Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C62G7 Lonicera japonica HOM05D000051 ORTHO05D014235 6.5e-87 323.9 154 100.0
Lj3C54T1 Lonicera japonica HOM05D000051 ORTHO05D014235 1.2e-61 240.0 133 87.2
Lj3C73G19 Lonicera japonica HOM05D000051 ORTHO05D014235 5.0e-47 191.4 134 70.9
Lj3A51T16 Lonicera japonica HOM05D000051 ORTHO05D014235 4.9e-42 174.9 132 64.4
Lj3A56G17 Lonicera japonica HOM05D000051 ORTHO05D014235 1.9e-41 172.9 132 63.6
Lj3A67T9 Lonicera japonica HOM05D000051 ORTHO05D000015 4.3e-38 161.8 137 59.1
Lj3A63G29 Lonicera japonica HOM05D000051 ORTHO05D014235 1.2e-37 160.2 92 85.9
Lj4A467T12 Lonicera japonica HOM05D000051 ORTHO05D000015 1.6e-37 159.8 134 60.4
Lj3A64T9 Lonicera japonica HOM05D000051 ORTHO05D014235 3.2e-33 145.6 144 53.5
Rhsim06G0214100 Rhododendron simsii HOM05D000051 ORTHO05D000015 5.3e-20 101.7 156 41.0
Rhsim07G0064000 Rhododendron simsii HOM05D000689 ORTHO05D014235 1.3e-15 87.0 137 38.0
Rhsim07G0063700 Rhododendron simsii HOM05D000051 ORTHO05D000015 3.3e-14 82.4 133 39.1
Actinidia09921 Actinidia chinensis HOM05D000051 ORTHO05D000015 1.6e-13 80.1 122 41.0
Lj1A868T36 Lonicera japonica HOM05D000051 ORTHO05D000015 1.6e-13 80.1 135 37.8
Actinidia06264 Actinidia chinensis HOM05D000051 ORTHO05D000015 1.1e-12 77.4 126 39.7
Lj3C52T1 Lonicera japonica HOM05D000051 ORTHO05D014235 4.9e-10 68.6 40 67.5
Actinidia15955 Actinidia chinensis HOM05D000051 ORTHO05D000015 9.3e-09 64.3 133 33.8
AT1G06630 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 9.3e-09 64.3 123 35.0
CSS0040403 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 6.0e-08 61.6 98 41.8
GSVIVG01038063001 Vitis vinifera HOM05D000051 ORTHO05D000015 1.0e-07 60.8 131 33.6
Carub.0005s2678 Capsella rubella HOM05D000689 ORTHO05D000015 2.3e-07 59.7 124 33.1
Sc13g0005680 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.3e-07 59.7 134 32.1
Hund23290 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.0e-07 59.3 125 37.6
AL1G66510 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.1e-07 58.5 139 29.5
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 5.1e-07 58.5 109 33.9
AT1G21990 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 8.7e-07 57.8 135 33.3
A03p19160 Brassica napus HOM05D000689 ORTHO05D000015 8.7e-07 57.8 134 32.1
CSS0042786 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.1e-06 57.4 129 33.3
Carub.0005s1509 Capsella rubella HOM05D000689 ORTHO05D000015 1.1e-06 57.4 121 36.4
BcaC09g50088 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-06 57.0 124 32.3
C01p29230 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-06 57.0 124 32.3
BolC1t02852H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-06 57.0 124 32.3
CSS0019936 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.5e-06 56.2 126 33.3
DCAR_017364 Daucus carota HOM05D000051 ORTHO05D000015 2.5e-06 56.2 126 29.4
Thhalv10009536m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.5e-06 56.2 134 29.9
AT1G56610 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.3e-06 55.5 135 28.9
Cc05_g13420 Coffea canephora HOM05D000051 ORTHO05D000015 4.3e-06 55.5 131 30.5


User provided reference genes

Program Settings