Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 2.4e-200 703.0 421 100.0
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 2.5e-120 437.2 275 83.6
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 1.1e-91 342.0 434 56.2
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 2.8e-84 317.4 414 52.2
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 3.9e-81 307.0 334 68.0
Lj3C325T0 Lonicera japonica HOM05D008657 ORTHO05D010869 1.7e-76 291.6 149 97.3
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 7.5e-69 266.2 443 53.0
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 8.3e-68 262.7 428 54.7
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 1.9e-67 261.5 326 59.5
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 1.9e-64 251.5 323 63.2
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 4.9e-60 236.9 424 38.0
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 4.1e-59 233.8 390 52.3
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 4.6e-58 230.3 431 50.6
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.9e-56 224.9 330 60.0
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 5.6e-56 223.4 348 47.1
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 2.4e-54 218.0 422 41.9
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 1.9e-51 208.4 432 38.2
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 1.2e-50 205.7 424 39.9
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 1.6e-50 205.3 331 36.9
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 2.7e-50 204.5 427 44.7
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 8.7e-49 199.5 305 39.0
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 3.3e-48 197.6 321 48.6
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 9.6e-48 196.1 364 45.1
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 9.6e-48 196.1 431 47.3
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 2.8e-47 194.5 335 40.0
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 4.8e-47 193.7 332 40.7
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 6.2e-47 193.4 332 53.3
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 8.1e-47 193.0 332 40.7
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 1.1e-46 192.6 332 40.4
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 2.4e-46 191.4 322 48.4
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 3.1e-46 191.0 332 40.1
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 2.0e-45 188.3 332 52.7
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 9.9e-45 186.0 323 49.5
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 1.3e-44 185.7 321 48.0
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 8.4e-44 183.0 448 44.9
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.6e-42 178.7 330 53.6
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 7.8e-42 176.4 330 53.3
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 8.1e-39 166.4 324 45.4
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 6.9e-38 163.3 328 51.5
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 1.5e-37 162.2 238 65.5
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 4.3e-32 144.1 147 52.4
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 6.2e-31 140.2 331 48.9
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 7.6e-21 106.7 97 56.7
Gohir.D06G179000 Gossypium hirsutum HOM05D008657 ORTHO05D010869 2.2e-12 78.6 201 57.2
Nn7g37112 Nelumbo nucifera HOM05D008657 ORTHO05D010869 5.1e-09 67.4 54 57.4
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 6.7e-09 67.0 160 27.5
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 4.3e-08 64.3 169 26.0
HPP92_001299 Vanilla planifolia HOM05D007291 ORTHO05D009038 7.4e-08 63.5 202 25.7
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 1.3e-07 62.8 187 25.1
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 1.7e-07 62.4 182 24.7
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.2e-07 62.0 164 25.6
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 2.8e-07 61.6 154 28.6
Atru.chr11.1049 Acer truncatum HOM05D007496 ORTHO05D009479 3.7e-07 61.2 150 30.0
PSO339G2893 Papaver somniferum HOM05D007455 ORTHO05D009431 3.7e-07 61.2 173 25.4
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 4.8e-07 60.8 220 22.3
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 6.3e-07 60.5 196 25.5
Glyma.08G090700 Glycine max HOM05D007496 ORTHO05D009479 1.1e-06 59.7 169 27.2
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 1.1e-06 59.7 163 27.6
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 1.1e-06 59.7 162 22.8
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 1.8e-06 58.9 171 25.1
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.8e-06 58.9 163 23.9
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 3.1e-06 58.2 165 26.1
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 3.1e-06 58.2 239 20.5
Hund25149 Selenicereus undatus HOM05D007623 ORTHO05D009641 3.1e-06 58.2 184 28.3
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 3.1e-06 58.2 160 25.6
CDE02G2030 Ceratophyllum demersum HOM05D006819 ORTHO05D008763 4.1e-06 57.8 178 24.7
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 4.1e-06 57.8 163 24.5
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 5.3e-06 57.4 162 24.7
COL.COLO4_05199 Corchorus olitorius HOM05D007455 ORTHO05D009431 5.3e-06 57.4 151 24.5
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 5.3e-06 57.4 166 24.1
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 6.9e-06 57.0 155 31.0
Psat0s1866g0040 Pisum sativum HOM05D007496 ORTHO05D009479 6.9e-06 57.0 203 25.6


User provided reference genes

Program Settings