Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 6.2e-269 930.2 479 100.0
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.5e-259 899.0 489 95.9
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 6.4e-165 584.7 533 61.7
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.9e-157 559.3 536 59.0
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 4.9e-157 558.5 506 61.7
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 8.3e-157 557.8 536 58.4
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 2.4e-156 556.2 510 61.6
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.0e-151 538.9 508 59.4
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.7e-149 533.5 516 59.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 8.4e-149 531.2 528 58.3
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.1e-147 526.6 516 57.6
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 3.5e-147 525.8 500 60.4
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 1.1e-145 520.8 540 57.2
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.2e-144 517.3 509 58.7
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.6e-144 516.9 531 56.3
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 3.6e-144 515.8 509 57.8
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.6e-144 515.8 534 56.6
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 8.1e-144 514.6 501 59.3
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 2.4e-143 513.1 531 56.5
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.0e-142 510.0 499 59.3
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 4.4e-142 508.8 493 58.6
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 5.8e-142 508.4 503 57.7
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 7.6e-142 508.1 514 57.2
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 9.9e-142 507.7 539 56.2
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.7e-141 506.9 513 56.7
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 8.4e-141 504.6 501 59.3
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.4e-140 503.8 499 58.5
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 9.3e-140 501.1 533 54.6
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.1e-139 500.0 503 57.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.5e-137 493.8 535 54.6
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.3e-137 492.7 506 56.1
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.8e-136 489.6 518 55.8
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 5.3e-135 485.3 497 57.7
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 7.6e-134 481.5 508 55.7
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 9.9e-134 481.1 494 55.9
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 9.9e-134 481.1 531 53.3
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 9.9e-134 481.1 506 56.9
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.7e-133 480.3 509 56.0
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.7e-133 480.3 586 50.5
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.9e-133 479.6 520 54.8
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.8e-133 479.2 509 55.8
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 3.8e-133 479.2 509 55.8
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-132 477.2 498 56.2
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.4e-132 476.5 496 56.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.2e-132 476.1 496 56.5
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.1e-132 474.9 496 56.5
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.0e-130 469.5 528 54.4
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 3.9e-130 469.2 529 53.9
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.5e-129 467.2 500 56.0
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 2.4e-127 459.9 531 53.1
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.2e-126 457.6 507 54.0
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.2e-126 457.6 501 53.3
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 3.4e-126 456.1 544 51.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.4e-126 456.1 464 58.2
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.4e-126 456.1 464 58.2
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.2e-125 453.4 530 52.8
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.8e-125 452.6 503 53.5
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.1e-124 451.1 537 51.4
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.4e-124 450.7 494 52.4
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.6e-123 445.7 511 52.3
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.8e-122 443.7 343 69.4
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 6.7e-122 441.8 492 54.5
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 6.7e-122 441.8 484 54.3
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.9e-121 440.3 532 51.1
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.3e-121 439.5 493 52.9
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.3e-120 437.6 528 51.7
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.6e-120 437.2 460 54.1
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 2.1e-120 436.8 520 50.8
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 5.8e-118 428.7 488 52.3
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.8e-117 426.0 485 53.0
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.5e-117 425.2 477 53.0
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.2e-115 421.0 495 49.3
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.2e-115 421.0 520 50.8
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 2.1e-115 420.2 498 52.0
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 2.3e-114 416.8 414 57.5
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 4.8e-112 409.1 536 49.4
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.9e-109 399.8 498 50.4
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 7.9e-107 391.7 505 48.1
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.9e-107 391.7 406 57.9
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 6.7e-106 388.7 484 50.6
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.1e-103 381.3 531 47.1
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.6e-102 376.7 437 50.6
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 7.7e-102 375.2 490 49.4
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 8.5e-101 371.7 499 48.1
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 4.2e-100 369.4 482 49.0
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.8e-98 364.0 325 63.1
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.8e-98 364.0 465 49.0
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.4e-95 354.4 516 44.4
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.1e-95 353.2 502 45.4
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.2e-92 343.2 305 60.0
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 3.0e-90 336.7 473 46.5
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 9.1e-87 325.1 417 50.4
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.0e-86 323.9 482 44.4
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 4.4e-81 306.2 473 42.9
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 9.7e-81 305.1 496 42.5
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.1e-79 300.1 298 57.0
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 5.0e-77 292.7 238 66.8
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 5.5e-76 289.3 486 40.1
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 8.0e-75 285.4 505 41.4
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.3e-72 278.1 469 41.2
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 2.8e-72 276.9 494 40.5
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 7.0e-71 272.3 564 37.2
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.0e-66 258.5 514 37.9
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 3.0e-58 230.3 499 35.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 6.8e-58 229.2 561 34.2
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 5.7e-57 226.1 336 46.1
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.0e-42 176.8 217 49.8
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 8.9e-42 175.6 514 30.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 2.4e-39 167.5 141 66.0
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 3.0e-37 160.6 517 28.4
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.2e-35 155.2 597 28.1
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 5.2e-34 149.8 168 48.2
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 8.4e-24 115.9 81 71.6
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 4.5e-09 67.0 115 36.5
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 6.4e-08 63.2 139 38.1
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 8.4e-08 62.8 56 58.9
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 7.9e-06 56.2 66 51.5


User provided reference genes

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