Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C122T4 Lonicera japonica HOM05D000033 ORTHO05D001688 3.3e-50 201.4 105 100.0
Glyma.19G063800 Glycine max HOM05D000033 ORTHO05D001688 1.2e-12 76.6 53 73.6
QL01p010721 Quercus lobata HOM05D000033 ORTHO05D001688 1.2e-12 76.6 52 78.8
QL01p010796 Quercus lobata HOM05D000033 ORTHO05D001688 1.2e-12 76.6 52 78.8
vmacro10600 Vaccinium macrocarpon HOM05D000033 ORTHO05D001688 3.6e-12 75.1 49 79.6
Actinidia14922 Actinidia chinensis HOM05D000033 ORTHO05D001688 4.0e-11 71.6 50 76.0
Actinidia16684 Actinidia chinensis HOM05D000033 ORTHO05D001688 4.0e-11 71.6 45 82.2
DCAR_030180 Daucus carota HOM05D000033 ORTHO05D001688 4.0e-11 71.6 50 72.0
HPP92_027414 Vanilla planifolia HOM05D000033 ORTHO05D001688 1.2e-10 70.1 54 68.5
Peaxi162Scf00179g00529 Petunia axillaris HOM05D000033 ORTHO05D001688 1.5e-10 69.7 54 68.5
Os01g0514700 Oryza sativa ssp. japonica HOM05D000033 ORTHO05D001688 2.0e-10 69.3 75 53.3
MBI09_g25156_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D001688 2.6e-10 68.9 50 68.0
Nitab4.5_0000694g0140 Nicotiana tabacum HOM05D000033 ORTHO05D001688 4.4e-10 68.2 49 71.4
SalBow8G3770 Salvia bowleyana HOM05D000033 ORTHO05D001688 4.4e-10 68.2 48 72.9
Rhsim09G0103800 Rhododendron simsii HOM05D000033 ORTHO05D001688 5.7e-10 67.8 46 76.1
Carub.0002s1303 Capsella rubella HOM05D000033 ORTHO05D001688 1.7e-09 66.2 51 62.7
Nitab4.5_0002112g0060 Nicotiana tabacum HOM05D000033 ORTHO05D001688 4.9e-09 64.7 47 70.2
Migut.E00370 Erythranthe guttata HOM05D000033 ORTHO05D001688 6.3e-09 64.3 53 69.8
HanXRQChr14g0459161 Helianthus annuus HOM05D000033 ORTHO05D001688 1.1e-08 63.5 50 66.0
Nn3g17954 Nelumbo nucifera HOM05D000033 ORTHO05D001688 1.1e-08 63.5 45 66.7
CDE06G0469 Ceratophyllum demersum HOM05D000033 ORTHO05D001688 1.8e-08 62.8 61 54.1
ECA233G2852 Erigeron canadensis HOM05D000033 ORTHO05D001688 2.4e-08 62.4 44 68.2
Sopen05g004620 Solanum pennellii HOM05D000033 ORTHO05D001688 2.4e-08 62.4 45 71.1
Thhalv10018224m.g Eutrema salsugineum HOM05D000033 ORTHO05D001688 3.1e-08 62.0 55 56.4
MBI13_g08743_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D001688 3.1e-08 62.0 51 64.7
THA.LOC104805973 Tarenaya hassleriana HOM05D000033 ORTHO05D001688 3.1e-08 62.0 48 62.5
CDE06G0102 Ceratophyllum demersum HOM05D000033 ORTHO05D001688 1.2e-07 60.1 52 61.5
Zm00001eb132610 Zea mays HOM05D000033 ORTHO05D001688 1.2e-07 60.1 71 47.9
Lj3A880T116 Lonicera japonica HOM05D000033 ORTHO05D001688 1.6e-07 59.7 31 96.8
Cfa007891 Carpinus fangiana HOM05D000033 ORTHO05D001688 2.0e-07 59.3 49 61.2
TWI74G0841 Tripterygium wilfordii HOM05D000033 ORTHO05D001688 3.5e-07 58.5 43 65.1
SalBow8G4078 Salvia bowleyana HOM05D000033 ORTHO05D001688 4.5e-07 58.2 40 75.0
SEGI_34475 Sequoiadendron giganteum HOM05D000033 ORTHO05D001688 4.5e-07 58.2 54 57.4
Cpa.g.sc170.30 Carica papaya HOM05D000033 ORTHO05D001688 7.7e-07 57.4 60 48.3
BcaB03g15229 Brassica carinata HOM05D000033 ORTHO05D001688 1.0e-06 57.0 47 55.3
Duzib138G0320 Durio zibethinus HOM05D000033 ORTHO05D001688 1.0e-06 57.0 56 53.6
Mapoly0058s0008 Marchantia polymorpha HOM05D000033 ORTHO05D001688 1.0e-06 57.0 87 39.1
Sp5g21800 Schrenkiella parvula HOM05D000033 ORTHO05D001688 1.3e-06 56.6 48 54.2
AL2G25040 Arabidopsis lyrata HOM05D000033 ORTHO05D001688 2.3e-06 55.8 40 65.0
Manes.01G113000 Manihot esculenta HOM05D000033 ORTHO05D001688 2.3e-06 55.8 47 57.4
Aa31LG2G3300 Aethionema arabicum HOM05D000033 ORTHO05D001688 3.8e-06 55.1 47 57.4
Cfa015836 Carpinus fangiana HOM05D000033 ORTHO05D001688 6.6e-06 54.3 32 81.2
THA.LOC104809815 Tarenaya hassleriana HOM05D000033 ORTHO05D001688 8.6e-06 53.9 44 65.9
THA.LOC104815460 Tarenaya hassleriana HOM05D000033 ORTHO05D001688 8.6e-06 53.9 44 65.9


User provided reference genes

Program Settings