Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C583T4 Lonicera japonica HOM05D005405 ORTHO05D006333 7.0e-218 760.4 395 100.0
Dinv38269 Davidia involucrata HOM05D005405 ORTHO05D006333 4.7e-57 226.1 514 35.4
CSS0036421 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 4.2e-45 186.4 495 34.3
CSS0015206 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 2.3e-43 180.6 495 33.5
CSS0043604 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 2.2e-38 164.1 506 32.2
Lj6A613T36 Lonicera japonica HOM05D005405 ORTHO05D006333 2.2e-38 164.1 339 39.2
Actinidia11394 Actinidia chinensis HOM05D005405 ORTHO05D006333 1.4e-32 144.8 430 30.7
Oeu022333.1 Olea europaea HOM05D005405 ORTHO05D006333 2.4e-32 144.1 377 32.9
vmacro15506 Vaccinium macrocarpon HOM05D005405 ORTHO05D006333 1.1e-29 135.2 364 34.6
HanXRQChr14g0435041 Helianthus annuus HOM05D005405 ORTHO05D006333 9.3e-29 132.1 358 34.9
MSTRG.21949 Avicennia marina HOM05D005405 ORTHO05D006333 1.6e-28 131.3 440 30.7
Rhsim02G0053500 Rhododendron simsii HOM05D005405 ORTHO05D006333 3.5e-28 130.2 374 34.5
Manes.15G050712 Manihot esculenta HOM05D005405 ORTHO05D006333 1.0e-27 128.6 344 32.0
Nitab4.5_0002920g0020 Nicotiana tabacum HOM05D005405 ORTHO05D006333 1.8e-24 117.9 473 30.9
Peaxi162Scf00047g01223 Petunia axillaris HOM05D005405 ORTHO05D006333 2.6e-23 114.0 475 30.7
TAR362G0670 Trochodendron aralioides HOM05D005405 ORTHO05D006333 3.4e-23 113.6 371 31.3
Sopen09g034410 Solanum pennellii HOM05D005405 ORTHO05D006333 2.2e-22 110.9 368 31.0
CiPaw.02G068100 Carya illinoinensis HOM05D005405 ORTHO05D006333 2.9e-22 110.5 355 31.8
QL06p023456 Quercus lobata HOM05D005405 ORTHO05D006333 4.9e-22 109.8 402 29.4
Cc03_g07300 Coffea canephora HOM05D005405 ORTHO05D006333 6.5e-22 109.4 466 29.4
Rhsim02G0140000 Rhododendron simsii HOM05D005405 ORTHO05D006333 1.4e-21 108.2 339 32.2
DCAR_030784 Daucus carota HOM05D005405 ORTHO05D006333 1.9e-21 107.8 483 26.1
Nn1g03142 Nelumbo nucifera HOM05D005405 ORTHO05D006333 2.5e-21 107.5 395 29.1
Nn3g19905 Nelumbo nucifera HOM05D005405 ORTHO05D006333 3.2e-21 107.1 384 29.9
Lalb_Chr19g0128851 Lupinus albus HOM05D005405 ORTHO05D006333 4.2e-21 106.7 316 33.9
Haze_11572 Corylus avellana HOM05D005405 ORTHO05D006333 7.1e-21 105.9 360 30.8
Nitab4.5_0003904g0030 Nicotiana tabacum HOM05D005405 ORTHO05D006333 7.1e-21 105.9 482 28.8
TAR365G1216 Trochodendron aralioides HOM05D005405 ORTHO05D006333 7.1e-21 105.9 372 31.2
Cfa014900 Carpinus fangiana HOM05D005405 ORTHO05D006333 9.3e-21 105.5 447 28.0
Sabra03G0129300 Salix brachista HOM05D005405 ORTHO05D006333 1.3e-19 101.7 357 30.3
RcHm_v2.0_Chr4g0385131 Rosa chinensis HOM05D005405 ORTHO05D006333 1.8e-19 101.3 381 31.2
Lalb_Chr03g0036631 Lupinus albus HOM05D005405 ORTHO05D006333 2.3e-19 100.9 391 27.9
Potri.003G176500 Populus trichocarpa HOM05D005405 ORTHO05D006333 3.9e-19 100.1 327 32.1
Solyc09g091480.4 Solanum lycopersicum HOM05D005405 ORTHO05D006333 1.5e-18 98.2 470 27.7
CsaV3_3G011210 Cucumis sativus L. HOM05D005405 ORTHO05D006333 2.5e-18 97.4 344 31.1
MELO3C006332.2 Cucumis melo HOM05D005405 ORTHO05D006333 9.7e-18 95.5 344 31.1
vmacro23320 Vaccinium macrocarpon HOM05D005405 ORTHO05D006333 9.7e-18 95.5 455 27.3
Prupe.1G003200 Prunus persica HOM05D005405 ORTHO05D006333 2.2e-17 94.4 426 27.5
TPR.G11288 Trifolium pratense HOM05D005405 ORTHO05D006333 2.8e-17 94.0 301 31.6
ClCG05G003540 Citrullus lanatus HOM05D005405 ORTHO05D006333 3.7e-17 93.6 368 28.5
Migut.N00342 Erythranthe guttata HOM05D005405 ORTHO05D006333 3.7e-17 93.6 356 28.4
PGR142G3403 Punica granatum HOM05D005405 ORTHO05D006333 8.2e-17 92.4 347 31.1
Lsat_1_v5_gn_1_72381 Lactuca sativa HOM05D005405 ORTHO05D006333 1.4e-16 91.7 352 30.7
ECA238G1203 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-16 91.3 350 30.3
RhsimUnG0135700 Rhododendron simsii HOM05D005405 ORTHO05D006333 1.8e-16 91.3 319 31.7
RhsimUnG0181000 Rhododendron simsii HOM05D005405 ORTHO05D006333 1.8e-16 91.3 319 31.7
Duzib268G1063 Durio zibethinus HOM05D005405 ORTHO05D006333 2.4e-16 90.9 347 28.8
MD04G1003700 Malus domestica HOM05D005405 ORTHO05D006333 2.4e-16 90.9 408 28.7
Ca_11844_v3 Cicer arietinum L. HOM05D005405 ORTHO05D006333 3.1e-16 90.5 325 29.5
Duzib268G1747 Durio zibethinus HOM05D005405 ORTHO05D006333 3.1e-16 90.5 347 28.5
PGSC0003DMG400029647 Solanum tuberosum HOM05D005405 ORTHO05D006333 1.2e-15 88.6 468 26.9
THA.LOC104816022 Tarenaya hassleriana HOM05D005405 ORTHO05D006333 1.5e-15 88.2 285 31.6
CSS0040970 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 5.9e-15 86.3 181 37.6
Medtr1g047180 Medicago truncatula HOM05D005405 ORTHO05D006333 2.2e-14 84.3 331 28.4
Atru.chr4.1776 Acer truncatum HOM05D005405 ORTHO05D006333 3.8e-14 83.6 399 28.3
Duzib151G0041 Durio zibethinus HOM05D005405 ORTHO05D006333 3.8e-14 83.6 368 29.6
Lj6g0005257 Lotus japonicus HOM05D001191 ORTHO05D006333 8.5e-14 82.4 407 27.0
Eucgr.H00089 Eucalyptus grandis HOM05D005405 ORTHO05D006333 1.1e-13 82.0 372 28.2
Ciclev10004706m.g Citrus clementina HOM05D005405 ORTHO05D006333 2.5e-13 80.9 332 27.7
Sed0004689 Sechium edule HOM05D005405 ORTHO05D006333 3.2e-13 80.5 428 25.0
Hund05655 Selenicereus undatus HOM05D005405 ORTHO05D006333 4.2e-13 80.1 260 31.9
FvH4_4g00300 Fragaria vesca HOM05D005405 ORTHO05D006333 5.5e-13 79.7 339 29.2
EL10Ac7g18092 Beta vulgaris HOM05D005405 ORTHO05D006333 9.4e-13 79.0 290 31.0
COL.COLO4_20311 Corchorus olitorius HOM05D005405 ORTHO05D006333 1.2e-12 78.6 452 25.7
Gohir.D09G196500 Gossypium hirsutum HOM05D005405 ORTHO05D006333 4.6e-12 76.6 365 27.7
Sabra01G0036300 Salix brachista HOM05D005405 ORTHO05D006333 7.9e-12 75.9 343 29.7
Sed0022326 Sechium edule HOM05D005405 ORTHO05D006333 7.9e-12 75.9 320 29.7
Thecc.04G210400 Theobroma cacao HOM05D005405 ORTHO05D006333 7.9e-12 75.9 355 27.9
FAN12G1620 Fragaria x ananassa HOM05D005405 ORTHO05D006333 1.0e-11 75.5 361 28.0
Gohir.A09G202500 Gossypium hirsutum HOM05D005405 ORTHO05D006333 1.0e-11 75.5 364 30.5
Psat6g048040 Pisum sativum HOM05D005405 ORTHO05D006333 1.0e-11 75.5 390 27.7
Sp1g03630 Schrenkiella parvula HOM05D005405 ORTHO05D006333 1.0e-11 75.5 310 27.1
Glyma.10G124600 Glycine max HOM05D005405 ORTHO05D006333 2.3e-11 74.3 363 26.4
CARHR004180 Cardamine hirsuta HOM05D005405 ORTHO05D006333 5.1e-11 73.2 277 28.9
FAN17G2022 Fragaria x ananassa HOM05D005405 ORTHO05D006333 6.7e-11 72.8 441 26.5
THA.LOC104801040 Tarenaya hassleriana HOM05D005405 ORTHO05D006333 6.7e-11 72.8 359 27.9
Carub.0001s0404 Capsella rubella HOM05D005405 ORTHO05D006333 2.0e-10 71.2 424 26.2
Glyma.20G076700 Glycine max HOM05D005405 ORTHO05D006333 2.0e-10 71.2 442 25.3
Aqoxy7G02749 Aquilegia oxysepala HOM05D005405 ORTHO05D006333 2.5e-10 70.9 347 28.0
Gohir.A02G024600 Gossypium hirsutum HOM05D005405 ORTHO05D006333 2.5e-10 70.9 335 26.0
SGA_v2.0_scaffold2G00820 Striga asiatica HOM05D005405 ORTHO05D006333 3.3e-10 70.5 198 29.8
Gohir.D02G031900 Gossypium hirsutum HOM05D005405 ORTHO05D006333 4.3e-10 70.1 334 27.5
MBI10_g03399_MAGBIO Magnolia biondii HOM05D005405 ORTHO05D006333 7.4e-10 69.3 451 25.3
AT1G04790 Arabidopsis thaliana HOM05D005405 ORTHO05D006333 9.7e-10 68.9 269 28.6
Gorai.005G035400 Gossypium raimondii HOM05D005405 ORTHO05D006333 1.7e-09 68.2 339 26.8
FAN17G2416 Fragaria x ananassa HOM05D005405 ORTHO05D006333 2.8e-09 67.4 463 26.1
Gorai.006G220000 Gossypium raimondii HOM05D005405 ORTHO05D006333 2.8e-09 67.4 363 27.0
GSVIVG01029064001 Vitis vinifera HOM05D005405 ORTHO05D006333 6.3e-09 66.2 64 59.4
ECA248G0186 Erigeron canadensis HOM05D005405 ORTHO05D006333 8.2e-09 65.9 342 27.2
Hund18545 Selenicereus undatus HOM05D005405 ORTHO05D006333 1.8e-08 64.7 373 26.0
CANSAT78G2177 Cannabis sativa HOM05D005405 ORTHO05D006333 5.3e-08 63.2 74 45.9
Phvul.007G236500 Phaseolus vulgaris HOM05D005405 ORTHO05D006333 6.9e-08 62.8 353 27.2
Ah.08g218040 Amaranthus hybridus HOM05D005405 ORTHO05D006333 1.2e-07 62.0 262 30.9
GSVIVG01029065001 Vitis vinifera HOM05D005405 ORTHO05D006333 2.0e-07 61.2 241 29.9
AL1G14510 Arabidopsis lyrata HOM05D005405 ORTHO05D006333 3.4e-07 60.5 420 24.8
AUR62025677 Chenopodium quinoa HOM05D005405 ORTHO05D006333 3.4e-07 60.5 390 25.4
Cpa.g.sc59.100 Carica papaya HOM05D005405 ORTHO05D006333 4.5e-07 60.1 130 34.6
AUR62001292 Chenopodium quinoa HOM05D005405 ORTHO05D006333 5.9e-07 59.7 321 27.7
Sc13g0000010 Simmondsia chinensis HOM05D005405 ORTHO05D006333 1.0e-06 58.9 323 25.1
Thhalv10007101m.g Eutrema salsugineum HOM05D005405 ORTHO05D006333 1.7e-06 58.2 310 25.8
VMungo0720G2049 Vigna mungo HOM05D005405 ORTHO05D006333 5.0e-06 56.6 473 24.9
Cpa.g.sc59.99 Carica papaya HOM05D005405 ORTHO05D006333 8.5e-06 55.8 148 35.8


User provided reference genes

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