Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C625T2 Lonicera japonica HOM05D008183 ORTHO05D007254 2.6e-86 322.0 162 100.0
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 8.0e-11 71.2 110 39.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.3e-10 69.7 152 30.3
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 6.8e-10 68.2 110 38.2
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 1.2e-09 67.4 89 40.4
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.2e-09 67.4 82 39.0
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.2e-09 67.4 92 37.0
COL.COLO4_22912 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.6e-09 66.2 124 32.3
Lj1g0015022 Lotus japonicus HOM05D000003 ORTHO05D000167 4.4e-09 65.5 88 38.6
Lj1g0000509 Lotus japonicus HOM05D000003 ORTHO05D000004 5.7e-09 65.1 105 33.3
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.5e-09 64.7 84 40.5
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 9.8e-09 64.3 94 30.9
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-08 63.9 86 37.2
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.7e-08 63.5 79 40.5
FvH4_1g29601 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-08 63.5 129 33.3
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 1.7e-08 63.5 79 40.5
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-08 63.2 84 40.5
Lj1g0005916 Lotus japonicus HOM05D003167 ORTHO05D003929 2.2e-08 63.2 106 33.0
Lj3g0003452 Lotus japonicus HOM05D000003 ORTHO05D000004 2.2e-08 63.2 108 32.4
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-08 62.4 80 37.5
COL.COLO4_30555 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.7e-08 62.4 91 35.2
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.9e-08 62.0 84 38.1
CANSAT01G1633 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-08 62.0 144 29.2
Rhsim01G0194100 Rhododendron simsii HOM05D018264 ORTHO05D018096 4.9e-08 62.0 143 30.1
CANSAT25G0112 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-08 61.6 132 28.8
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 6.3e-08 61.6 121 32.2
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 8.3e-08 61.2 82 40.2
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 8.3e-08 61.2 92 35.9
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.1e-07 60.8 88 35.2
Lj1g0002506 Lotus japonicus HOM05D000003 ORTHO05D007254 1.4e-07 60.5 146 27.4
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.4e-07 58.5 78 38.5
Gorai.004G068400 Gossypium raimondii HOM05D008183 ORTHO05D007254 5.4e-07 58.5 128 28.1
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.0e-07 58.2 84 35.7
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.0e-07 58.2 90 37.8
Duzib213G0982 Durio zibethinus HOM05D008133 ORTHO05D007254 7.0e-07 58.2 80 36.2
Sc07g0002650 Simmondsia chinensis HOM05D015356 ORTHO05D007254 1.2e-06 57.4 133 31.6
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 1.6e-06 57.0 137 29.2
RcHm_v2.0_Chr3g0476031 Rosa chinensis HOM05D011824 ORTHO05D006737 2.0e-06 56.6 74 39.2
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 56.2 141 26.2
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.7e-06 56.2 101 31.7
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.7e-06 56.2 91 34.1
FAN04G0275 Fragaria x ananassa HOM05D011824 ORTHO05D017030 2.7e-06 56.2 91 38.5
TAR460G0005 Trochodendron aralioides HOM05D040956 ORTHO05D000167 2.7e-06 56.2 70 38.6
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.5e-06 55.8 83 41.0
Lj2g0023892 Lotus japonicus HOM05D000003 ORTHO05D007254 3.5e-06 55.8 89 33.7
PSO017G5116 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 100 36.0
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.5e-06 55.8 92 37.0
COL.COLO4_17181 Corchorus olitorius HOM05D008183 ORTHO05D007254 4.5e-06 55.5 82 36.6
COL.COLO4_09268 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.9e-06 55.1 127 26.8
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.7e-06 54.7 84 34.5
Sc13g0005140 Simmondsia chinensis HOM05D000244 ORTHO05D000179 7.7e-06 54.7 71 40.8
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 7.7e-06 54.7 141 28.4


User provided reference genes

Program Settings