Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P1023T52 Lonicera japonica HOM05D004568 ORTHO05D005343 5.6e-107 391.0 199 100.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.5e-47 191.4 216 57.9
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 7.5e-43 177.9 199 54.3
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.9e-38 163.3 224 50.0
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 2.5e-38 162.9 200 51.5
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 3.2e-38 162.5 200 52.0
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 1.2e-37 160.6 202 53.0
Haze_11818 Corylus avellana HOM05D004568 ORTHO05D005343 2.7e-37 159.5 229 47.6
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 8.0e-37 157.9 196 54.1
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 1.4e-36 157.1 208 50.0
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.2e-35 154.1 196 53.1
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 3.4e-35 152.5 190 55.8
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 1.2e-32 144.1 232 44.8
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 5.9e-32 141.7 199 48.7
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 7.7e-32 141.4 228 43.9
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 7.7e-32 141.4 258 40.7
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 1.0e-31 141.0 209 46.9
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 5.0e-31 138.7 235 45.1
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 8.5e-31 137.9 232 46.6
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 7.2e-30 134.8 238 42.0
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 7.2e-30 134.8 231 43.7
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 1.6e-29 133.7 235 43.0
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 1.6e-29 133.7 235 43.0
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 2.1e-29 133.3 227 42.7
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 4.7e-29 132.1 257 39.3
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 8.0e-29 131.3 185 52.4
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 2.3e-28 129.8 235 41.3
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 5.2e-28 128.6 219 44.3
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 5.2e-28 128.6 211 46.4
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 8.8e-28 127.9 244 43.0
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 8.8e-28 127.9 198 47.0
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 1.5e-27 127.1 212 42.9
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 2.6e-27 126.3 203 46.3
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.6e-27 126.3 253 38.7
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 5.7e-27 125.2 261 37.9
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 5.7e-27 125.2 183 49.7
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 5.7e-27 125.2 183 49.7
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 9.8e-27 124.4 218 43.6
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 1.7e-26 123.6 260 37.7
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 2.2e-26 123.2 261 37.5
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 2.2e-26 123.2 233 39.9
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 2.2e-26 123.2 231 41.6
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.8e-26 122.9 261 37.5
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 2.8e-26 122.9 227 42.3
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 3.7e-26 122.5 223 42.2
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 6.3e-26 121.7 187 47.6
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 6.3e-26 121.7 187 47.6
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 6.3e-26 121.7 199 44.7
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 1.1e-25 120.9 221 43.0
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 1.8e-25 120.2 226 40.7
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 3.1e-25 119.4 226 41.6
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 3.1e-25 119.4 226 41.6
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 4.1e-25 119.0 237 39.2
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 4.1e-25 119.0 231 40.7
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 5.4e-25 118.6 215 42.8
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 7.0e-25 118.2 256 39.1
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 2.7e-24 116.3 223 40.8
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 7.8e-24 114.8 240 38.8
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 7.8e-24 114.8 237 38.8
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 7.8e-24 114.8 229 39.3
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 1.3e-23 114.0 216 41.2
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 1.7e-23 113.6 188 46.3
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 2.3e-23 113.2 197 43.7
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 2.3e-23 113.2 197 43.7
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 6.6e-23 111.7 220 40.0
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 8.6e-23 111.3 204 43.1
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 2.5e-22 109.8 218 39.0
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.3e-22 108.2 228 39.5
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 7.3e-22 108.2 209 39.7
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 9.5e-22 107.8 227 39.2
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 9.5e-22 107.8 237 38.0
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.6e-21 107.1 227 39.6
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 2.8e-21 106.3 179 41.9
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 4.7e-21 105.5 222 38.7
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.8e-20 103.6 216 38.0
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 2.3e-20 103.2 218 38.5
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 2.0e-19 100.1 237 38.0
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 2.0e-19 100.1 237 38.0
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 5.7e-19 98.6 217 40.6
Hma1.2p1_0337F.1_g129430 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 4.9e-18 95.5 159 43.4
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 4.9e-18 95.5 219 37.9
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 4.9e-18 95.5 185 38.9
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.2e-17 92.8 237 36.3
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 5.4e-17 92.0 179 43.0
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 2.0e-16 90.1 222 37.4
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 3.5e-16 89.4 138 45.7
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 3.9e-15 85.9 199 37.2
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.5e-14 84.0 187 38.5
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 1.5e-14 84.0 187 38.5
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 5.6e-14 82.0 110 52.7
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 5.6e-14 82.0 192 39.6
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 7.3e-14 81.6 187 35.3
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 9.5e-14 81.3 155 43.2
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 1.6e-13 80.5 186 37.6
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 2.8e-13 79.7 186 36.0
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 4.7e-13 79.0 223 36.3
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 4.7e-13 79.0 195 35.4
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 8.0e-13 78.2 202 38.1
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 3.1e-12 76.3 247 34.0
ECA233G1390 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.6e-11 73.2 177 34.5
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 1.3e-10 70.9 191 36.1
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 4.9e-10 68.9 214 33.6
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 4.9e-10 68.9 176 37.5
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 4.9e-10 68.9 176 37.5
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 1.1e-09 67.8 220 32.3
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-09 67.8 205 34.6
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-09 67.8 205 34.6
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.1e-09 67.8 198 33.3
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 3.2e-09 66.2 201 34.3
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 5.4e-09 65.5 204 35.3
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 7.0e-09 65.1 262 32.1
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 7.0e-09 65.1 213 32.4
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.2e-08 64.3 209 33.5
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 1.3e-07 60.8 89 46.1
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 1.3e-07 60.8 70 54.3
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 2.3e-07 60.1 111 45.0
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 5.0e-07 58.9 176 31.8
Haze_13037 Corylus avellana HOM05D004568 ORTHO05D005343 6.6e-07 58.5 77 50.6
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 2.5e-06 56.6 297 23.9


User provided reference genes

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