Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C693T22 Lonicera japonica HOM05D002663 ORTHO05D002988 6.2e-61 237.3 119 100.0
Lj3A693G73 Lonicera japonica HOM05D002663 ORTHO05D002988 1.0e-34 150.2 82 95.1
DCAR_024256 Daucus carota HOM05D002663 ORTHO05D002988 4.6e-32 141.4 82 86.6
Gohir.D01G023100 Gossypium hirsutum HOM05D002663 ORTHO05D002988 1.0e-31 140.2 82 82.9
Glyma.02G005200 Glycine max HOM05D002663 ORTHO05D002988 1.3e-31 139.8 82 85.4
QL06p018104 Quercus lobata HOM05D002663 ORTHO05D002988 6.7e-31 137.5 81 82.7
Manes.03G163800 Manihot esculenta HOM05D002663 ORTHO05D002988 8.7e-31 137.1 82 82.9
Nn1g02781 Nelumbo nucifera HOM05D002663 ORTHO05D002988 8.7e-31 137.1 82 82.9
Atru.chr4.2053 Acer truncatum HOM05D002663 ORTHO05D002988 1.1e-30 136.7 82 84.1
Aqoxy2G03650 Aquilegia oxysepala HOM05D002663 ORTHO05D002988 1.1e-30 136.7 82 84.1
Ca_12013_v3 Cicer arietinum L. HOM05D002663 ORTHO05D002988 1.5e-30 136.3 82 82.9
Gorai.002G025500 Gossypium raimondii HOM05D002663 ORTHO05D002988 1.5e-30 136.3 82 80.5
Medtr1g042730 Medicago truncatula HOM05D002663 ORTHO05D002988 1.5e-30 136.3 82 82.9
Thecc.04G256100 Theobroma cacao HOM05D002663 ORTHO05D002988 1.5e-30 136.3 82 84.1
Cfa022963 Carpinus fangiana HOM05D002663 ORTHO05D002988 1.9e-30 136.0 82 82.9
VMungo0720G1673 Vigna mungo HOM05D002663 ORTHO05D002988 1.9e-30 136.0 79 84.8
COL.COLO4_15882 Corchorus olitorius HOM05D002663 ORTHO05D002988 2.5e-30 135.6 79 83.5
Phvul.007G274000 Phaseolus vulgaris HOM05D002663 ORTHO05D002988 2.5e-30 135.6 82 82.9
vmacro15444 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 2.5e-30 135.6 82 82.9
Eucgr.H03041 Eucalyptus grandis HOM05D002663 ORTHO05D002988 3.3e-30 135.2 87 78.2
Lj6g0014805 Lotus japonicus HOM05D002663 ORTHO05D002988 3.3e-30 135.2 82 81.7
Rhsim02G0037500 Rhododendron simsii HOM05D002663 ORTHO05D002988 3.3e-30 135.2 80 85.0
Gohir.D01G023000 Gossypium hirsutum HOM05D002663 ORTHO05D002988 5.7e-30 134.4 82 80.5
Gorai.002G025400 Gossypium raimondii HOM05D002663 ORTHO05D002988 5.7e-30 134.4 82 80.5
Ciclev10005068m.g Citrus clementina HOM05D002663 ORTHO05D002988 9.6e-30 133.7 82 79.3
Lalb_Chr19g0128191 Lupinus albus HOM05D002663 ORTHO05D002988 9.6e-30 133.7 82 79.3
CiPaw.01G184000 Carya illinoinensis HOM05D002663 ORTHO05D002988 1.3e-29 133.3 82 81.7
FAN17G1274 Fragaria x ananassa HOM05D002663 ORTHO05D002988 1.3e-29 133.3 78 82.1
FAN22G0078 Fragaria x ananassa HOM05D002663 ORTHO05D002988 1.3e-29 133.3 78 82.1
Prupe.1G040000 Prunus persica HOM05D002663 ORTHO05D002988 1.3e-29 133.3 82 80.5
TPR.G25174 Trifolium pratense HOM05D002663 ORTHO05D002988 1.3e-29 133.3 82 80.5
Cc03_g05580 Coffea canephora HOM05D002663 ORTHO05D002988 1.6e-29 132.9 82 78.0
Hma1.2p1_0992F.1_g245210 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 2.1e-29 132.5 82 80.5
arahy.Tifrunner.gnm1.ann1.3DH906 Arachis hypogaea HOM05D002663 ORTHO05D002988 2.8e-29 132.1 82 79.3
arahy.Tifrunner.gnm1.ann1.93JRWW Arachis hypogaea HOM05D002663 ORTHO05D002988 2.8e-29 132.1 82 79.3
FvH4_4g03680 Fragaria vesca HOM05D002663 ORTHO05D002988 2.8e-29 132.1 78 80.8
FAN12G2471 Fragaria x ananassa HOM05D002663 ORTHO05D002988 2.8e-29 132.1 78 80.8
Psat6g104760 Pisum sativum HOM05D002663 ORTHO05D002988 2.8e-29 132.1 78 82.1
HanXRQChr03g0091441 Helianthus annuus HOM05D002663 ORTHO05D002988 3.7e-29 131.7 82 79.3
GSVIVG01027822001 Vitis vinifera HOM05D002663 ORTHO05D002988 3.7e-29 131.7 82 80.5
Gohir.A01G024900 Gossypium hirsutum HOM05D002663 ORTHO05D002988 4.8e-29 131.3 82 79.3
RcHm_v2.0_Chr4g0393301 Rosa chinensis HOM05D002663 ORTHO05D002988 6.2e-29 131.0 78 79.5
MD16G1219600 Malus domestica HOM05D002663 ORTHO05D002988 8.2e-29 130.6 78 80.8
Potri.008G167400 Populus trichocarpa HOM05D002663 ORTHO05D002988 8.2e-29 130.6 79 78.5
TAR362G0984 Trochodendron aralioides HOM05D002663 ORTHO05D002988 1.1e-28 130.2 82 79.3
Aa31LG1G20460 Aethionema arabicum HOM05D002663 ORTHO05D002988 1.4e-28 129.8 79 78.5
Ah.04g155740 Amaranthus hybridus HOM05D002663 ORTHO05D002988 1.4e-28 129.8 80 80.0
Duzib151G0352 Durio zibethinus HOM05D002663 ORTHO05D002988 1.4e-28 129.8 79 82.3
Dinv29857 Davidia involucrata HOM05D002663 ORTHO05D002988 1.8e-28 129.4 82 76.8
Prupe.1G039700 Prunus persica HOM05D002663 ORTHO05D002988 1.8e-28 129.4 78 79.5
CSS0029715 Camellia sinensis var. sinensis HOM05D002663 ORTHO05D002988 2.4e-28 129.0 82 79.3
ECA240G1813 Erigeron canadensis HOM05D001289 ORTHO05D002298 2.4e-28 129.0 81 77.8
PGR004G1088 Punica granatum HOM05D002663 ORTHO05D002988 2.4e-28 129.0 83 78.3
Lsat_1_v5_gn_3_120601 Lactuca sativa HOM05D002663 ORTHO05D002988 3.1e-28 128.6 82 75.6
AL1G14030 Arabidopsis lyrata HOM05D002663 ORTHO05D002988 4.1e-28 128.3 79 78.5
A10p02860 Brassica napus HOM05D002663 ORTHO05D002988 4.1e-28 128.3 79 78.5
Nitab4.5_0000302g0180 Nicotiana tabacum HOM05D002663 ORTHO05D002988 5.3e-28 127.9 80 80.0
Sp1g03240 Schrenkiella parvula HOM05D002663 ORTHO05D002988 5.3e-28 127.9 79 77.2
Solyc06g053600.4 Solanum lycopersicum HOM05D002663 ORTHO05D002988 5.3e-28 127.9 80 80.0
Sopen06g018690 Solanum pennellii HOM05D002663 ORTHO05D002988 5.3e-28 127.9 80 80.0
PGSC0003DMG400016293 Solanum tuberosum HOM05D002663 ORTHO05D002988 5.3e-28 127.9 80 80.0
ECA240G4022 Erigeron canadensis HOM05D002663 ORTHO05D002988 6.9e-28 127.5 82 76.8
Hund03041 Selenicereus undatus HOM05D002663 ORTHO05D002988 6.9e-28 127.5 80 77.5
BcaC07g36908 Brassica carinata HOM05D002663 ORTHO05D002988 9.0e-28 127.1 79 77.2
C05p02610 Brassica napus HOM05D002663 ORTHO05D002988 9.0e-28 127.1 79 77.2
CAN.G374.14 Capsicum annuum HOM05D002663 ORTHO05D002988 9.0e-28 127.1 80 78.8
Carub.0001s0360 Capsella rubella HOM05D002663 ORTHO05D002988 1.5e-27 126.3 79 75.9
Thhalv10007737m.g Eutrema salsugineum HOM05D002663 ORTHO05D002988 1.5e-27 126.3 79 77.2
Nitab4.5_0005627g0010 Nicotiana tabacum HOM05D002663 ORTHO05D002988 1.5e-27 126.3 80 78.8
Peaxi162Scf00579g00048 Petunia axillaris HOM05D002663 ORTHO05D002988 2.0e-27 125.9 80 78.8
RcHm_v2.0_Chr4g0393291 Rosa chinensis HOM05D002663 ORTHO05D002988 2.0e-27 125.9 78 76.9
AUR62002140 Chenopodium quinoa HOM05D002663 ORTHO05D002988 2.6e-27 125.6 80 80.0
AUR62015568 Chenopodium quinoa HOM05D002663 ORTHO05D002988 3.4e-27 125.2 80 80.0
ClCG04G012670 Citrullus lanatus HOM05D002663 ORTHO05D002988 3.4e-27 125.2 79 77.2
Migut.N00273 Erythranthe guttata HOM05D002663 ORTHO05D002988 3.4e-27 125.2 79 75.9
Oeu011504.1 Olea europaea HOM05D002663 ORTHO05D002988 3.4e-27 125.2 79 75.9
Sc13g0005480 Simmondsia chinensis HOM05D002663 ORTHO05D002988 3.4e-27 125.2 80 75.0
AT1G04420 Arabidopsis thaliana HOM05D002663 ORTHO05D002988 4.5e-27 124.8 79 77.2
MELO3C001939.2 Cucumis melo HOM05D002663 ORTHO05D002988 4.5e-27 124.8 79 75.9
TWI09G0632 Tripterygium wilfordii HOM05D002663 ORTHO05D002988 4.5e-27 124.8 82 76.8
THA.LOC104801083 Tarenaya hassleriana HOM05D002663 ORTHO05D002988 5.8e-27 124.4 79 77.2
CARHR003760 Cardamine hirsuta HOM05D002663 ORTHO05D002988 1.0e-26 123.6 79 74.7
Cpa.g.sc44.50 Carica papaya HOM05D002663 ORTHO05D002988 1.0e-26 123.6 78 78.2
SGA_v2.0_scaffold31G12664 Striga asiatica HOM05D002663 ORTHO05D002988 1.3e-26 123.2 79 74.7
EL10Ac3g05002 Beta vulgaris HOM05D002663 ORTHO05D002988 1.7e-26 122.9 80 77.5
CANSAT78G1183 Cannabis sativa HOM05D002663 ORTHO05D002988 2.2e-26 122.5 78 74.4
CsaV3_1G005010 Cucumis sativus L. HOM05D002663 ORTHO05D002988 2.2e-26 122.5 79 73.4
MSTRG.21915 Avicennia marina HOM05D002663 ORTHO05D002988 3.8e-26 121.7 79 75.9
AUR62002141 Chenopodium quinoa HOM05D002663 ORTHO05D002988 6.5e-26 120.9 79 77.2
AUR62015567 Chenopodium quinoa HOM05D002663 ORTHO05D002988 6.5e-26 120.9 79 77.2
unitig_26.g9552 Utricularia gibba HOM05D002663 ORTHO05D002988 8.4e-26 120.6 79 77.2
PSO063G6804 Papaver somniferum HOM05D002663 ORTHO05D002988 1.9e-25 119.4 78 76.9
Zm00001eb051500 Zea mays HOM05D002663 ORTHO05D002988 2.5e-25 119.0 82 70.7
MBI07_g16927_MAGBIO Magnolia biondii HOM05D002663 ORTHO05D002988 4.2e-25 118.2 82 73.2
PSO017G0007 Papaver somniferum HOM05D002663 ORTHO05D002988 4.2e-25 118.2 78 75.6
BraA10t42553Z Brassica rapa HOM05D002663 ORTHO05D002988 5.5e-25 117.9 74 78.4
HPP92_008955 Vanilla planifolia HOM05D002663 ORTHO05D002988 7.2e-25 117.5 79 75.9
BolC5t29042H Brassica oleracea HOM05D002663 ORTHO05D002988 1.2e-24 116.7 74 77.0
Sed0019138 Sechium edule HOM05D002663 ORTHO05D002988 2.1e-24 115.9 79 70.9
Os03g0611200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 1.3e-23 113.2 78 69.2
Actinidia39905 Actinidia chinensis HOM05D002663 ORTHO05D002988 1.1e-22 110.2 70 78.6
ATR0736G162 Amborella trichopoda HOM05D002663 ORTHO05D002988 1.1e-22 110.2 82 69.5
SMO134G0117 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 1.6e-21 106.3 77 70.1
Pp3c12_10890 Physcomitrium patens HOM05D002663 ORTHO05D002988 2.2e-21 105.9 79 69.6
Sabra08G0127600 Salix brachista HOM05D000189 ORTHO05D000474 2.8e-21 105.5 65 78.5
SEGI_11814 Sequoiadendron giganteum HOM05D002663 ORTHO05D002988 3.7e-21 105.1 79 69.6
Mapoly0053s0107 Marchantia polymorpha HOM05D002663 ORTHO05D002988 2.3e-15 85.9 78 53.8
PRCOL_00006218 Prasinoderma coloniale HOM05D002663 ORTHO05D002988 3.3e-14 82.0 80 51.2
Cre10.g461900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 2.4e-12 75.9 77 49.4
Cfa006059 Carpinus fangiana HOM05D002663 ORTHO05D002988 2.5e-09 65.9 77 42.9
Haze_04793 Corylus avellana HOM05D002663 ORTHO05D002988 9.4e-09 63.9 77 41.6
Pp3c21_17600 Physcomitrium patens HOM05D002663 ORTHO05D002988 2.7e-08 62.4 71 45.1
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 2.7e-08 62.4 77 41.6
EL10Ac8g19575 Beta vulgaris HOM05D002663 ORTHO05D002988 4.7e-08 61.6 78 39.7
Manes.05G070100 Manihot esculenta HOM05D002663 ORTHO05D002988 6.1e-08 61.2 77 42.9
DCAR_018373 Daucus carota HOM05D002663 ORTHO05D002988 7.9e-08 60.8 77 42.9
Atru.chr5.1301_Atru.chr5.1302 Acer truncatum HOM05D002663 ORTHO05D002988 1.0e-07 60.5 77 44.2
RcHm_v2.0_Chr6g0292291 Rosa chinensis HOM05D002663 ORTHO05D002988 1.0e-07 60.5 77 41.6
CBR_g12488 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-07 60.1 50 58.0
PRCOL_00006155 Prasinoderma coloniale HOM05D002663 ORTHO05D002988 1.4e-07 60.1 79 41.8
CiPaw.07G098000 Carya illinoinensis HOM05D002663 ORTHO05D002988 1.8e-07 59.7 77 41.6
Mapoly0131s0005 Marchantia polymorpha HOM05D002663 ORTHO05D002988 1.8e-07 59.7 71 42.3
MCO11G017 Micromonas commoda HOM05D002663 ORTHO05D002988 1.8e-07 59.7 78 42.3
PRCOL_00002337 Prasinoderma coloniale HOM05D002663 ORTHO05D049067 1.8e-07 59.7 76 39.5
Lsat_1_v5_gn_5_189660 Lactuca sativa HOM05D002663 ORTHO05D002988 2.3e-07 59.3 78 39.7
Glyma.05G165200 Glycine max HOM05D002663 ORTHO05D002988 3.0e-07 58.9 77 42.9
Ah.08g212770 Amaranthus hybridus HOM05D002663 ORTHO05D002988 5.1e-07 58.2 78 38.5
EL10Ac5g11662 Beta vulgaris HOM05D002663 ORTHO05D002988 5.1e-07 58.2 78 37.2
HPP92_011329 Vanilla planifolia HOM05D002663 ORTHO05D002988 5.1e-07 58.2 79 41.8
Cpa.g.sc9.146 Carica papaya HOM05D002663 ORTHO05D002988 6.7e-07 57.8 77 41.6
ECA248G0286 Erigeron canadensis HOM05D002663 ORTHO05D002988 6.7e-07 57.8 79 38.0
HanXRQChr11g0334821 Helianthus annuus HOM05D002663 ORTHO05D002988 6.7e-07 57.8 79 38.0
CBR_g34010 Chara braunii HOM05D002663 ORTHO05D002988 8.8e-07 57.4 77 37.7
CBR_g410 Chara braunii HOM05D002663 ORTHO05D002988 8.8e-07 57.4 77 37.7
Rhsim13G0018700 Rhododendron simsii HOM05D002663 ORTHO05D002988 8.8e-07 57.4 77 41.6
TWI14G0131 Tripterygium wilfordii HOM05D002663 ORTHO05D002988 8.8e-07 57.4 77 39.0
Actinidia00709 Actinidia chinensis HOM05D002663 ORTHO05D002988 1.1e-06 57.0 70 42.9
Cre17.g699900 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 1.1e-06 57.0 78 41.0
FvH4_2g24450 Fragaria vesca HOM05D002663 ORTHO05D002988 1.1e-06 57.0 77 37.7
FAN24G0935 Fragaria x ananassa HOM05D002663 ORTHO05D002988 1.1e-06 57.0 77 37.7
Os11g0645200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 1.1e-06 57.0 77 39.0
Glyma.08G122600 Glycine max HOM05D002663 ORTHO05D002988 1.5e-06 56.6 77 41.6
Lj1A40T82 Lonicera japonica HOM05D002663 ORTHO05D002988 1.5e-06 56.6 77 39.0
AUR62034595 Chenopodium quinoa HOM05D002663 ORTHO05D002988 2.0e-06 56.2 78 39.7
AUR62036674 Chenopodium quinoa HOM05D002663 ORTHO05D002988 2.0e-06 56.2 75 41.3
AUR62044300 Chenopodium quinoa HOM05D002663 ORTHO05D002988 2.0e-06 56.2 75 41.3
vmacro02520 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 2.0e-06 56.2 77 40.3
SMO236G0130 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 2.6e-06 55.8 82 36.6
Gohir.A11G118800 Gossypium hirsutum HOM05D002663 ORTHO05D002988 3.3e-06 55.5 77 40.3
Hma1.2p1_1651F.1_g295770 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 3.3e-06 55.5 77 40.3
COL.COLO4_08048 Corchorus olitorius HOM05D002663 ORTHO05D002988 4.4e-06 55.1 77 37.7
Gohir.D11G123700 Gossypium hirsutum HOM05D002663 ORTHO05D002988 4.4e-06 55.1 77 39.0
Medtr8g088170 Medicago truncatula HOM05D000825 ORTHO05D003684 4.4e-06 55.1 83 37.3
Potri.015G042100 Populus trichocarpa HOM05D002663 ORTHO05D002988 4.4e-06 55.1 77 41.6
PRCOL_00006219 Prasinoderma coloniale HOM05D002663 ORTHO05D049110 4.4e-06 55.1 84 38.1
unitig_744.g24628 Utricularia gibba HOM05D002663 ORTHO05D002988 4.4e-06 55.1 76 38.2
CDE05G2057 Ceratophyllum demersum HOM05D002663 ORTHO05D002988 5.7e-06 54.7 75 40.0
Dinv11283 Davidia involucrata HOM05D002663 ORTHO05D002988 5.7e-06 54.7 73 42.5
Gorai.007G132600 Gossypium raimondii HOM05D002663 ORTHO05D002988 5.7e-06 54.7 77 39.0
Ca_17862_v3 Cicer arietinum L. HOM05D002663 ORTHO05D002988 7.4e-06 54.3 75 44.0
Migut.N02124 Erythranthe guttata HOM05D002663 ORTHO05D002988 7.4e-06 54.3 77 37.7


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