Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 0.0e+00 1302.0 812 100.0
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 1.1e-193 681.0 870 59.0
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.7e-189 667.2 816 60.2
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 6.3e-189 665.2 864 60.6
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 2.5e-185 653.3 853 61.2
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 1.8e-183 647.1 847 57.6
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.1e-180 637.9 872 55.2
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 1.6e-179 634.0 814 60.8
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 3.5e-179 632.9 851 58.2
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 1.3e-178 630.9 842 56.2
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 1.7e-178 630.6 878 57.5
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 8.5e-178 628.2 810 56.0
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 8.5e-178 628.2 877 57.6
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 4.2e-177 625.9 874 57.2
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 1.6e-176 624.0 873 54.6
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 1.7e-173 614.0 833 58.5
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 1.1e-172 611.3 834 56.2
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 7.0e-172 608.6 816 54.5
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.2e-171 607.8 817 54.6
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 2.2e-170 603.6 840 55.6
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 5.5e-169 599.0 781 59.8
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 9.4e-169 598.2 844 54.9
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 2.1e-168 597.0 847 53.7
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.3e-167 593.6 846 54.8
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 2.3e-167 593.6 802 58.4
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 5.2e-167 592.4 851 54.1
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 2.6e-166 590.1 877 52.3
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 1.7e-165 587.4 845 54.3
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 3.7e-165 586.3 839 55.1
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 1.1e-164 584.7 832 52.6
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 2.4e-164 583.6 833 54.9
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 3.1e-164 583.2 850 53.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 2.0e-163 580.5 835 50.8
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.7e-162 577.4 854 53.2
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 5.0e-162 575.9 783 56.2
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 3.6e-160 569.7 870 51.4
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 1.4e-159 567.8 811 54.3
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 3.4e-158 563.1 824 52.8
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 7.5e-158 562.0 851 48.2
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 3.7e-157 559.7 803 54.0
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 4.9e-157 559.3 837 53.5
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 6.3e-157 558.9 870 50.7
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 2.7e-155 553.5 875 48.2
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 4.5e-155 552.7 843 48.3
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 5.6e-153 545.8 844 52.6
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 1.4e-151 541.2 774 49.1
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 1.8e-151 540.8 774 49.1
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 6.8e-151 538.9 827 52.0
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.5e-150 537.7 701 57.1
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 7.5e-150 535.4 853 46.7
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 4.9e-149 532.7 833 54.5
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 3.2e-148 530.0 770 51.4
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 1.2e-147 528.1 710 57.3
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 5.0e-146 522.7 844 49.4
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 5.0e-146 522.7 844 49.4
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.9e-145 520.8 845 49.0
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 1.2e-144 518.1 835 50.2
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 1.2e-144 518.1 754 50.5
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 1.6e-144 517.7 845 48.4
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 1.6e-144 517.7 845 48.4
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 2.8e-144 516.9 773 51.6
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 6.2e-144 515.8 875 47.0
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 1.4e-143 514.6 775 54.6
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 4.0e-143 513.1 831 49.8
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 5.2e-143 512.7 838 48.8
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.2e-142 511.5 718 53.2
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 2.0e-142 510.8 837 49.0
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 5.8e-142 509.2 756 52.2
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 5.8e-142 509.2 847 47.9
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 2.2e-141 507.3 874 43.5
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 2.2e-141 507.3 823 49.9
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 3.5e-139 500.0 834 48.3
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 7.8e-139 498.8 853 46.1
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 1.3e-138 498.0 748 50.3
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 6.6e-138 495.7 839 48.9
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 8.6e-138 495.4 830 49.9
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 8.1e-136 488.8 757 51.0
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 4.0e-135 486.5 803 48.6
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 5.8e-134 482.6 819 49.8
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 2.2e-133 480.7 820 50.2
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 2.4e-132 477.2 834 43.3
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 5.1e-130 469.5 877 47.7
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 8.6e-130 468.8 813 48.3
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 2.6e-126 457.2 803 39.7
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 1.9e-113 414.5 722 47.5
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 2.8e-112 410.6 832 40.5
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 1.5e-110 404.8 601 57.4
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 4.8e-96 356.7 537 56.4
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 4.2e-92 343.6 810 40.2
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 1.7e-85 321.6 480 56.0
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 8.5e-85 319.3 386 57.0
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 1.1e-76 292.4 652 32.7
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 1.1e-73 282.3 544 50.9
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 6.9e-71 273.1 313 58.8
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 5.0e-61 240.4 804 36.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 1.3e-56 225.7 805 38.3
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.4e-55 221.5 832 34.7
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 2.5e-52 211.5 233 49.4
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 1.5e-49 202.2 237 48.9
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 8.6e-45 186.4 227 47.1
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 1.0e-37 162.9 329 40.1
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 3.0e-29 134.8 485 33.2
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 4.4e-25 120.9 181 42.0
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 3.7e-24 117.9 174 40.8
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 3.9e-21 107.8 105 75.2
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 2.9e-16 91.7 120 48.3
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 4.6e-14 84.3 77 61.0


User provided reference genes

Program Settings