Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C358T2 Lonicera japonica HOM05D000094 ORTHO05D012275 1.4e-40 169.1 80 100.0
Lj3C358T0 Lonicera japonica HOM05D000094 ORTHO05D002388 4.1e-24 114.4 76 72.4
Lj3P376T33 Lonicera japonica HOM05D000094 ORTHO05D002388 2.6e-23 111.7 76 71.1
Lj3P357T40 Lonicera japonica HOM05D000094 ORTHO05D002388 7.7e-23 110.2 76 69.7
Lj3P376T20 Lonicera japonica HOM05D000094 ORTHO05D002388 7.7e-23 110.2 76 69.7
Dinv44210 Davidia involucrata HOM05D000094 ORTHO05D017818 2.6e-15 85.1 72 61.1
Dinv22707 Davidia involucrata HOM05D000094 ORTHO05D002388 4.5e-15 84.3 74 58.1
TAR362G0036 Trochodendron aralioides HOM05D000094 ORTHO05D002388 5.9e-15 84.0 76 56.6
Nitab4.5_0002313g0050 Nicotiana tabacum HOM05D000094 ORTHO05D002388 1.0e-14 83.2 76 57.9
CAN.G710.52 Capsicum annuum HOM05D000094 ORTHO05D002388 2.9e-14 81.6 75 56.0
Nitab4.5_0006213g0030 Nicotiana tabacum HOM05D000094 ORTHO05D002388 3.8e-14 81.3 76 56.6
CSS0018977 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 5.0e-14 80.9 75 54.7
CSS0020762 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D002388 5.0e-14 80.9 75 54.7
Peaxi162Scf00286g00028 Petunia axillaris HOM05D000094 ORTHO05D002388 3.2e-13 78.2 68 58.8
Hma1.2p1_1286F.1_g273120 Hydrangea macrophylla HOM05D000094 ORTHO05D002388 7.2e-13 77.0 69 59.4
Solyc09g098420.3 Solanum lycopersicum HOM05D000094 ORTHO05D002388 1.6e-12 75.9 79 55.7
Sopen09g036350 Solanum pennellii HOM05D000094 ORTHO05D002388 1.6e-12 75.9 79 55.7
PGSC0003DMG400021622 Solanum tuberosum HOM05D000094 ORTHO05D002388 1.6e-12 75.9 79 55.7
DCAR_023799 Daucus carota HOM05D000094 ORTHO05D002388 2.7e-12 75.1 75 56.0
Cc03_g10840 Coffea canephora HOM05D000094 ORTHO05D002388 4.7e-12 74.3 70 52.9
Oeu050347.1 Olea europaea HOM05D000094 ORTHO05D002388 8.0e-12 73.6 71 53.5
Migut.G01136 Erythranthe guttata HOM05D000094 ORTHO05D002388 1.0e-11 73.2 82 50.0
PSO017G1116 Papaver somniferum HOM05D000094 ORTHO05D002388 1.0e-11 73.2 73 49.3
PSO675G4842 Papaver somniferum HOM05D000094 ORTHO05D002388 1.0e-11 73.2 73 49.3
Actinidia39097 Actinidia chinensis HOM05D000094 ORTHO05D002388 2.3e-11 72.0 75 54.7
Actinidia26044 Actinidia chinensis HOM05D000094 ORTHO05D002388 6.7e-11 70.5 75 52.0
Nn1g09888 Nelumbo nucifera HOM05D000094 ORTHO05D002388 6.7e-11 70.5 74 48.6
Rhsim02G0071600 Rhododendron simsii HOM05D000094 ORTHO05D002388 8.8e-11 70.1 74 50.0
HanXRQChr10g0293931 Helianthus annuus HOM05D000094 ORTHO05D002388 1.5e-10 69.3 77 48.1
SGA_v2.0_scaffold17G08040 Striga asiatica HOM05D000094 ORTHO05D002388 2.6e-10 68.6 71 52.1
GSVIVG01031661001 Vitis vinifera HOM05D000094 ORTHO05D002388 3.3e-10 68.2 69 50.7
AUR62018484 Chenopodium quinoa HOM05D000094 ORTHO05D002388 5.7e-10 67.4 72 50.0
AUR62020939 Chenopodium quinoa HOM05D000094 ORTHO05D002388 5.7e-10 67.4 72 50.0
Aqoxy2G04065 Aquilegia oxysepala HOM05D000094 ORTHO05D002388 7.5e-10 67.0 71 47.9
Sc25g0005630 Simmondsia chinensis HOM05D000094 ORTHO05D002388 9.7e-10 66.6 69 52.2
Pp3c22_12040 Physcomitrium patens HOM05D000094 ORTHO05D002388 1.3e-09 66.2 70 44.3
Pp3c19_18410 Physcomitrium patens HOM05D000094 ORTHO05D002388 2.8e-09 65.1 70 42.9
Ah.04g149870 Amaranthus hybridus HOM05D000094 ORTHO05D002388 3.7e-09 64.7 72 48.6
EL10Ac3g07393 Beta vulgaris HOM05D000094 ORTHO05D002388 8.2e-09 63.5 73 43.8
Os01g0917500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D002388 8.2e-09 63.5 65 53.8
Zm00001eb364710 Zea mays HOM05D000094 ORTHO05D012275 1.4e-08 62.8 66 50.0
ECA238G0840 Erigeron canadensis HOM05D000094 ORTHO05D002388 2.4e-08 62.0 71 47.9
SalBow2G1236 Salvia bowleyana HOM05D000094 ORTHO05D002388 2.4e-08 62.0 65 50.8
Zm00001eb143420 Zea mays HOM05D000094 ORTHO05D002388 3.1e-08 61.6 65 53.8
Pp3c14_16840 Physcomitrium patens HOM05D000094 ORTHO05D002388 4.1e-08 61.2 70 42.9
Lsat_1_v5_gn_2_48221 Lactuca sativa HOM05D000094 ORTHO05D002388 1.2e-07 59.7 71 49.3
SMO116G0416 Selaginella moellendorffii HOM05D000094 ORTHO05D002388 1.6e-07 59.3 68 47.1
SMO195G0038 Selaginella moellendorffii HOM05D000094 ORTHO05D002388 1.6e-07 59.3 68 47.1
SEGI_06180 Sequoiadendron giganteum HOM05D000094 ORTHO05D002388 2.2e-06 55.5 69 43.5
Mapoly0011s0213 Marchantia polymorpha HOM05D000094 ORTHO05D002388 2.9e-06 55.1 70 40.0
Zm00001eb236440 Zea mays HOM05D000094 ORTHO05D002388 2.9e-06 55.1 69 44.9
CDE09G1099 Ceratophyllum demersum HOM05D000094 ORTHO05D002388 3.8e-06 54.7 70 40.0


User provided reference genes

Program Settings