Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C759T1 Lonicera japonica HOM05D000021 ORTHO05D000010 2.2e-31 138.3 67 100.0
Lj3C776G0 Lonicera japonica HOM05D000021 ORTHO05D000010 6.0e-29 130.2 67 92.5
Lj4C66T10 Lonicera japonica HOM05D000021 ORTHO05D000010 1.1e-22 109.4 67 82.1
CiPaw.15G049100 Carya illinoinensis HOM05D000021 ORTHO05D000010 3.9e-12 74.3 59 59.3
QL03p022844 Quercus lobata HOM05D000021 ORTHO05D000010 3.3e-11 71.2 51 66.7
QL02p002998 Quercus lobata HOM05D000021 ORTHO05D000010 5.6e-11 70.5 51 64.7
QL02p002923 Quercus lobata HOM05D000021 ORTHO05D000010 3.7e-10 67.8 58 58.6
QL02p003134 Quercus lobata HOM05D000021 ORTHO05D000010 3.7e-10 67.8 58 58.6
TAR381G0941 Trochodendron aralioides HOM05D000021 ORTHO05D000010 3.7e-10 67.8 67 49.3
TAR622G0023 Trochodendron aralioides HOM05D000021 ORTHO05D000010 3.7e-10 67.8 67 47.8
MBI10_g08052_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.2e-10 67.0 48 60.4
CSS0037605 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.1e-09 66.2 56 58.9
Potri.005G037400 Populus trichocarpa HOM05D000021 ORTHO05D000010 3.1e-09 64.7 55 54.5
Actinidia10174 Actinidia chinensis HOM05D000021 ORTHO05D000010 5.3e-09 63.9 59 52.5
Gohir.D01G108800 Gossypium hirsutum HOM05D000021 ORTHO05D000010 6.9e-09 63.5 56 50.0
Potri.004G060100 Populus trichocarpa HOM05D000021 ORTHO05D000010 6.9e-09 63.5 43 67.4
Cc00_g13190 Coffea canephora HOM05D000021 ORTHO05D000010 9.0e-09 63.2 53 52.8
Dinv39254 Davidia involucrata HOM05D000021 ORTHO05D000010 9.0e-09 63.2 41 65.9
QL02p003154 Quercus lobata HOM05D000021 ORTHO05D000010 9.0e-09 63.2 54 57.4
Rhsim06G0058300 Rhododendron simsii HOM05D000021 ORTHO05D000010 9.0e-09 63.2 63 55.6
Oeu057261.1 Olea europaea HOM05D000021 ORTHO05D000010 1.2e-08 62.8 57 52.6
vmacro21470 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.2e-08 62.8 51 56.9
Dinv35910 Davidia involucrata HOM05D000021 ORTHO05D000010 1.5e-08 62.4 52 59.6
Gorai.002G133000 Gossypium raimondii HOM05D000021 ORTHO05D000010 2.0e-08 62.0 56 48.2
vmacro21467 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.0e-08 62.0 61 54.1
Cfa018029 Carpinus fangiana HOM05D000021 ORTHO05D000010 2.6e-08 61.6 49 57.1
CiPaw.15G049000 Carya illinoinensis HOM05D000021 ORTHO05D000010 3.4e-08 61.2 52 57.7
CiPaw.15G048800 Carya illinoinensis HOM05D000021 ORTHO05D000010 4.5e-08 60.8 58 51.7
Gohir.A01G121300 Gossypium hirsutum HOM05D000021 ORTHO05D000010 4.5e-08 60.8 56 48.2
CAN.G660.19 Capsicum annuum HOM05D000021 ORTHO05D000010 5.8e-08 60.5 57 50.9
Thecc.08G094300 Theobroma cacao HOM05D000021 ORTHO05D000010 5.8e-08 60.5 65 46.2
Duzib093G0487 Durio zibethinus HOM05D000021 ORTHO05D000010 7.6e-08 60.1 46 52.2
Peaxi162Scf00683g00460 Petunia axillaris HOM05D000021 ORTHO05D000010 7.6e-08 60.1 49 57.1
Manes.04G008600 Manihot esculenta HOM05D000021 ORTHO05D000010 1.0e-07 59.7 54 50.0
HanXRQChr11g0345601 Helianthus annuus HOM05D000021 ORTHO05D000010 1.7e-07 58.9 61 50.8
Rhsim06G0058200 Rhododendron simsii HOM05D000021 ORTHO05D000010 2.2e-07 58.5 51 54.9
HanXRQChr11g0331851 Helianthus annuus HOM05D000021 ORTHO05D000010 2.9e-07 58.2 59 49.2
vmacro21468 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.9e-07 58.2 49 61.2
RcHm_v2.0_Chr5g0066001 Rosa chinensis HOM05D000021 ORTHO05D000010 4.9e-07 57.4 51 52.9
CiPaw.15G048900 Carya illinoinensis HOM05D000021 ORTHO05D000010 6.5e-07 57.0 54 51.9
vmacro21469 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.1e-06 56.2 46 58.7
Manes.11G156900 Manihot esculenta HOM05D000021 ORTHO05D000010 1.4e-06 55.8 54 46.3
Sabra05G0038700 Salix brachista HOM05D000021 ORTHO05D000010 1.4e-06 55.8 48 54.2
Gorai.002G131000 Gossypium raimondii HOM05D000021 ORTHO05D000010 1.9e-06 55.5 56 46.4
COL.COLO4_28566 Corchorus olitorius HOM05D000021 ORTHO05D000010 2.5e-06 55.1 54 50.0
MD08G1090900 Malus domestica HOM05D000021 ORTHO05D000010 2.5e-06 55.1 42 54.8
PSO210G7587 Papaver somniferum HOM05D000021 ORTHO05D000010 2.5e-06 55.1 48 50.0
GSVIVG01009394001 Vitis vinifera HOM05D000021 ORTHO05D000010 2.5e-06 55.1 59 45.8
MD15G1074900 Malus domestica HOM05D000021 ORTHO05D000010 3.2e-06 54.7 45 53.3
PSO447G0162 Papaver somniferum HOM05D000021 ORTHO05D000010 3.2e-06 54.7 48 47.9
MELO3C010825.2 Cucumis melo HOM05D000021 ORTHO05D000010 4.2e-06 54.3 50 50.0
Nn1g04225 Nelumbo nucifera HOM05D000021 ORTHO05D000010 4.2e-06 54.3 35 60.0
TWI56G0182 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 4.2e-06 54.3 52 42.3
TWI56G0751 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 4.2e-06 54.3 39 56.4
TWI56G0871 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 7.1e-06 53.5 52 42.3


User provided reference genes

Program Settings