Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C28T9 Lonicera japonica HOM05D000004 ORTHO05D000002 5.3e-127 457.6 218 100.0
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-17 94.0 367 24.5
Rhsim11G0145700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.5e-15 87.4 210 31.9
Lju41C47T6 Lonicera japonica HOM05D000004 ORTHO05D000002 4.2e-15 85.9 115 40.9
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 5.5e-15 85.5 90 48.9
Rhsim06G0000800 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.5e-15 85.5 294 26.9
RhsimUnG0031100 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.1e-14 82.0 95 44.2
AUR62026446 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.0e-13 79.3 281 27.0
Lj7C389T3 Lonicera japonica HOM05D000004 ORTHO05D000002 6.7e-13 78.6 158 31.6
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-12 77.0 95 43.2
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.4e-12 75.9 315 22.5
Lj6C258T1 Lonicera japonica HOM05D000004 ORTHO05D000002 7.5e-12 75.1 72 52.8
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 9.7e-12 74.7 140 32.9
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.7e-12 74.7 296 25.7
Hma1.2p1_1059F.1_g253000 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.2e-11 73.6 95 40.0
Hma1.2p1_0261F.1_g104790 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.8e-11 73.2 100 41.0
Lju470C18G3 Lonicera japonica HOM05D000004 ORTHO05D000002 2.8e-11 73.2 134 34.3
Psat5g240320 Pisum sativum HOM05D003122 ORTHO05D000002 3.7e-11 72.8 94 41.5
Lj4C85T15 Lonicera japonica HOM05D000004 ORTHO05D000002 4.8e-11 72.4 72 47.2
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-11 72.4 95 35.8
PSO339G4620 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-10 70.9 65 47.7
Hma1.2p1_0140F.1_g063515 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.1e-10 69.3 117 36.8
Hma1.2p1_1530F.1_g289210 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.1e-10 69.3 117 36.8
PSO063G1275 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-10 69.3 71 47.9
Rhsim09G0107500 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.1e-10 69.3 164 26.8
PSO111G0068 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-10 68.9 97 39.2
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-10 68.9 116 34.5
Psat6g198640 Pisum sativum HOM05D003122 ORTHO05D000002 5.3e-10 68.9 132 33.3
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 68.2 70 45.7
Rhsim02G0149500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.5e-09 66.2 61 50.8
Sabra07G0076700 Salix brachista HOM05D000004 ORTHO05D000002 3.5e-09 66.2 102 38.2
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.9e-09 65.5 138 30.4
Lj3C465G7 Lonicera japonica HOM05D000004 ORTHO05D000002 5.9e-09 65.5 117 32.5
SGA_v2.0_scaffold68G22840 Striga asiatica HOM05D000004 ORTHO05D000002 5.9e-09 65.5 64 43.8
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 7.7e-09 65.1 90 37.8
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 7.7e-09 65.1 63 54.0
PSO081G0112 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-09 65.1 93 36.6
Rhsim13G0234900 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.7e-09 65.1 60 46.7
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 1.0e-08 64.7 117 32.5
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.0e-08 64.7 117 35.9
Sopen00g005290 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 64.7 80 43.8
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 64.7 80 43.8
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.3e-08 64.3 117 32.5
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 1.3e-08 64.3 63 50.8
PSO063G1731 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-08 64.3 59 47.5
PSO541G0038 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-08 64.3 80 42.5
Rhsim12G0205800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-08 64.3 122 35.2
Ca_13623_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.7e-08 63.9 45 62.2
Ca_13628_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.7e-08 63.9 45 62.2
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 1.7e-08 63.9 117 31.6
PSO832G1141 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.9 64 42.2
Psat5g266960 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-08 63.9 101 36.6
Psat5g288800 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-08 63.9 84 39.3
Actinidia03923 Actinidia chinensis HOM05D000004 ORTHO05D000002 2.2e-08 63.5 110 33.6
Psat4g107520 Pisum sativum HOM05D000004 ORTHO05D000002 2.9e-08 63.2 70 41.4
Rhsim01G0051200 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.9e-08 63.2 78 46.2
PSO832G1248 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 62.8 59 44.1
Psat1g175440 Pisum sativum HOM05D000004 ORTHO05D000002 3.8e-08 62.8 70 41.4
Psat4g223680 Pisum sativum HOM05D000004 ORTHO05D011729 3.8e-08 62.8 62 48.4
CAN.G375.35 Capsicum annuum HOM05D000004 ORTHO05D000002 5.0e-08 62.4 75 45.3
Ca_20514_v3 Cicer arietinum L. HOM05D000004 ORTHO05D012218 5.0e-08 62.4 45 60.0
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-08 62.4 72 43.1
PSO063G3211 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.4 127 31.5
PSO170G3513 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.4 59 44.1
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.4 111 29.7
Psat3g064840 Pisum sativum HOM05D000004 ORTHO05D000002 5.0e-08 62.4 95 36.8
TPR.G15572 Trifolium pratense HOM05D000004 ORTHO05D000002 5.0e-08 62.4 63 46.0
ECA232G2477 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-08 62.0 73 47.9
ECA248G2938 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-08 62.0 53 58.5
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-08 62.0 70 42.9
Rhsim01G0254600 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.5e-08 62.0 60 46.7
RhsimUnG0001600 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.5e-08 62.0 56 53.6
Lj9P680T17 Lonicera japonica HOM05D000004 ORTHO05D000002 8.5e-08 61.6 133 30.8
PSO455G0227 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-08 61.6 59 47.5
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-08 61.6 53 49.1
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-08 61.6 67 46.3
Ca_12944_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-07 61.2 60 50.0
Ca_25300_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-07 61.2 45 62.2
ECA247G1596 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-07 61.2 58 50.0
PSO447G0246 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 61.2 185 26.5
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 126 34.1
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 74 45.9
Psat4g108200 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-07 60.8 76 42.1
Sopen12g010440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.8 67 44.8
Atru.chr12.2292 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-07 60.5 119 31.9
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 60.5 63 49.2
PSO210G7166 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 60.5 59 45.8
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-07 60.5 64 45.3
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-07 60.5 67 44.8
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 2.5e-07 60.1 115 32.2
Psat4g144760 Pisum sativum HOM05D000045 ORTHO05D001346 2.5e-07 60.1 63 46.0
CAN.G95.11 Capsicum annuum HOM05D000004 ORTHO05D000002 3.2e-07 59.7 81 42.0
MD14G1073200 Malus domestica HOM05D000004 ORTHO05D000002 3.2e-07 59.7 95 33.7
PSO782G2672 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-07 59.7 72 41.7
Sopen04g007630 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-07 59.7 67 46.3
Lj9P307T30 Lonicera japonica HOM05D000004 ORTHO05D000002 4.2e-07 59.3 116 31.0
PSO063G6355 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-07 59.3 69 40.6
PSO339G2726 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-07 59.3 64 48.4
RhsimUnG0030900 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.2e-07 59.3 55 49.1
Sopen01g025150 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-07 59.3 67 44.8
ECA234G2197 Erigeron canadensis HOM05D000560 ORTHO05D000417 5.5e-07 58.9 42 61.9
ECA238G1046 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-07 58.9 88 38.6
Hma1.2p1_0085F.1_g044720 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.5e-07 58.9 76 42.1
PSO210G7018 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-07 58.9 198 28.8
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.2e-07 58.5 68 42.6
Dinv02028 Davidia involucrata HOM05D000004 ORTHO05D000002 7.2e-07 58.5 59 45.8
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 58.5 87 36.8
Rhsim01G0083100 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.2e-07 58.5 79 40.5
Hma1.2p1_0491F.1_g164540 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-07 58.2 80 38.8
PSO700G0030 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-07 58.2 105 31.4
TPR.G15426 Trifolium pratense HOM05D000004 ORTHO05D000002 9.4e-07 58.2 58 48.3
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 104 34.6
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 43 58.1
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 58 48.3
PSO675G9263 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 57.8 58 41.4
Rhsim07G0103000 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.2e-06 57.8 67 38.8
RcHm_v2.0_Chr3g0473251 Rosa chinensis HOM05D000004 ORTHO05D000002 1.2e-06 57.8 67 44.8
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 1.2e-06 57.8 51 52.9
Ca_13854_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.6e-06 57.4 45 57.8
ECA232G2363 Erigeron canadensis HOM05D001542 ORTHO05D001416 1.6e-06 57.4 51 54.9
ECA233G3359 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 57.4 61 41.0
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.6e-06 57.4 53 52.8
ECA247G2318 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 57.4 64 46.9
PSO541G5443 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 57.4 213 26.3
PSO675G5742 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 57.4 117 31.6
PSO675G9287 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 57.4 116 31.9
TWI36G1188 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.6e-06 57.4 110 31.8
AUR62038964 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.1e-06 57.0 51 54.9
Ca_10095_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.1e-06 57.0 60 46.7
ECA234G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 57.0 52 51.9
Psat1g143280 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-06 57.0 128 30.5
Psat4g146400 Pisum sativum HOM05D003122 ORTHO05D000002 2.1e-06 57.0 40 62.5
Psat5g135120 Pisum sativum HOM05D000004 ORTHO05D011729 2.1e-06 57.0 58 50.0
Rhsim01G0082100 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.1e-06 57.0 79 40.5
Ca_25722_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.7e-06 56.6 56 46.4
ECA246G2677 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 56.6 109 35.8
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 56.6 46 54.3
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 56.6 38 63.2
Psat2g104000 Pisum sativum HOM05D000019 ORTHO05D000002 2.7e-06 56.6 55 49.1
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 3.6e-06 56.2 110 34.5
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.6e-06 56.2 45 57.8
ECA232G1890 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.6e-06 56.2 43 53.5
ECA246G1059 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 56.2 51 54.9
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 56.2 68 41.2
ECA247G0871 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 56.2 38 60.5
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 56.2 38 60.5
HanXRQChr01g0017871 Helianthus annuus HOM05D000004 ORTHO05D000002 3.6e-06 56.2 95 35.8
Rhsim01G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.6e-06 56.2 109 34.9
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 55.8 47 55.3
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 55.8 43 53.5
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 55.8 95 35.8
Hma1.2p1_0199F.1_g085740 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.7e-06 55.8 44 52.3
Lj5C589G6 Lonicera japonica HOM05D000004 ORTHO05D000002 4.7e-06 55.8 115 31.3
PSO781G0049 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-06 55.8 117 29.1
PSO801G0540 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-06 55.8 59 44.1
Rhsim07G0125600 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 51 54.9
TWI32G1255 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.7e-06 55.8 80 36.2
CSS0042683 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-06 55.5 66 40.9
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-06 55.5 50 52.0
PSO017G1457 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-06 55.5 49 57.1
PSO210G3880 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-06 55.5 119 28.6
Rhsim01G0051500 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.1e-06 55.5 110 32.7
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-06 55.5 38 63.2
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 55.1 38 60.5
ECA234G1689 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 55.1 53 52.8
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 8.0e-06 55.1 219 23.3
Psat3g028360 Pisum sativum HOM05D003122 ORTHO05D000002 8.0e-06 55.1 55 47.3
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-06 55.1 128 29.7
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.0e-06 55.1 31 71.0
VMungo1127G1692 Vigna mungo HOM05D003065 ORTHO05D003802 8.0e-06 55.1 51 54.9


User provided reference genes

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