Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C493G6 Lonicera japonica HOM05D000264 ORTHO05D000152 5.5e-56 221.1 143 100.0
Lj3C487G1 Lonicera japonica HOM05D000264 ORTHO05D000152 2.9e-49 198.7 139 90.6
Lj3C462G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-48 196.1 139 89.2
Lj3A465G35 Lonicera japonica HOM05D000264 ORTHO05D000152 9.4e-48 193.7 139 92.1
Lj3A488T25 Lonicera japonica HOM05D000264 ORTHO05D000152 9.4e-48 193.7 139 90.6
Lj3C494G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-45 186.4 139 77.7
Lj3A489T26 Lonicera japonica HOM05D000264 ORTHO05D000152 3.7e-44 181.8 139 83.5
Lj3C490G4 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-43 179.5 139 87.1
Lj3C489G7 Lonicera japonica HOM05D000264 ORTHO05D000152 1.7e-41 172.9 139 86.3
Lj3A466T17 Lonicera japonica HOM05D000264 ORTHO05D000152 5.0e-41 171.4 136 76.5
Lj3A465G34 Lonicera japonica HOM05D000264 ORTHO05D000152 3.1e-35 152.1 139 80.6
Lj3C492G1 Lonicera japonica HOM05D000264 ORTHO05D000152 3.1e-35 152.1 139 79.1
Lj3C493G8 Lonicera japonica HOM05D000264 ORTHO05D000152 3.1e-35 152.1 139 79.1
Lj3A495T11 Lonicera japonica HOM05D000264 ORTHO05D000152 3.8e-33 145.2 139 61.9
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 8.6e-33 144.1 137 64.2
Lj3P792T9 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-30 136.7 137 61.3
Lj3A780G50 Lonicera japonica HOM05D000264 ORTHO05D000152 6.4e-28 127.9 137 60.6
Lj7A208G29 Lonicera japonica HOM05D000264 ORTHO05D000152 1.2e-23 113.6 137 65.0
Lj3A730T42 Lonicera japonica HOM05D000264 ORTHO05D000152 2.7e-18 95.9 136 41.2
Lj3A491T20 Lonicera japonica HOM05D000264 ORTHO05D000152 7.8e-18 94.4 86 70.9
Lj3A789G30 Lonicera japonica HOM05D000264 ORTHO05D000152 3.0e-17 92.4 142 54.2
Lj3A730T43 Lonicera japonica HOM05D000264 ORTHO05D000152 8.6e-17 90.9 91 51.6
Lj3P492T9 Lonicera japonica HOM05D000264 ORTHO05D000152 8.6e-17 90.9 85 68.2
Lj3C731T3 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-16 90.1 91 51.6
Lj3C788T7 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-16 90.1 142 43.0
Lj3A788T32 Lonicera japonica HOM05D000264 ORTHO05D000152 7.3e-16 87.8 142 50.7
Lj3A782T27 Lonicera japonica HOM05D000264 ORTHO05D000152 9.5e-16 87.4 142 50.7
Lj3A783G54 Lonicera japonica HOM05D000264 ORTHO05D000152 2.1e-15 86.3 142 45.8
Lj3A786T50 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-14 83.6 142 50.0
Lj5C330G1 Lonicera japonica HOM05D000264 ORTHO05D000152 8.9e-14 80.9 144 47.9
Lj5A330T28 Lonicera japonica HOM05D000264 ORTHO05D000152 2.6e-13 79.3 141 36.9
Lj5A330G31 Lonicera japonica HOM05D000264 ORTHO05D000152 1.7e-12 76.6 144 45.8
Lj3A783G53 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-12 74.3 106 61.3
Lj3C788T6 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-12 74.3 106 61.3
Lj5A329T14 Lonicera japonica HOM05D000264 ORTHO05D000152 8.3e-12 74.3 137 47.4
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.9e-11 73.2 99 42.4
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-11 73.2 113 40.7
Lj3C783T3 Lonicera japonica HOM05D000264 ORTHO05D000152 2.4e-11 72.8 112 59.8
Rhsim04G0191500 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.2e-11 70.9 98 38.8
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.6e-10 70.1 113 32.7
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 6.0e-10 68.2 98 46.9
Dinv09002 Davidia involucrata HOM05D000264 ORTHO05D000152 6.0e-10 68.2 99 38.4
Lj3A784T13 Lonicera japonica HOM05D000264 ORTHO05D000152 6.0e-10 68.2 138 34.1
Hma1.2p1_1193F.1_g265640 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.8e-10 67.8 100 41.0
Lj6C648T1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.0e-09 67.4 97 40.2
Lj6A649T19 Lonicera japonica HOM05D000264 ORTHO05D000152 1.3e-09 67.0 98 52.0
Dinv44627 Davidia involucrata HOM05D000264 ORTHO05D000152 1.7e-09 66.6 67 50.7
Lj3A783G51 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-09 66.2 99 48.5
Lj6P649T13 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-09 66.2 98 39.8
Lj3A718T89 Lonicera japonica HOM05D000264 ORTHO05D000152 3.9e-09 65.5 92 42.4
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 8.6e-09 64.3 98 45.9
Lj3A790T26 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-08 63.5 68 50.0
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 3.3e-08 62.4 139 33.1
Lj3A383T15 Lonicera japonica HOM05D000264 ORTHO05D000152 4.3e-08 62.0 68 55.9
Lj3C673G1 Lonicera japonica HOM05D000264 ORTHO05D000152 5.6e-08 61.6 68 51.5
Lj3C792T0 Lonicera japonica HOM05D000264 ORTHO05D000152 7.3e-08 61.2 67 49.3
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-07 60.5 67 44.8
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 1.6e-07 60.1 67 43.3
Lj3A793G38 Lonicera japonica HOM05D000264 ORTHO05D000152 1.6e-07 60.1 92 40.2
Lj3A661G20 Lonicera japonica HOM05D000264 ORTHO05D000152 2.1e-07 59.7 68 50.0
CSS0044576 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.8e-07 59.3 116 48.3
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 2.8e-07 59.3 67 41.8
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.8e-07 59.3 101 33.7
GSVIVG01020895001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.6e-07 58.9 116 33.6
CSS0046265 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 6.2e-07 58.2 95 33.7
CSS0036307 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 8.1e-07 57.8 144 30.6
Hma1.2p1_1193F.1_g265580 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 8.1e-07 57.8 137 28.5
Dinv06866 Davidia involucrata HOM05D000264 ORTHO05D000152 1.1e-06 57.4 67 40.3
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.1e-06 57.4 138 29.7
Lj4A628G55 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-06 57.4 67 40.3
CSS0002954 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-06 57.0 98 34.7
CSS0044717 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-06 57.0 98 34.7
Lj3A384G20 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-06 57.0 92 38.0
Lj3A670G8 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-06 57.0 92 52.2
CSS0002232 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.1e-06 55.8 59 47.5
Dinv44623 Davidia involucrata HOM05D000264 ORTHO05D000152 3.1e-06 55.8 67 37.3
Dinv44629 Davidia involucrata HOM05D000264 ORTHO05D000152 3.1e-06 55.8 67 44.8
Lj3C662T1 Lonicera japonica HOM05D000264 ORTHO05D000152 4.0e-06 55.5 100 51.0
Lj5A331T37 Lonicera japonica HOM05D000264 ORTHO05D000152 5.2e-06 55.1 102 35.3
Rhsim04G0193100 Rhododendron simsii HOM05D000264 ORTHO05D000152 6.8e-06 54.7 98 42.9
Cc11_g07970 Coffea canephora HOM05D000264 ORTHO05D000152 8.9e-06 54.3 139 34.5
Dinv29921 Davidia involucrata HOM05D000264 ORTHO05D000152 8.9e-06 54.3 99 35.4
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 8.9e-06 54.3 100 33.0


User provided reference genes

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