Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C62G5 Lonicera japonica HOM05D000051 ORTHO05D014235 3.0e-51 204.9 104 100.0
Lj3A63G29 Lonicera japonica HOM05D000051 ORTHO05D014235 4.2e-45 184.5 101 92.1
Lj3C54T1 Lonicera japonica HOM05D000051 ORTHO05D014235 4.2e-45 184.5 101 92.1
Lj3A51T16 Lonicera japonica HOM05D000051 ORTHO05D014235 9.3e-37 156.8 101 78.2
Lj3A67T9 Lonicera japonica HOM05D000051 ORTHO05D000015 1.5e-34 149.4 99 74.7
Lj3A56G17 Lonicera japonica HOM05D000051 ORTHO05D014235 2.1e-33 145.6 97 76.3
Lj3C73G19 Lonicera japonica HOM05D000051 ORTHO05D014235 4.3e-18 94.7 64 73.4
Lj4A467T12 Lonicera japonica HOM05D000051 ORTHO05D000015 1.7e-14 82.8 56 71.4
Lj3A64T9 Lonicera japonica HOM05D000051 ORTHO05D014235 2.2e-14 82.4 70 65.7
Lj3A58T11 Lonicera japonica HOM05D000051 ORTHO05D014235 3.8e-14 81.6 51 78.4
Lj3A52T14 Lonicera japonica HOM05D000051 ORTHO05D014235 1.8e-11 72.8 41 85.4
CSS0019936 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.1e-10 70.1 76 46.1
Lj3C31T9 Lonicera japonica HOM05D000051 ORTHO05D014235 5.7e-10 67.8 38 86.8
Lj1A868T33 Lonicera japonica HOM05D000051 ORTHO05D000015 6.3e-09 64.3 83 41.0
QL05p062747 Quercus lobata HOM05D000051 ORTHO05D000015 8.2e-09 63.9 77 45.5
Actinidia06264 Actinidia chinensis HOM05D000051 ORTHO05D000015 1.1e-08 63.5 87 34.5
Lj3A32G33 Lonicera japonica HOM05D000051 ORTHO05D014235 1.4e-08 63.2 41 78.0
Lj1A868G40 Lonicera japonica HOM05D000051 ORTHO05D000015 1.8e-08 62.8 80 42.5
Oeu013813.1 Olea europaea HOM05D000051 ORTHO05D000015 3.1e-08 62.0 87 37.9
Actinidia09921 Actinidia chinensis HOM05D000051 ORTHO05D000015 5.3e-08 61.2 89 40.4
QL02p013530 Quercus lobata HOM05D000051 ORTHO05D000015 6.9e-08 60.8 72 48.6
QL02p004219 Quercus lobata HOM05D000051 ORTHO05D000015 9.1e-08 60.5 81 42.0
Cc05_g13420 Coffea canephora HOM05D000051 ORTHO05D000015 1.2e-07 60.1 73 43.8
FvH4_1g06320 Fragaria vesca HOM05D000051 ORTHO05D000015 1.2e-07 60.1 71 40.8
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 1.5e-07 59.7 65 46.2
Gohir.A13G139900 Gossypium hirsutum HOM05D000051 ORTHO05D000015 1.5e-07 59.7 85 34.1
Rhsim06G0215100 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.5e-07 59.7 90 41.1
Gorai.013G162400 Gossypium raimondii HOM05D000051 ORTHO05D000015 2.0e-07 59.3 85 32.9
Medtr8g014260 Medicago truncatula HOM05D000051 ORTHO05D000015 4.5e-07 58.2 73 39.7
QL02p085131 Quercus lobata HOM05D000051 ORTHO05D000015 4.5e-07 58.2 73 42.5
RcHm_v2.0_Chr5g0028471 Rosa chinensis HOM05D000051 ORTHO05D000015 4.5e-07 58.2 71 40.8
Aqoxy1G03331 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.9e-07 57.8 84 38.1
CSS0016803 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 5.9e-07 57.8 70 41.4
QL05p025606 Quercus lobata HOM05D000051 ORTHO05D000015 5.9e-07 57.8 75 41.3
Migut.M00835 Erythranthe guttata HOM05D000051 ORTHO05D000015 7.7e-07 57.4 75 37.3
QL02p014278 Quercus lobata HOM05D000051 ORTHO05D000015 1.0e-06 57.0 77 41.6
Prupe.4G161300 Prunus persica HOM05D000051 ORTHO05D000015 1.3e-06 56.6 81 42.0
Prupe.4G183700 Prunus persica HOM05D000051 ORTHO05D000015 1.3e-06 56.6 70 41.4
QL08p012268 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-06 56.6 74 43.2
QL08p012292 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-06 56.6 74 43.2
Migut.M00840 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.7e-06 56.2 76 35.5
QL02p085053 Quercus lobata HOM05D000051 ORTHO05D000015 1.7e-06 56.2 83 42.2
Dinv17489 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-06 55.8 70 44.3
Dinv17490 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-06 55.8 70 44.3
Migut.L00791 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.2e-06 55.8 90 34.4
Migut.M00541 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.2e-06 55.8 90 34.4
PSO210G5352 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-06 55.8 91 37.4
PSO017G2530 Papaver somniferum HOM05D000051 ORTHO05D000015 3.8e-06 55.1 79 34.2
RcHm_v2.0_Chr5g0033891 Rosa chinensis HOM05D000051 ORTHO05D000015 3.8e-06 55.1 93 33.3
Duzib187G0942 Durio zibethinus HOM05D000051 ORTHO05D000015 5.0e-06 54.7 73 35.6
Lalb_Chr17g0335911 Lupinus albus HOM05D000051 ORTHO05D000015 5.0e-06 54.7 73 42.5
Prupe.4G161200 Prunus persica HOM05D000051 ORTHO05D000015 5.0e-06 54.7 99 33.3
SGA_v2.0_scaffold73G24284 Striga asiatica HOM05D000051 ORTHO05D000015 5.0e-06 54.7 77 39.0
Ciclev10018327m.g Citrus clementina HOM05D000051 ORTHO05D000015 6.5e-06 54.3 74 39.2
Dinv20164 Davidia involucrata HOM05D000051 ORTHO05D000015 6.5e-06 54.3 73 38.4
Glyma.18G164400 Glycine max HOM05D000051 ORTHO05D000015 6.5e-06 54.3 86 34.9
PSO210G0477 Papaver somniferum HOM05D000051 ORTHO05D000015 6.5e-06 54.3 71 42.3
vmacro11746 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 6.5e-06 54.3 73 41.1
Ah.08g209330 Amaranthus hybridus HOM05D000051 ORTHO05D000015 8.5e-06 53.9 80 35.0
AT5G56325 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.5e-06 53.9 74 36.5
Rhsim06G0214100 Rhododendron simsii HOM05D000051 ORTHO05D000015 8.5e-06 53.9 85 37.6
RcHm_v2.0_Chr2g0115721 Rosa chinensis HOM05D000051 ORTHO05D000015 8.5e-06 53.9 80 35.0


User provided reference genes

Program Settings