197 72.6
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 7.2e-62 241.1 206 67.0
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 7.2e-62 241.1 197 67.5
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 9.4e-62 240.7 197 67.0
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.2e-61 240.4 171 74.9
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.2e-61 240.4 164 76.2
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.6e-61 240.0 202 70.3
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 4.7e-61 238.4 172 76.2
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 8.0e-61 237.7 197 66.5
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 8.0e-61 237.7 203 65.5
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.0e-60 237.3 196 65.8
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.4e-60 236.9 200 66.5
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 2.3e-60 236.1 200 68.5
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 5.2e-60 235.0 202 65.8
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 8.8e-60 234.2 166 74.1
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 1.2e-59 233.8 194 64.9
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 3.3e-59 232.3 194 65.5
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 9.7e-59 230.7 199 64.3
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 9.7e-59 230.7 197 64.0
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 1.3e-58 230.3 195 65.1
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 2.8e-58 229.2 199 62.3
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 2.8e-58 229.2 198 64.6
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 2.8e-58 229.2 201 67.7
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 3.7e-58 228.8 194 63.4
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 8.2e-58 227.6 166 73.5
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 8.2e-58 227.6 201 66.2
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.4e-57 226.9 169 71.0
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 4.1e-57 225.3 170 72.9
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.6e-56 223.4 128 84.4
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.3e-55 220.3 186 67.7
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 2.2e-55 219.5 199 65.3
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 3.8e-55 218.8 199 64.8
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 4.2e-54 215.3 116 87.1
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 4.7e-53 211.8 121 84.3
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 6.1e-53 211.5 176 66.5
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 4.0e-52 208.8 129 77.5
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 2.4e-49 199.5 165 63.0
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 3.5e-48 195.7 201 58.2
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 7.7e-48 194.5 178 58.4
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 2.9e-47 192.6 113 80.5
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 9.5e-46 187.6 113 77.0
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.6e-45 186.8 113 78.8
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 3.6e-45 185.7 125 69.6
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 3.6e-45 185.7 150 64.7
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 1.0e-44 184.1 204 49.5
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 8.9e-44 181.0 121 71.1
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 7.0e-41 171.4 201 54.2
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 8.0e-37 157.9 185 53.5
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 1.4e-36 157.1 110 61.8
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.8e-20 103.6 146 35.6
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 4.1e-17 92.4 154 34.4
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 5.4e-17 92.0 51 82.4
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 2.7e-16 89.7 106 44.3
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.6e-13 80.5 119 31.1


User provided reference genes

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