Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C240T1 Lonicera japonica HOM05D003887 ORTHO05D004523 5.2e-72 274.2 135 100.0
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 5.7e-63 244.2 136 89.7
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 7.5e-55 217.2 126 84.1
TAR265G0002 Trochodendron aralioides HOM05D003887 ORTHO05D004523 2.2e-54 215.7 129 81.4
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.4e-53 213.0 127 80.3
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 5.4e-53 211.1 129 79.8
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 5.4e-53 211.1 130 80.0
Nn5g28552 Nelumbo nucifera HOM05D003887 ORTHO05D004523 7.0e-53 210.7 128 78.9
PGSC0003DMG400029847 Solanum tuberosum HOM05D003887 ORTHO05D004523 1.6e-52 209.5 125 78.4
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 4.6e-52 208.0 128 78.9
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 6.0e-52 207.6 129 79.1
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 1.3e-51 206.5 126 75.4
Eucgr.G00614 Eucalyptus grandis HOM05D003887 ORTHO05D004523 1.3e-51 206.5 128 78.9
PGR142G0321 Punica granatum HOM05D003887 ORTHO05D004523 1.3e-51 206.5 129 78.3
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 2.3e-51 205.7 123 78.0
vmacro07505 Vaccinium macrocarpon HOM05D003887 ORTHO05D004523 3.0e-51 205.3 131 75.6
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 3.9e-51 204.9 129 78.3
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 5.0e-51 204.5 128 76.6
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 6.6e-51 204.1 129 76.7
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 6.6e-51 204.1 127 79.5
MBI07_g23221_MAGBIO Magnolia biondii HOM05D003887 ORTHO05D004523 6.6e-51 204.1 129 76.7
CAN.G1237.27 Capsicum annuum HOM05D003887 ORTHO05D004523 1.5e-50 203.0 122 77.0
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 1.5e-50 203.0 129 77.5
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 1.9e-50 202.6 124 76.6
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 1.9e-50 202.6 129 77.5
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 2.5e-50 202.2 124 77.4
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 4.3e-50 201.4 127 76.4
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 5.6e-50 201.1 129 76.7
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 5.6e-50 201.1 127 78.0
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 7.3e-50 200.7 128 77.3
FAN02G3629 Fragaria x ananassa HOM05D003887 ORTHO05D004523 7.3e-50 200.7 127 76.4
Sabra16G0068500 Salix brachista HOM05D003887 ORTHO05D004523 1.2e-49 199.9 126 77.0
FvH4_6g20690 Fragaria vesca HOM05D003887 ORTHO05D004523 1.6e-49 199.5 127 76.4
FAN05G1982 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.6e-49 199.5 127 76.4
FAN14G0913 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.6e-49 199.5 127 76.4
CSS0042801 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 2.1e-49 199.1 122 77.0
Migut.L01853 Erythranthe guttata HOM05D003887 ORTHO05D004523 2.8e-49 198.7 129 74.4
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 4.7e-49 198.0 122 76.2
FAN05G1871 Fragaria x ananassa HOM05D003887 ORTHO05D004523 4.7e-49 198.0 125 77.6
Hund18807 Selenicereus undatus HOM05D003887 ORTHO05D004523 4.7e-49 198.0 131 73.3
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 1.1e-48 196.8 129 73.6
Nitab4.5_0008674g0010 Nicotiana tabacum HOM05D003887 ORTHO05D004523 1.1e-48 196.8 124 74.2
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 1.1e-48 196.8 127 75.6
MD12G1043200 Malus domestica HOM05D003887 ORTHO05D004523 1.4e-48 196.4 127 75.6
Manes.08G035800 Manihot esculenta HOM05D003887 ORTHO05D004523 1.4e-48 196.4 129 74.4
DCAR_020685 Daucus carota HOM05D003887 ORTHO05D004523 1.8e-48 196.1 131 72.5
Ah.08g222240 Amaranthus hybridus HOM05D003887 ORTHO05D004523 2.3e-48 195.7 131 74.0
Peaxi162Scf00130g01133 Petunia axillaris HOM05D003887 ORTHO05D004523 2.3e-48 195.7 120 76.7
Sc06g0008630 Simmondsia chinensis HOM05D003887 ORTHO05D004523 2.3e-48 195.7 127 74.8
Aqoxy2G02430 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 3.1e-48 195.3 135 72.6
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 4.0e-48 194.9 127 74.8
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 5.2e-48 194.5 123 75.6
Sc06g0010620 Simmondsia chinensis HOM05D003887 ORTHO05D004523 5.2e-48 194.5 125 76.0
FAN09G3131 Fragaria x ananassa HOM05D003887 ORTHO05D004523 6.8e-48 194.1 127 73.2
MSTRG.26582 Avicennia marina HOM05D003887 ORTHO05D004523 8.9e-48 193.7 128 74.2
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 2.0e-47 192.6 122 76.2
Aqoxy1G00605 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 4.4e-47 191.4 135 69.6
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 7.5e-47 190.7 128 72.7
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 1.3e-46 189.9 126 73.0
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 2.2e-46 189.1 123 73.2
Rhsim03G0059700 Rhododendron simsii HOM05D003887 ORTHO05D004523 2.2e-46 189.1 146 63.7
SHI28303 Sapria himalayana HOM05D003887 ORTHO05D004523 2.2e-46 189.1 122 73.8
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 3.7e-46 188.3 126 71.4
EL10Ac7g16270 Beta vulgaris HOM05D003887 ORTHO05D004523 4.9e-46 188.0 125 74.4
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 8.3e-46 187.2 125 71.2
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 8.3e-46 187.2 126 71.4
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 8.3e-46 187.2 126 71.4
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.1e-45 186.8 126 72.2
Os09g0560500 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 1.1e-45 186.8 132 71.2
Phvul.001G197300 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 2.4e-45 185.7 128 71.1
Glyma.03G203800 Glycine max HOM05D003887 ORTHO05D004523 3.2e-45 185.3 128 71.9
Gohir.A04G113000 Gossypium hirsutum HOM05D003887 ORTHO05D004523 3.2e-45 185.3 126 70.6
Glyma.07G068300 Glycine max HOM05D003887 ORTHO05D004523 4.1e-45 184.9 128 69.5
VMungo1383G2471 Vigna mungo HOM05D003887 ORTHO05D004523 5.4e-45 184.5 128 69.5
Lsat_1_v5_gn_6_34741 Lactuca sativa HOM05D003887 ORTHO05D004523 9.2e-45 183.7 122 71.3
SGA_v2.0_scaffold392G50674 Striga asiatica HOM05D003887 ORTHO05D004523 9.2e-45 183.7 127 72.4
Medtr7g106580 Medicago truncatula HOM05D003887 ORTHO05D004523 1.6e-44 183.0 127 68.5
Phvul.001G204200 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 2.7e-44 182.2 128 69.5
Os08g0556200 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 3.5e-44 181.8 120 75.0
CDE02G3355 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 4.6e-44 181.4 126 68.3
Lj1g0007196 Lotus japonicus HOM05D003887 ORTHO05D004523 4.6e-44 181.4 126 68.3
Lalb_Chr20g0111271 Lupinus albus HOM05D003887 ORTHO05D004523 7.8e-44 180.6 122 71.3
PSO339G2059 Papaver somniferum HOM05D003887 ORTHO05D004523 1.0e-43 180.3 130 67.7
PSO513G0097 Papaver somniferum HOM05D003887 ORTHO05D004523 5.1e-43 177.9 127 66.1
SEGI_09372 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 6.6e-43 177.6 125 67.2
VMungo1215G2564 Vigna mungo HOM05D003887 ORTHO05D004523 6.6e-43 177.6 128 68.8
Zm00001eb039720 Zea mays HOM05D003887 ORTHO05D004523 6.6e-43 177.6 119 72.3
AUR62020206 Chenopodium quinoa HOM05D003887 ORTHO05D004523 1.5e-42 176.4 127 67.7
PSO339G1162 Papaver somniferum HOM05D003887 ORTHO05D004523 1.9e-42 176.0 122 67.2
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 2.5e-42 175.6 111 76.6
Zm00001eb039830 Zea mays HOM05D003887 ORTHO05D004523 2.5e-42 175.6 118 72.0
PSO782G0206 Papaver somniferum HOM05D003887 ORTHO05D004523 5.6e-42 174.5 129 65.1
Actinidia03974 Actinidia chinensis HOM05D003887 ORTHO05D004523 9.5e-42 173.7 122 72.1
Actinidia03866 Actinidia chinensis HOM05D003887 ORTHO05D004523 2.8e-41 172.2 122 72.1
SEGI_12007 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 2.8e-41 172.2 125 65.6
Os06g0154600 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 3.6e-41 171.8 132 65.2
unitig_899.g14853 Utricularia gibba HOM05D003887 ORTHO05D004523 3.6e-41 171.8 123 64.2
arahy.Tifrunner.gnm1.ann1.Z0QHZD Arachis hypogaea HOM05D003887 ORTHO05D004523 4.7e-41 171.4 128 64.8
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 2.3e-40 169.1 124 67.7
PSO513G0196 Papaver somniferum HOM05D003887 ORTHO05D004523 2.3e-40 169.1 120 64.2
Psat5g004600 Pisum sativum HOM05D003887 ORTHO05D004523 2.3e-40 169.1 127 63.0
Glyma.16G034300 Glycine max HOM05D003887 ORTHO05D004523 4.0e-40 168.3 128 66.4
Psat3g027720 Pisum sativum HOM05D001091 ORTHO05D004523 5.2e-40 167.9 123 65.9
ATR0730G208 Amborella trichopoda HOM05D003887 ORTHO05D004523 6.8e-40 167.5 127 60.6
Ca_09068_v3 Cicer arietinum L. HOM05D003887 ORTHO05D004523 6.8e-40 167.5 127 64.6
Medtr2g088720 Medicago truncatula HOM05D003887 ORTHO05D004523 1.2e-39 166.8 127 64.6
PSO210G2693 Papaver somniferum HOM05D003887 ORTHO05D004523 2.6e-39 165.6 127 60.6
TPR.G25788 Trifolium pratense HOM05D003887 ORTHO05D004523 5.8e-39 164.5 119 65.5
ATR0730G166 Amborella trichopoda HOM05D003887 ORTHO05D004523 9.9e-39 163.7 127 61.4
AL3G23320 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 2.2e-38 162.5 123 61.8
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 2.9e-38 162.2 111 73.0
Sed0005545 Sechium edule HOM05D003887 ORTHO05D004523 2.9e-38 162.2 123 64.2
Medtr7g106600 Medicago truncatula HOM05D003887 ORTHO05D004523 3.8e-38 161.8 125 63.2
THA.LOC104826798 Tarenaya hassleriana HOM05D003887 ORTHO05D004523 6.4e-38 161.0 119 66.4
ClCG04G001280 Citrullus lanatus HOM05D003887 ORTHO05D004523 1.1e-37 160.2 121 65.3
Gohir.A04G112940 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.1e-37 160.2 109 71.6
AUR62042906 Chenopodium quinoa HOM05D003887 ORTHO05D004523 1.4e-37 159.8 117 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2540 Anthoceros agrestis HOM05D003887 ORTHO05D004523 2.4e-37 159.1 119 63.0
CDE09G0948 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 2.4e-37 159.1 112 65.2
CsaV3_4G004540 Cucumis sativus L. HOM05D003887 ORTHO05D004523 2.4e-37 159.1 121 64.5
SalBow7G3037 Salvia bowleyana HOM05D003887 ORTHO05D004523 2.4e-37 159.1 125 64.0
MELO3C019050.2 Cucumis melo HOM05D003887 ORTHO05D004523 3.2e-37 158.7 121 64.5
BcaB04g21119 Brassica carinata HOM05D003887 ORTHO05D004523 5.4e-37 157.9 126 61.1
Lj6g0023596 Lotus japonicus HOM05D003887 ORTHO05D004523 5.4e-37 157.9 122 60.7
Aa31LG3G5210 Aethionema arabicum HOM05D003887 ORTHO05D004523 2.1e-36 156.0 126 61.9
AT3G11750 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 2.7e-36 155.6 121 61.2
Thhalv10021697m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 2.7e-36 155.6 122 61.5
Carub.0003s1109 Capsella rubella HOM05D003887 ORTHO05D004523 6.0e-36 154.5 120 61.7
BcaC09g48199 Brassica carinata HOM05D003887 ORTHO05D004523 7.8e-36 154.1 124 60.5
BolC1t05293H Brassica oleracea HOM05D003887 ORTHO05D004523 7.8e-36 154.1 124 60.5
BraA01t04162Z Brassica rapa HOM05D003887 ORTHO05D004523 7.8e-36 154.1 124 60.5
Sp3g09980 Schrenkiella parvula HOM05D003887 ORTHO05D004523 7.8e-36 154.1 119 61.3
Nitab4.5_0000677g0080 Nicotiana tabacum HOM05D003887 ORTHO05D004523 1.0e-35 153.7 108 69.4
BcaB02g09713 Brassica carinata HOM05D003887 ORTHO05D004523 8.6e-35 150.6 122 61.5
BcaB06g25586 Brassica carinata HOM05D003887 ORTHO05D004523 1.1e-34 150.2 124 58.1
Thhalv10005125m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 1.5e-34 149.8 122 59.8
AT5G62980 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 1.9e-34 149.4 128 60.2
CARHR276790 Cardamine hirsuta HOM05D003887 ORTHO05D004523 2.5e-34 149.1 123 60.2
AL8G40010 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 5.6e-34 147.9 128 57.8
Glyma.19G201200 Glycine max HOM05D003887 ORTHO05D004523 5.6e-34 147.9 129 62.0
BcaC05g29334 Brassica carinata HOM05D003887 ORTHO05D004523 7.3e-34 147.5 118 58.5
C05p56150 Brassica napus HOM05D003887 ORTHO05D004523 7.3e-34 147.5 118 58.5
SMO351G0485 Selaginella moellendorffii HOM05D003887 ORTHO05D004523 7.3e-34 147.5 117 59.8
BraA05t22556Z Brassica rapa HOM05D003887 ORTHO05D004523 9.6e-34 147.1 118 59.3
Carub.0008s2369 Capsella rubella HOM05D003887 ORTHO05D004523 1.6e-33 146.4 129 55.8
Lj6g0002536 Lotus japonicus HOM05D003887 ORTHO05D004523 1.6e-33 146.4 119 58.0
Aa31LG3G5230 Aethionema arabicum HOM05D003887 ORTHO05D004523 4.7e-33 144.8 123 57.7
A05p37580 Brassica napus HOM05D003887 ORTHO05D004523 4.7e-33 144.8 118 58.5
Lj6g0002343 Lotus japonicus HOM05D003887 ORTHO05D004523 4.7e-33 144.8 122 55.7
A05p37590 Brassica napus HOM05D003887 ORTHO05D004523 6.2e-33 144.4 118 60.2
BraA05t22557Z Brassica rapa HOM05D003887 ORTHO05D004523 6.2e-33 144.4 118 60.2
Pp3c1_42850 Physcomitrium patens HOM05D003887 ORTHO05D004523 6.2e-33 144.4 116 60.3
ECA232G3477 Erigeron canadensis HOM05D003887 ORTHO05D004523 8.1e-33 144.1 107 67.3
DCAR_009071 Daucus carota HOM05D003887 ORTHO05D004523 6.9e-32 141.0 141 53.2
arahy.Tifrunner.gnm1.ann1.K0K91E Arachis hypogaea HOM05D003887 ORTHO05D004523 9.9e-31 137.1 128 54.7
AL3G35860 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 6.0e-28 127.9 119 51.3
Mapoly0109s0052 Marchantia polymorpha HOM05D003887 ORTHO05D004523 8.7e-27 124.0 116 54.3
HPP92_016697 Vanilla planifolia HOM05D003887 ORTHO05D004523 7.3e-26 120.9 79 73.4
Actinidia06188 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.2e-23 113.6 61 80.3
PGSC0003DMG400007623 Solanum tuberosum HOM05D003887 ORTHO05D004523 2.4e-21 105.9 59 79.7
Lj3A241T19 Lonicera japonica HOM05D003887 ORTHO05D004523 3.9e-19 98.6 59 84.7
CSS0033244 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 6.7e-19 97.8 65 73.8
arahy.Tifrunner.gnm1.ann1.3PGZ0K Arachis hypogaea HOM05D003887 ORTHO05D004523 1.4e-16 90.1 80 60.0
Rhsim03G0060000 Rhododendron simsii HOM05D003887 ORTHO05D004523 1.4e-16 90.1 61 70.5
Rhsim03G0060200 Rhododendron simsii HOM05D003887 ORTHO05D004523 1.4e-16 90.1 61 70.5
Cre02.g097450 Chlamydomonas reinhardtii HOM05D003887 ORTHO05D004523 1.8e-16 89.7 112 41.1
Mapoly0121s0041 Marchantia polymorpha HOM05D003887 ORTHO05D004523 3.1e-16 89.0 91 48.4
Nitab4.5_0000936g0150 Nicotiana tabacum HOM05D003887 ORTHO05D004523 3.1e-16 89.0 92 56.5
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 5.3e-16 88.2 53 71.7
Gohir.D09G062150 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.5e-15 86.7 53 75.5
arahy.Tifrunner.gnm1.ann1.T8NVRB Arachis hypogaea HOM05D003887 ORTHO05D004523 2.6e-15 85.9 63 66.7
Gorai.006G076900 Gossypium raimondii HOM05D003887 ORTHO05D004523 9.9e-15 84.0 53 73.6
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 2.2e-14 82.8 62 67.7
Mapoly0003s0213 Marchantia polymorpha HOM05D003887 ORTHO05D004523 1.2e-12 77.0 121 38.0
Actinidia37764 Actinidia chinensis HOM05D001091 ORTHO05D001020 1.6e-12 76.6 51 78.4
Aa31LG3G5240 Aethionema arabicum HOM05D003887 ORTHO05D004523 5.6e-10 68.2 68 52.9
AT3G21730 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 4.5e-07 58.5 64 46.9


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