Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1465.7 740 100.0
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 0.0e+00 1266.1 766 86.6
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 2.3e-267 925.6 767 64.0
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 1.4e-243 846.7 773 58.5
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 2.4e-240 835.9 767 59.2
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 1.4e-235 820.1 767 57.6
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 4.5e-234 815.1 771 58.1
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.5e-229 800.0 765 56.7
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 6.5e-225 784.6 765 56.3
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 9.7e-221 770.8 769 54.6
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 6.3e-220 768.1 770 54.2
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 8.2e-220 767.7 766 53.5
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 1.8e-219 766.5 770 54.8
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 4.1e-219 765.4 769 54.7
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 6.9e-219 764.6 768 54.6
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 2.6e-218 762.7 769 54.4
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 3.4e-218 762.3 770 53.2
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 2.9e-217 759.2 764 55.0
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 6.5e-217 758.1 768 55.3
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 1.4e-216 756.9 762 54.1
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 3.2e-216 755.7 767 53.2
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 1.6e-215 753.4 771 54.2
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 2.1e-215 753.1 769 54.5
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.8e-214 750.0 769 53.7
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 2.3e-214 749.6 769 53.8
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.3e-212 743.8 768 53.1
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 1.3e-212 743.8 767 53.6
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 3.7e-212 742.3 768 53.0
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 1.8e-211 740.0 764 52.1
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 1.2e-210 737.3 767 52.9
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 2.6e-210 736.1 764 53.0
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 2.7e-207 726.1 768 52.2
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 7.4e-205 718.0 765 52.0
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 5.9e-202 708.4 764 52.0
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.6e-199 699.1 631 58.5
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 2.3e-198 696.4 759 51.8
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 3.3e-197 692.6 768 49.1
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 3.3e-197 692.6 770 49.1
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 5.7e-197 691.8 684 56.0
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.2e-193 679.9 765 49.8
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 1.9e-192 676.8 768 48.7
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 2.5e-192 676.4 759 50.7
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 5.5e-192 675.2 767 47.8
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 9.4e-192 674.5 768 48.8
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.2e-191 674.1 767 49.3
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 3.6e-191 672.5 767 49.3
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 4.7e-191 672.2 742 49.6
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 3.4e-189 666.0 761 49.5
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 5.7e-189 665.2 768 47.0
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.3e-188 664.1 768 48.6
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 1.7e-188 663.7 768 48.7
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 1.7e-188 663.7 775 48.1
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 3.7e-188 662.5 757 49.4
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 6.3e-188 661.8 767 49.7
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 2.4e-187 659.8 768 46.5
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 7.0e-187 658.3 766 49.2
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 2.7e-186 656.4 757 48.2
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 4.5e-186 655.6 769 47.7
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 2.3e-185 653.3 754 49.9
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.8e-185 652.5 767 49.2
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 1.9e-184 650.2 754 49.7
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 2.8e-183 646.4 761 49.3
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 6.1e-183 645.2 774 47.5
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 1.7e-180 637.1 768 46.5
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 9.2e-179 631.3 798 46.6
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 7.3e-176 621.7 767 45.2
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 5.8e-173 612.1 767 46.3
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 5.8e-173 612.1 766 46.2
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 9.8e-173 611.3 635 49.9
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 6.2e-167 592.0 641 48.8
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.4e-166 590.9 722 48.3
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 5.8e-165 585.5 765 43.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 8.3e-164 581.6 595 50.3
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 4.1e-163 579.3 798 43.9
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.7e-162 576.6 767 43.7
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 2.3e-161 573.5 773 44.5
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 5.2e-158 562.4 762 43.7
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 3.4e-157 559.7 696 45.0
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 3.2e-155 553.1 765 43.4
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 7.1e-155 552.0 767 43.8
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 1.7e-153 547.4 759 42.4
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 1.4e-150 537.7 767 42.1
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.4e-150 537.7 765 42.9
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.8e-150 537.3 735 42.7
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 2.4e-150 537.0 762 43.0
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 8.9e-150 535.0 767 41.5
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.4e-147 527.7 732 42.2
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.4e-147 527.7 732 42.2
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.1e-144 518.1 458 58.1
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 3.1e-142 510.0 770 40.6
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 2.1e-135 487.3 754 40.5
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 2.8e-135 486.9 707 39.5
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 3.1e-134 483.4 760 38.3
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.3e-129 468.0 738 39.6
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 2.5e-120 437.2 368 62.2
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 8.4e-116 422.2 662 40.2
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 1.5e-93 348.2 737 32.0
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 3.7e-87 327.0 606 39.1
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 8.0e-82 309.3 366 48.1
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.0e-80 304.7 501 38.3
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.5e-75 287.7 377 44.0
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 2.6e-64 251.1 403 40.7
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 4.5e-61 240.4 403 37.0
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 1.6e-50 205.3 169 59.8
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.0e-48 198.4 278 42.8
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 1.7e-47 195.3 146 63.7
Psat0s1368g0040 Pisum sativum HOM05D005651 ORTHO05D006877 9.9e-40 169.5 195 47.7
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 4.4e-32 144.1 125 57.6
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 5.4e-30 137.1 657 23.1
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 7.1e-30 136.7 116 60.3
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 3.3e-27 127.9 126 57.9
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 2.1e-26 125.2 778 22.5
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 4.8e-26 124.0 127 58.3
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 2.4e-14 85.1 65 63.1
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 4.2e-14 84.3 223 30.0
CBR_g39378 Chara braunii HOM05D005651 ORTHO05D006877 6.2e-10 70.5 146 28.8
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 9.0e-09 66.6 101 42.6


User provided reference genes

Program Settings