Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C915T0 Lonicera japonica HOM05D005400 ORTHO05D006668 5.7e-74 280.8 138 100.0
Dinv35292 Davidia involucrata HOM05D005400 ORTHO05D006668 2.1e-52 209.1 138 76.8
DCAR_020293 Daucus carota HOM05D005400 ORTHO05D006668 4.7e-52 208.0 131 78.6
vmacro06593 Vaccinium macrocarpon HOM05D005400 ORTHO05D006668 1.0e-51 206.8 138 77.5
QL09p011755 Quercus lobata HOM05D005400 ORTHO05D006668 1.8e-51 206.1 137 76.6
Sc13g0009410 Simmondsia chinensis HOM05D005400 ORTHO05D006668 1.8e-51 206.1 139 74.8
Atru.chr1.311 Acer truncatum HOM05D005400 ORTHO05D006668 1.1e-50 203.4 136 75.7
Cfa016337 Carpinus fangiana HOM05D005400 ORTHO05D006668 2.0e-50 202.6 137 75.2
Actinidia34175 Actinidia chinensis HOM05D005400 ORTHO05D006668 3.3e-50 201.8 138 76.1
Hma1.2p1_0142F.1_g064180 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 5.7e-50 201.1 138 74.6
Hma1.2p1_0142F.1_g064190 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 5.7e-50 201.1 138 74.6
CiPaw.05G259500 Carya illinoinensis HOM05D005400 ORTHO05D006668 7.4e-50 200.7 135 77.0
Sopen03g003730 Solanum pennellii HOM05D005400 ORTHO05D006668 9.7e-50 200.3 135 77.0
PGSC0003DMG400006589 Solanum tuberosum HOM05D005400 ORTHO05D006668 1.7e-49 199.5 135 77.0
Solyc03g007800.3 Solanum lycopersicum HOM05D005400 ORTHO05D006668 2.8e-49 198.7 135 76.3
CAN.G108.2 Capsicum annuum HOM05D005400 ORTHO05D006668 3.7e-49 198.4 135 75.6
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 3.7e-49 198.4 132 74.2
Ciclev10004177m.g Citrus clementina HOM05D005400 ORTHO05D006668 8.2e-49 197.2 137 74.5
FAN06G4050 Fragaria x ananassa HOM05D005400 ORTHO05D006668 8.2e-49 197.2 132 73.5
FAN06G5036 Fragaria x ananassa HOM05D005400 ORTHO05D006668 8.2e-49 197.2 132 73.5
Nn1g01753 Nelumbo nucifera HOM05D005400 ORTHO05D006668 1.4e-48 196.4 137 71.5
Atru.BG.163.p Acer truncatum HOM05D005400 ORTHO05D006668 1.8e-48 196.1 133 74.4
MD01G1212700 Malus domestica HOM05D005400 ORTHO05D006668 2.4e-48 195.7 137 73.0
ClCG01G000730 Citrullus lanatus HOM05D005400 ORTHO05D006668 7.0e-48 194.1 136 71.3
Eucgr.A02677 Eucalyptus grandis HOM05D005400 ORTHO05D006668 7.0e-48 194.1 138 71.7
TWI14G1289 Tripterygium wilfordii HOM05D005400 ORTHO05D006668 7.0e-48 194.1 138 70.3
PGR042G3191 Punica granatum HOM05D005400 ORTHO05D006668 9.1e-48 193.7 138 70.3
SalBow4G2614 Salvia bowleyana HOM05D005400 ORTHO05D006668 1.2e-47 193.4 137 75.2
CsaV3_5G000860 Cucumis sativus L. HOM05D005400 ORTHO05D006668 2.0e-47 192.6 136 70.6
Lsat_1_v5_gn_5_37621 Lactuca sativa HOM05D005400 ORTHO05D006668 2.6e-47 192.2 136 72.1
CANSAT21G0517 Cannabis sativa HOM05D005400 ORTHO05D006668 3.5e-47 191.8 136 70.6
Cc02_g02120 Coffea canephora HOM05D005400 ORTHO05D006668 4.5e-47 191.4 139 69.8
Oeu037127.2 Olea europaea HOM05D005400 ORTHO05D006668 4.5e-47 191.4 138 68.8
GSVIVG01028757001 Vitis vinifera HOM05D005400 ORTHO05D006668 4.5e-47 191.4 136 72.8
arahy.Tifrunner.gnm1.ann1.E9FCC2 Arachis hypogaea HOM05D005400 ORTHO05D006668 5.9e-47 191.0 136 71.3
Aqoxy5G04046 Aquilegia oxysepala HOM05D005400 ORTHO05D006668 7.7e-47 190.7 139 69.8
AL8G27410 Arabidopsis lyrata HOM05D005400 ORTHO05D006668 7.7e-47 190.7 139 70.5
AT5G52910 Arabidopsis thaliana HOM05D005400 ORTHO05D006668 1.0e-46 190.3 139 70.5
MELO3C005855.2 Cucumis melo HOM05D005400 ORTHO05D006668 1.0e-46 190.3 136 70.6
HanXRQChr05g0158761 Helianthus annuus HOM05D005400 ORTHO05D006668 1.3e-46 189.9 136 72.1
RcHm_v2.0_Chr1g0379691 Rosa chinensis HOM05D005400 ORTHO05D006668 1.3e-46 189.9 139 70.5
VMungo0720G2624 Vigna mungo HOM05D005400 ORTHO05D006668 1.3e-46 189.9 136 69.1
Sed0025455 Sechium edule HOM05D005400 ORTHO05D006668 1.7e-46 189.5 136 71.3
FvH4_7g30740 Fragaria vesca HOM05D005400 ORTHO05D006668 2.2e-46 189.1 139 69.1
Thhalv10012488m.g Eutrema salsugineum HOM05D005400 ORTHO05D006668 2.9e-46 188.7 136 71.3
Psat6g194880 Pisum sativum HOM05D005400 ORTHO05D006668 2.9e-46 188.7 135 68.9
MSTRG.27059 Avicennia marina HOM05D005400 ORTHO05D006668 5.0e-46 188.0 139 71.9
BcaB08g35655 Brassica carinata HOM05D005400 ORTHO05D006668 5.0e-46 188.0 136 70.6
Carub.0008s1311 Capsella rubella HOM05D005400 ORTHO05D006668 5.0e-46 188.0 139 69.8
Sp6g15090 Schrenkiella parvula HOM05D005400 ORTHO05D006668 5.0e-46 188.0 136 71.3
TPR.G7748 Trifolium pratense HOM05D005400 ORTHO05D006668 8.5e-46 187.2 135 68.9
Hund04816 Selenicereus undatus HOM05D005400 ORTHO05D006668 1.1e-45 186.8 135 70.4
PSO170G5128 Papaver somniferum HOM05D005400 ORTHO05D006668 1.5e-45 186.4 138 70.3
Glyma.10G227900 Glycine max HOM05D005400 ORTHO05D006668 4.2e-45 184.9 136 68.4
TAR374G0725 Trochodendron aralioides HOM05D005400 ORTHO05D006668 4.2e-45 184.9 132 71.2
Aa31LG3G9160 Aethionema arabicum HOM05D005400 ORTHO05D006668 5.5e-45 184.5 137 70.1
Manes.06G155000 Manihot esculenta HOM05D005400 ORTHO05D006668 5.5e-45 184.5 136 69.9
CARHR265900 Cardamine hirsuta HOM05D005400 ORTHO05D006668 7.2e-45 184.1 139 69.8
ECA246G1245 Erigeron canadensis HOM05D005400 ORTHO05D006668 7.2e-45 184.1 136 72.1
Phvul.007G077600 Phaseolus vulgaris HOM05D005400 ORTHO05D006668 7.2e-45 184.1 135 68.1
Glyma.20G164400 Glycine max HOM05D005400 ORTHO05D006668 1.6e-44 183.0 136 68.4
Peaxi162Scf00904g00467 Petunia axillaris HOM05D005400 ORTHO05D006668 1.6e-44 183.0 125 75.2
Migut.F00258 Erythranthe guttata HOM05D005400 ORTHO05D006668 2.1e-44 182.6 138 68.8
BraA10t43124Z Brassica rapa HOM05D005400 ORTHO05D006668 2.7e-44 182.2 136 68.4
Lalb_Chr06g0161421 Lupinus albus HOM05D005400 ORTHO05D006668 3.6e-44 181.8 135 68.9
Medtr1g099370 Medicago truncatula HOM05D005400 ORTHO05D006668 3.6e-44 181.8 135 65.9
Thecc.03G189100 Theobroma cacao HOM05D005400 ORTHO05D006668 3.6e-44 181.8 139 66.9
AUR62031458 Chenopodium quinoa HOM05D005400 ORTHO05D006668 4.7e-44 181.4 134 68.7
A10p10420 Brassica napus HOM05D005400 ORTHO05D006668 8.0e-44 180.6 136 67.6
Lj5g0007861 Lotus japonicus HOM05D005400 ORTHO05D006668 1.0e-43 180.3 135 66.7
AUR62021073 Chenopodium quinoa HOM05D005400 ORTHO05D006668 2.3e-43 179.1 134 67.9
Gohir.D12G254600 Gossypium hirsutum HOM05D005400 ORTHO05D006668 3.0e-43 178.7 136 68.4
THA.LOC104811936 Tarenaya hassleriana HOM05D005400 ORTHO05D006668 3.0e-43 178.7 136 67.6
arahy.Tifrunner.gnm1.ann1.B3EP0P Arachis hypogaea HOM05D005400 ORTHO05D006668 4.0e-43 178.3 151 62.9
SGA_v2.0_scaffold44G16767 Striga asiatica HOM05D005400 ORTHO05D006668 4.0e-43 178.3 138 65.9
Sabra15G0021300 Salix brachista HOM05D005400 ORTHO05D006668 5.2e-43 177.9 138 65.9
CSS0023888 Camellia sinensis var. sinensis HOM05D005400 ORTHO05D006668 6.8e-43 177.6 131 73.3
Gorai.008G272300 Gossypium raimondii HOM05D005400 ORTHO05D006668 8.8e-43 177.2 136 67.6
Duzib205G0693 Durio zibethinus HOM05D005400 ORTHO05D006668 1.2e-42 176.8 136 67.6
BcaC04g20520 Brassica carinata HOM05D005400 ORTHO05D006668 1.5e-42 176.4 137 67.2
C09p42650 Brassica napus HOM05D005400 ORTHO05D006668 1.5e-42 176.4 137 67.2
BolC9t57141H Brassica oleracea HOM05D005400 ORTHO05D006668 1.5e-42 176.4 137 67.2
Potri.015G024300 Populus trichocarpa HOM05D005400 ORTHO05D006668 2.0e-42 176.0 138 65.2
CDE03G0155 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 2.6e-42 175.6 139 61.9
Sabra15G0018800 Salix brachista HOM05D005400 ORTHO05D006668 2.6e-42 175.6 138 65.2
FAN01G1802 Fragaria x ananassa HOM05D005400 ORTHO05D006668 7.5e-42 174.1 123 68.3
EL10Ac3g05372 Beta vulgaris HOM05D005400 ORTHO05D006668 2.2e-41 172.6 134 65.7
Cpa.g.sc3.16 Carica papaya HOM05D005400 ORTHO05D006668 2.2e-41 172.6 124 72.6
COL.COLO4_30250 Corchorus olitorius HOM05D005400 ORTHO05D006668 2.2e-41 172.6 139 64.7
MBI06_g29320_MAGBIO Magnolia biondii HOM05D005400 ORTHO05D006668 2.2e-41 172.6 139 64.7
Rhsim03G0196700 Rhododendron simsii HOM05D005400 ORTHO05D006668 2.7e-39 165.6 112 76.8
FAN10G3192 Fragaria x ananassa HOM05D005400 ORTHO05D006668 7.7e-39 164.1 144 61.8
Os05g0210500 Oryza sativa ssp. japonica HOM05D005400 ORTHO05D006668 2.9e-38 162.2 134 61.2
Haze_00088 Corylus avellana HOM05D005400 ORTHO05D006668 3.8e-38 161.8 130 66.9
HPP92_007648 Vanilla planifolia HOM05D005400 ORTHO05D006668 3.8e-38 161.8 139 57.6
Zm00001eb296310 Zea mays HOM05D005400 ORTHO05D006668 8.5e-38 160.6 134 60.4
ATR0721G161 Amborella trichopoda HOM05D005400 ORTHO05D006668 2.7e-36 155.6 137 56.9
Ca_10700_v3 Cicer arietinum L. HOM05D005400 ORTHO05D006668 6.1e-36 154.5 133 61.7
Nitab4.5_0001748g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 5.2e-35 151.4 125 65.6
SEGI_11166 Sequoiadendron giganteum HOM05D005400 ORTHO05D006668 8.8e-35 150.6 136 54.4
Nitab4.5_0002340g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 5.4e-32 141.4 125 62.4
Pp3c8_21590 Physcomitrium patens HOM05D005400 ORTHO05D006668 2.8e-28 129.0 135 45.9
CDE04G2330 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 3.6e-28 128.6 106 58.5
AagrBONN_evm.TU.Sc2ySwM_362.1589 Anthoceros agrestis HOM05D005400 ORTHO05D006668 3.0e-27 125.6 135 49.6
CBR_g32347 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-26 123.6 135 46.7
Mapoly0089s0007 Marchantia polymorpha HOM05D005400 ORTHO05D006668 1.4e-24 116.7 135 40.0
arahy.Tifrunner.gnm1.ann1.FE5R37 Arachis hypogaea HOM05D005400 ORTHO05D006668 2.0e-23 112.8 97 59.8
SHI13743 Sapria himalayana HOM05D005400 ORTHO05D006668 5.9e-23 111.3 75 68.0
unitig_46.g18810 Utricularia gibba HOM05D005400 ORTHO05D006668 4.3e-21 105.1 104 51.9
arahy.Tifrunner.gnm1.ann1.3F6PU2 Arachis hypogaea HOM05D005400 ORTHO05D006668 1.4e-19 100.1 104 52.9
SMO353G0144 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 2.0e-18 96.3 138 37.0
arahy.Tifrunner.gnm1.ann1.58WBAP Arachis hypogaea HOM05D005400 ORTHO05D006668 3.2e-16 89.0 108 50.0
FAN06G3414 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.0e-14 84.0 115 45.2
FAN06G1858 Fragaria x ananassa HOM05D005400 ORTHO05D006668 6.6e-14 81.3 120 44.2
Prupe.2G304900 Prunus persica HOM05D005400 ORTHO05D006668 2.3e-11 72.8 48 75.0
Gohir.A12G254700 Gossypium hirsutum HOM05D005400 ORTHO05D006668 5.2e-11 71.6 45 75.6
Ah.07g206200 Amaranthus hybridus HOM05D005400 ORTHO05D006668 4.4e-10 68.6 53 64.2
Cre06.g284850 Chlamydomonas reinhardtii HOM05D005400 ORTHO05D006668 4.4e-10 68.6 102 38.2
SMO171G0132 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 5.8e-10 68.2 77 41.6
SHI13742 Sapria himalayana HOM05D005400 ORTHO05D006668 9.8e-10 67.4 50 64.0
PRCOL_00002573 Prasinoderma coloniale HOM05D005400 ORTHO05D006668 3.9e-06 55.5 140 28.6


User provided reference genes

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