Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C823T10 Lonicera japonica HOM05D000654 ORTHO05D002711 3.7e-91 338.2 172 100.0
Lj4A152G33 Lonicera japonica HOM05D000654 ORTHO05D002711 3.5e-49 198.7 179 66.5
Dinv26842 Davidia involucrata HOM05D000654 ORTHO05D002711 5.7e-23 111.7 181 43.6
Cc07_g06180 Coffea canephora HOM05D000654 ORTHO05D002711 1.7e-19 100.1 167 42.5
CSS0004077 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 6.5e-19 98.2 166 43.4
CiPaw.01G015400 Carya illinoinensis HOM05D000654 ORTHO05D002711 4.7e-17 92.0 190 37.4
TAR625G0928 Trochodendron aralioides HOM05D000654 ORTHO05D002711 3.0e-16 89.4 172 36.0
CSS0018882 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 5.7e-15 85.1 142 43.0
DCAR_025746 Daucus carota HOM05D000654 ORTHO05D002711 1.7e-14 83.6 175 37.1
Dinv30010 Davidia involucrata HOM05D000654 ORTHO05D002711 3.1e-13 79.3 110 50.0
vmacro17961 Vaccinium macrocarpon HOM05D000654 ORTHO05D002711 4.1e-13 79.0 181 38.1
Ciclev10024767m.g Citrus clementina HOM05D000654 ORTHO05D002711 1.5e-12 77.0 189 34.9
Potri.005G140300 Populus trichocarpa HOM05D000654 ORTHO05D002711 2.0e-12 76.6 166 38.0
FvH4_1g16340 Fragaria vesca HOM05D000654 ORTHO05D002711 4.5e-12 75.5 187 34.2
Cfa004040 Carpinus fangiana HOM05D000654 ORTHO05D002711 5.9e-12 75.1 195 35.9
Gorai.007G215800 Gossypium raimondii HOM05D000654 ORTHO05D002711 1.0e-11 74.3 153 39.2
FAN23G2009 Fragaria x ananassa HOM05D000654 ORTHO05D002711 1.3e-11 73.9 191 35.1
FAN28G1367 Fragaria x ananassa HOM05D000654 ORTHO05D002711 1.3e-11 73.9 162 37.0
Nitab4.5_0001221g0040 Nicotiana tabacum HOM05D000654 ORTHO05D002711 1.3e-11 73.9 188 34.6
QL06p040712 Quercus lobata HOM05D000654 ORTHO05D002711 1.3e-11 73.9 192 32.8
GSVIVG01022086001 Vitis vinifera HOM05D000654 ORTHO05D002711 1.3e-11 73.9 183 33.3
FAN26G1873 Fragaria x ananassa HOM05D000654 ORTHO05D002711 1.7e-11 73.6 162 37.0
MD15G1286300 Malus domestica HOM05D000654 ORTHO05D002711 1.7e-11 73.6 174 35.1
CSS0019799 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 2.2e-11 73.2 158 34.8
FAN19G0868 Fragaria x ananassa HOM05D000654 ORTHO05D002711 2.2e-11 73.2 184 35.3
Gohir.D11G201400 Gossypium hirsutum HOM05D000654 ORTHO05D002711 2.2e-11 73.2 153 38.6
Manes.12G106300 Manihot esculenta HOM05D000654 ORTHO05D002711 2.2e-11 73.2 172 33.7
Potri.007G046100 Populus trichocarpa HOM05D000654 ORTHO05D002711 3.8e-11 72.4 165 36.4
MD02G1175900 Malus domestica HOM05D000654 ORTHO05D002711 5.0e-11 72.0 166 39.2
Actinidia16473 Actinidia chinensis HOM05D000654 ORTHO05D002711 6.5e-11 71.6 154 39.6
RcHm_v2.0_Chr2g0106201 Rosa chinensis HOM05D000654 ORTHO05D002711 1.4e-10 70.5 159 37.1
Rhsim08G0099300 Rhododendron simsii HOM05D000654 ORTHO05D002711 1.9e-10 70.1 178 37.6
Nn1g04786 Nelumbo nucifera HOM05D000654 ORTHO05D002711 2.5e-10 69.7 193 35.8
Nn5g30356 Nelumbo nucifera HOM05D000654 ORTHO05D002711 3.2e-10 69.3 183 36.1
QL11p034868 Quercus lobata HOM05D000654 ORTHO05D002711 4.2e-10 68.9 179 34.6
CANSAT25G0706 Cannabis sativa HOM05D000654 ORTHO05D002711 5.5e-10 68.6 188 36.7
CiPaw.02G007300 Carya illinoinensis HOM05D000654 ORTHO05D002711 7.2e-10 68.2 164 36.6
Peaxi162Scf00549g00019 Petunia axillaris HOM05D000654 ORTHO05D002711 7.2e-10 68.2 175 38.3
COL.COLO4_24562 Corchorus olitorius HOM05D000654 ORTHO05D002711 1.6e-09 67.0 189 33.9
PGSC0003DMG400004007 Solanum tuberosum HOM05D000654 ORTHO05D002711 1.6e-09 67.0 177 35.6
Cfa004546 Carpinus fangiana HOM05D000654 ORTHO05D002711 2.1e-09 66.6 175 32.6
Thecc.01G060100 Theobroma cacao HOM05D000654 ORTHO05D002711 2.1e-09 66.6 197 34.0
ECA232G1682 Erigeron canadensis HOM05D000654 ORTHO05D002711 6.1e-09 65.1 155 38.7
Sopen02g037730 Solanum pennellii HOM05D000654 ORTHO05D002711 1.0e-08 64.3 153 39.9
MSTRG.15381 Avicennia marina HOM05D000654 ORTHO05D002711 1.4e-08 63.9 177 29.9
arahy.Tifrunner.gnm1.ann1.X4GZC6 Arachis hypogaea HOM05D000654 ORTHO05D002711 1.8e-08 63.5 193 33.7
Solyc02g093160.3 Solanum lycopersicum HOM05D000654 ORTHO05D002711 1.8e-08 63.5 176 36.4
arahy.Tifrunner.gnm1.ann1.RQMB8Y Arachis hypogaea HOM05D000654 ORTHO05D002711 2.3e-08 63.2 160 36.2
TWI73G1036 Tripterygium wilfordii HOM05D000654 ORTHO05D002711 2.3e-08 63.2 194 30.4
Actinidia00426 Actinidia chinensis HOM05D000654 ORTHO05D002711 3.0e-08 62.8 176 36.9
Manes.13G121000 Manihot esculenta HOM05D000654 ORTHO05D002711 3.0e-08 62.8 173 34.7
Nitab4.5_0002765g0080 Nicotiana tabacum HOM05D000654 ORTHO05D002711 3.9e-08 62.4 185 30.8
Prupe.8G129200 Prunus persica HOM05D000654 ORTHO05D002711 3.9e-08 62.4 188 32.4
PGR102G3371 Punica granatum HOM05D000654 ORTHO05D002711 3.9e-08 62.4 181 33.7
Dinv42171 Davidia involucrata HOM05D000654 ORTHO05D002711 6.7e-08 61.6 112 40.2
SalBow5G1172 Salvia bowleyana HOM05D000654 ORTHO05D002711 1.1e-07 60.8 169 35.5
Eucgr.H02071 Eucalyptus grandis HOM05D000654 ORTHO05D002711 2.0e-07 60.1 190 30.5
AUR62001903 Chenopodium quinoa HOM05D000654 ORTHO05D002711 2.6e-07 59.7 166 30.7
Actinidia12866 Actinidia chinensis HOM05D000654 ORTHO05D002711 3.3e-07 59.3 116 44.0
Ah.03g145390 Amaranthus hybridus HOM05D000654 ORTHO05D002711 4.4e-07 58.9 130 35.4
CiPaw.06G171400 Carya illinoinensis HOM05D000654 ORTHO05D002711 4.4e-07 58.9 177 31.6
Eucgr.H01691 Eucalyptus grandis HOM05D000654 ORTHO05D002711 4.4e-07 58.9 190 30.5
AUR62003909 Chenopodium quinoa HOM05D000654 ORTHO05D002711 7.4e-07 58.2 166 29.5
PSO675G1061 Papaver somniferum HOM05D000654 ORTHO05D002711 7.4e-07 58.2 200 30.5
Psat2g168560 Pisum sativum HOM05D000654 ORTHO05D002711 7.4e-07 58.2 187 29.4
Actinidia12934 Actinidia chinensis HOM05D000654 ORTHO05D002711 1.7e-06 57.0 176 35.8
Peaxi162Scf00016g02037 Petunia axillaris HOM05D000654 ORTHO05D002711 1.7e-06 57.0 100 34.0
VMungo1215G0018 Vigna mungo HOM05D000654 ORTHO05D002711 1.7e-06 57.0 160 32.5
CANSAT25G1866 Cannabis sativa HOM05D000654 ORTHO05D002711 2.8e-06 56.2 190 31.1
Hund13539 Selenicereus undatus HOM05D000654 ORTHO05D002711 2.8e-06 56.2 182 35.7
Duzib147G1504 Durio zibethinus HOM05D000654 ORTHO05D002711 3.7e-06 55.8 193 33.7
Sc16g0004590 Simmondsia chinensis HOM05D000654 ORTHO05D002711 3.7e-06 55.8 167 33.5
GSVIVG01031711001 Vitis vinifera HOM05D000654 ORTHO05D002711 3.7e-06 55.8 106 38.7
Oeu017453.2 Olea europaea HOM05D000654 ORTHO05D002711 4.8e-06 55.5 194 29.9
Lj4g0027816 Lotus japonicus HOM05D000654 ORTHO05D002711 8.2e-06 54.7 186 32.3
MD05G1084800 Malus domestica HOM05D000654 ORTHO05D002711 8.2e-06 54.7 183 33.3


User provided reference genes

Program Settings