Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C557T17 Lonicera japonica HOM05D004618 ORTHO05D005318 7.4e-152 540.4 257 100.0
Lj3A569T42 Lonicera japonica HOM05D004618 ORTHO05D005318 1.9e-67 260.0 200 70.0
Dinv38259 Davidia involucrata HOM05D004618 ORTHO05D005318 8.4e-55 218.0 116 86.2
DCAR_024331 Daucus carota HOM05D004618 ORTHO05D005318 1.3e-52 210.7 121 78.5
vmacro00499 Vaccinium macrocarpon HOM05D004618 ORTHO05D005318 1.8e-52 210.3 121 77.7
Lsat_1_v5_gn_1_72241 Lactuca sativa HOM05D004618 ORTHO05D005318 5.1e-52 208.8 121 76.9
Hma1.2p1_3134F.1_g332990 Hydrangea macrophylla HOM05D004618 ORTHO05D005318 8.7e-52 208.0 121 76.0
Actinidia34629 Actinidia chinensis HOM05D004618 ORTHO05D005318 9.6e-51 204.5 121 76.0
GSVIVG01001871001 Vitis vinifera HOM05D004618 ORTHO05D005318 9.6e-51 204.5 122 74.6
GSVIVG01003592001 Vitis vinifera HOM05D004618 ORTHO05D005318 9.6e-51 204.5 122 74.6
GSVIVG01034307001 Vitis vinifera HOM05D004618 ORTHO05D005318 9.6e-51 204.5 122 74.6
ECA248G0292 Erigeron canadensis HOM05D004618 ORTHO05D005318 1.6e-50 203.8 121 74.4
HanXRQChr10g0310121 Helianthus annuus HOM05D004618 ORTHO05D005318 1.6e-50 203.8 121 74.4
GSVIVG01013292001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.6e-50 203.8 122 74.6
TAR365G1130 Trochodendron aralioides HOM05D004618 ORTHO05D005318 1.2e-48 197.6 120 75.8
Cfa014885 Carpinus fangiana HOM05D004618 ORTHO05D005318 2.6e-48 196.4 121 72.7
Duzib212G0527 Durio zibethinus HOM05D004618 ORTHO05D005318 4.5e-48 195.7 121 70.2
Gohir.A09G052300 Gossypium hirsutum HOM05D004618 ORTHO05D005318 4.5e-48 195.7 121 70.2
Gohir.D09G052960 Gossypium hirsutum HOM05D004618 ORTHO05D005318 4.5e-48 195.7 121 69.4
Thecc.04G208200 Theobroma cacao HOM05D004618 ORTHO05D005318 7.6e-48 194.9 121 72.7
Nn1g07791 Nelumbo nucifera HOM05D004618 ORTHO05D005318 9.9e-48 194.5 121 72.7
Potri.001G050300 Populus trichocarpa HOM05D004618 ORTHO05D005318 1.3e-47 194.1 121 71.1
Gorai.006G056100 Gossypium raimondii HOM05D004618 ORTHO05D005318 2.2e-47 193.4 121 68.6
Nitab4.5_0000306g0090 Nicotiana tabacum HOM05D004618 ORTHO05D005318 2.9e-47 193.0 121 75.2
Haze_11582 Corylus avellana HOM05D004618 ORTHO05D005318 4.9e-47 192.2 121 71.1
Cc03_g07450 Coffea canephora HOM05D004618 ORTHO05D005318 2.4e-46 189.9 120 74.2
FAN17G0872 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.4e-46 189.9 121 71.1
GSVIVG01012969001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.2e-46 189.5 122 68.9
CANSAT78G0267 Cannabis sativa HOM05D004618 ORTHO05D005318 4.2e-46 189.1 121 72.7
Sabra01G0035200 Salix brachista HOM05D004618 ORTHO05D005318 5.5e-46 188.7 115 71.3
Ciclev10006732m.g Citrus clementina HOM05D004618 ORTHO05D005318 7.1e-46 188.3 121 68.6
Migut.N00349 Erythranthe guttata HOM05D004618 ORTHO05D005318 1.6e-45 187.2 121 71.1
FvH4_4g00330 Fragaria vesca HOM05D004618 ORTHO05D005318 2.7e-45 186.4 121 70.2
FAN22G1357 Fragaria x ananassa HOM05D004618 ORTHO05D005318 3.5e-45 186.0 121 70.2
Manes.15G051466 Manihot esculenta HOM05D004618 ORTHO05D005318 3.5e-45 186.0 121 64.5
MD09G1000200 Malus domestica HOM05D004618 ORTHO05D005318 4.6e-45 185.7 121 68.6
Solyc09g091650.3 Solanum lycopersicum HOM05D004618 ORTHO05D005318 4.6e-45 185.7 121 71.1
RcHm_v2.0_Chr4g0385211 Rosa chinensis HOM05D004618 ORTHO05D005318 6.0e-45 185.3 121 69.4
FAN12G0850 Fragaria x ananassa HOM05D004618 ORTHO05D005318 7.9e-45 184.9 121 69.4
CiPaw.01G124800 Carya illinoinensis HOM05D004618 ORTHO05D005318 1.0e-44 184.5 121 65.3
Lalb_Chr03g0036601 Lupinus albus HOM05D004618 ORTHO05D005318 1.0e-44 184.5 116 70.7
Medtr1g047790 Medicago truncatula HOM05D004618 ORTHO05D005318 1.3e-44 184.1 121 68.6
Sopen09g034560 Solanum pennellii HOM05D004618 ORTHO05D005318 2.3e-44 183.3 121 70.2
TWI09G1249 Tripterygium wilfordii HOM05D004618 ORTHO05D005318 5.1e-44 182.2 115 71.3
MSTRG.24629 Avicennia marina HOM05D004618 ORTHO05D005318 6.7e-44 181.8 121 71.1
Prupe.3G316000 Prunus persica HOM05D004618 ORTHO05D005318 8.7e-44 181.4 121 64.5
Glyma.20G075951 Glycine max HOM05D004618 ORTHO05D005318 1.1e-43 181.0 121 65.3
MBI07_g23668_MAGBIO Magnolia biondii HOM05D004618 ORTHO05D005318 1.1e-43 181.0 134 64.9
Phvul.007G235800 Phaseolus vulgaris HOM05D004618 ORTHO05D005318 1.1e-43 181.0 121 65.3
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 1.9e-43 180.3 121 62.8
unitig_21.g20007 Utricularia gibba HOM05D004618 ORTHO05D005318 2.5e-43 179.9 146 57.5
Psat6g048480 Pisum sativum HOM05D004618 ORTHO05D005318 3.3e-43 179.5 116 70.7
SGA_v2.0_scaffold323G48644 Striga asiatica HOM05D004618 ORTHO05D005318 4.3e-43 179.1 121 68.6
AL1G14450 Arabidopsis lyrata HOM05D004618 ORTHO05D005318 5.6e-43 178.7 121 66.1
AT1G04730 Arabidopsis thaliana HOM05D004618 ORTHO05D005318 5.6e-43 178.7 121 65.3
Carub.0001s0398 Capsella rubella HOM05D004618 ORTHO05D005318 7.4e-43 178.3 121 66.1
CAN.G500.60 Capsicum annuum HOM05D004618 ORTHO05D005318 9.6e-43 177.9 121 68.6
CARHR004120 Cardamine hirsuta HOM05D004618 ORTHO05D005318 9.6e-43 177.9 121 65.3
PSO063G1896 Papaver somniferum HOM05D004618 ORTHO05D005318 9.6e-43 177.9 121 70.2
Eucgr.H02841 Eucalyptus grandis HOM05D004618 ORTHO05D005318 1.3e-42 177.6 121 63.6
PSO017G2612 Papaver somniferum HOM05D004618 ORTHO05D005318 3.7e-42 176.0 121 69.4
Glyma.10G123400 Glycine max HOM05D004618 ORTHO05D005318 6.2e-42 175.3 121 62.0
THA.LOC104826111 Tarenaya hassleriana HOM05D004618 ORTHO05D005318 8.2e-42 174.9 121 66.1
Ca_13906_v3 Cicer arietinum L. HOM05D004618 ORTHO05D005318 1.4e-41 174.1 121 65.3
Lj6g0012936 Lotus japonicus HOM05D004618 ORTHO05D005318 2.4e-41 173.3 121 63.6
Aqoxy2G03762 Aquilegia oxysepala HOM05D004618 ORTHO05D005318 4.0e-41 172.6 121 63.6
Sp1g03570 Schrenkiella parvula HOM05D004618 ORTHO05D005318 4.0e-41 172.6 121 62.8
Os03g0264800 Oryza sativa ssp. japonica HOM05D004618 ORTHO05D005318 6.9e-41 171.8 121 65.3
MELO3C006327.2 Cucumis melo HOM05D004618 ORTHO05D005318 9.0e-41 171.4 116 63.8
A10p03150 Brassica napus HOM05D004618 ORTHO05D005318 2.0e-40 170.2 121 61.2
C05p02920 Brassica napus HOM05D004618 ORTHO05D005318 2.0e-40 170.2 121 61.2
BraA10t42588Z Brassica rapa HOM05D004618 ORTHO05D005318 2.0e-40 170.2 121 61.2
Thhalv10006720m.g Eutrema salsugineum HOM05D004618 ORTHO05D005318 5.8e-40 168.7 121 61.2
BolC5t29073H Brassica oleracea HOM05D004618 ORTHO05D005318 1.0e-39 167.9 116 63.8
ClCG05G003490 Citrullus lanatus HOM05D004618 ORTHO05D005318 1.3e-39 167.5 116 63.8
Sc19g0007110 Simmondsia chinensis HOM05D004618 ORTHO05D005318 2.2e-39 166.8 121 60.3
CsaV3_3G011150 Cucumis sativus L. HOM05D004618 ORTHO05D005318 2.9e-39 166.4 116 62.1
AUR62020811 Chenopodium quinoa HOM05D004618 ORTHO05D005318 4.9e-39 165.6 115 63.5
Sed0003506 Sechium edule HOM05D004618 ORTHO05D005318 8.4e-39 164.9 116 62.1
EL10Ac3g07492 Beta vulgaris HOM05D004618 ORTHO05D005318 3.2e-38 162.9 121 59.5
Peaxi162Scf00047g01035 Petunia axillaris HOM05D004618 ORTHO05D005318 5.5e-38 162.2 121 67.8
Zm00001eb011700 Zea mays HOM05D004618 ORTHO05D005318 5.5e-38 162.2 121 60.3
arahy.Tifrunner.gnm1.ann1.30ZQL1 Arachis hypogaea HOM05D004618 ORTHO05D005318 9.3e-38 161.4 146 52.7
arahy.Tifrunner.gnm1.ann1.NE6RSN Arachis hypogaea HOM05D004618 ORTHO05D005318 2.7e-37 159.8 146 52.7
ATR1126G077 Amborella trichopoda HOM05D004618 ORTHO05D005318 6.0e-37 158.7 121 63.6
Ah.13g078120 Amaranthus hybridus HOM05D004618 ORTHO05D005318 8.7e-36 154.8 121 57.9
HPP92_001457 Vanilla planifolia HOM05D004618 ORTHO05D005318 9.7e-35 151.4 120 58.3
HPP92_001444 Vanilla planifolia HOM05D004618 ORTHO05D005318 2.1e-34 150.2 120 57.5
GSVIVG01034323001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.4e-33 147.5 93 72.0
SalBow3G3268 Salvia bowleyana HOM05D004618 ORTHO05D005318 5.3e-33 145.6 104 67.3
SEGI_18128 Sequoiadendron giganteum HOM05D004618 ORTHO05D005318 1.0e-31 141.4 116 60.3
SHI01092 Sapria himalayana HOM05D004618 ORTHO05D005318 1.3e-31 141.0 115 52.2
BolC8t46953H Brassica oleracea HOM05D004618 ORTHO05D005318 2.9e-31 139.8 121 55.4
TPR.G19802 Trifolium pratense HOM05D004618 ORTHO05D005318 1.1e-30 137.9 147 50.3
Aa31LG1G20160 Aethionema arabicum HOM05D004618 ORTHO05D005318 3.0e-28 129.8 121 54.5
C08p01440 Brassica napus HOM05D004618 ORTHO05D005318 1.5e-27 127.5 117 49.6
BcaC07g36884 Brassica carinata HOM05D004618 ORTHO05D005318 9.7e-27 124.8 84 64.3
GSVIVG01029095001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.8e-26 123.2 93 62.4
Atru.chr4.1755 Acer truncatum HOM05D004618 ORTHO05D005318 1.5e-24 117.5 79 65.8
GSVIVG01003879001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.0e-23 114.8 67 73.1
Mapoly0122s0062 Marchantia polymorpha HOM05D004618 ORTHO05D005318 1.2e-21 107.8 112 41.1
Pp3c7_23730 Physcomitrium patens HOM05D004618 ORTHO05D005318 1.2e-21 107.8 111 45.9
CBR_g33934 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-18 97.8 117 35.9
GSVIVG01012955001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.7e-18 97.4 60 73.3
AagrBONN_evm.TU.Sc2ySwM_228.5703 Anthoceros agrestis HOM05D004618 ORTHO05D005318 2.5e-14 83.6 98 36.7
TPR.G34820 Trifolium pratense HOM05D004618 ORTHO05D005318 3.0e-12 76.6 54 63.0
Cre16.g686950 Chlamydomonas reinhardtii HOM05D004618 ORTHO05D005318 5.5e-06 55.8 80 30.0


User provided reference genes

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