Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 7.5e-135 483.8 234 100.0
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 7.3e-98 360.9 211 82.0
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 3.6e-97 358.6 209 83.3
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 4.7e-97 358.2 193 89.1
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 8.1e-97 357.5 221 78.7
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 1.4e-96 356.7 220 77.7
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 4.0e-96 355.1 225 77.8
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 4.0e-96 355.1 207 83.1
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 5.2e-96 354.8 219 79.0
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.2e-95 353.6 205 82.4
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 1.5e-95 353.2 207 82.1
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 2.0e-95 352.8 204 84.3
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 3.4e-95 352.1 217 77.9
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 4.4e-95 351.7 204 84.3
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 5.8e-95 351.3 225 76.0
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 7.6e-95 350.9 220 76.8
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 7.6e-95 350.9 205 82.4
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 9.9e-95 350.5 223 75.8
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 9.9e-95 350.5 190 88.9
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.7e-94 349.7 219 78.1
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.2e-94 349.4 219 77.6
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 2.2e-94 349.4 208 80.8
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 2.9e-94 349.0 192 87.0
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 2.9e-94 349.0 208 80.3
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 3.8e-94 348.6 238 73.9
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 4.9e-94 348.2 207 81.2
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.1e-93 347.1 219 77.2
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.1e-93 347.1 219 77.2
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 1.4e-93 346.7 216 78.2
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.4e-93 346.7 204 81.9
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 1.4e-93 346.7 223 76.2
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 2.4e-93 345.9 190 85.8
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 4.1e-93 345.1 216 77.8
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 5.4e-93 344.7 206 80.1
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 7.1e-93 344.4 216 77.8
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 9.2e-93 344.0 212 78.3
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 9.2e-93 344.0 216 77.8
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 9.2e-93 344.0 219 76.3
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 2.7e-92 342.4 219 76.3
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.0e-92 341.3 208 79.8
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.0e-92 341.3 208 79.8
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 7.8e-92 340.9 221 74.7
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 7.8e-92 340.9 205 79.5
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 1.0e-91 340.5 192 84.9
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 2.3e-91 339.3 192 85.9
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 2.3e-91 339.3 208 79.3
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 5.1e-91 338.2 231 73.6
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 1.1e-90 337.0 206 79.6
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 2.5e-90 335.9 209 77.5
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 3.3e-90 335.5 204 79.4
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 3.3e-90 335.5 213 77.0
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 3.3e-90 335.5 212 76.9
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 1.2e-89 333.6 202 79.7
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 1.2e-89 333.6 229 72.9
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 2.1e-89 332.8 194 79.9
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 2.1e-89 332.8 193 82.9
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 2.8e-89 332.4 195 79.0
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 2.8e-89 332.4 198 80.3
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 6.2e-89 331.3 213 76.1
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 8.1e-89 330.9 215 76.3
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.1e-88 330.5 195 80.0
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.4e-88 330.1 212 74.5
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 1.4e-88 330.1 206 77.2
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 1.8e-88 329.7 208 76.4
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 2.4e-88 329.3 215 74.9
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 5.2e-88 328.2 191 84.3
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 5.2e-88 328.2 213 76.1
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 5.2e-88 328.2 195 79.5
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 5.8e-87 324.7 193 80.3
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 7.6e-87 324.3 206 77.2
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 1.3e-86 323.6 216 74.1
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 1.3e-86 323.6 211 75.8
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 2.2e-86 322.8 225 72.0
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 2.9e-86 322.4 216 73.6
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 6.4e-86 321.2 221 71.9
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 6.4e-86 321.2 190 83.2
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 8.4e-86 320.9 192 78.6
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 1.4e-85 320.1 195 79.0
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.4e-85 319.3 220 70.9
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.4e-85 319.3 192 78.1
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 2.4e-85 319.3 195 76.4
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 4.2e-85 318.5 225 71.6
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 4.2e-85 318.5 221 71.5
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 4.2e-85 318.5 189 80.4
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 7.1e-85 317.8 205 76.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 7.1e-85 317.8 205 75.1
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 7.1e-85 317.8 205 76.6
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 7.1e-85 317.8 220 70.5
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 9.3e-85 317.4 214 74.3
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 1.2e-84 317.0 215 73.5
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 1.2e-84 317.0 205 76.1
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.6e-84 316.6 209 74.6
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 1.6e-84 316.6 201 78.1
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 1.6e-84 316.6 201 78.1
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 2.1e-84 316.2 202 76.7
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 2.1e-84 316.2 206 75.7
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 2.1e-84 316.2 206 75.7
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 2.7e-84 315.8 205 74.6
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 3.5e-84 315.5 205 74.6
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 4.6e-84 315.1 215 74.4
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 1.1e-82 310.5 200 76.0
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 1.1e-82 310.5 201 77.6
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 2.5e-82 309.3 202 75.2
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 7.3e-82 307.8 218 70.2
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 8.1e-81 304.3 225 68.4
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 1.1e-80 303.9 189 77.2
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 1.3e-78 297.0 213 68.5
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 2.9e-78 295.8 190 75.8
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-78 294.7 191 76.4
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 3.9e-75 285.4 189 73.0
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 1.3e-73 280.4 185 74.1
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 4.9e-70 268.5 188 67.6
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 1.2e-68 263.8 207 65.7
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.6e-68 263.5 198 67.7
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 6.0e-68 261.5 183 69.4
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 6.7e-67 258.1 165 72.1
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 2.4e-56 223.0 180 59.4
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 2.0e-55 219.9 190 61.6
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 3.2e-53 212.6 143 72.7
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 1.3e-51 207.2 143 72.0
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 3.7e-49 199.1 167 63.5
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 3.8e-46 189.1 131 73.3
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 3.8e-46 189.1 167 61.7
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 5.5e-45 185.3 149 64.4
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 6.7e-43 178.3 177 55.9
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 2.6e-42 176.4 101 84.2
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 7.4e-42 174.9 190 53.2
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 1.5e-39 167.2 167 50.3
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 1.0e-38 164.5 112 73.2
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 3.2e-37 159.5 107 74.8
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 3.0e-35 152.9 167 55.7
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 3.3e-34 149.4 142 56.3
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 7.7e-31 138.3 107 66.4
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 1.1e-29 134.4 127 58.3
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 6.7e-27 125.2 150 44.7
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 9.1e-24 114.8 139 48.2
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 2.2e-22 110.2 140 47.1
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 3.2e-21 106.3 140 45.7
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 2.3e-19 100.1 143 45.5
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 4.8e-17 92.4 88 59.1
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 2.3e-14 83.6 184 32.1
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 7.5e-10 68.6 37 89.2


User provided reference genes

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