Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C1076G6 Lonicera japonica HOM05D003068 ORTHO05D003444 2.7e-95 352.1 188 100.0
Lj3C1074T4 Lonicera japonica HOM05D003068 ORTHO05D003444 5.5e-64 248.1 170 82.9
Cc11_g17310 Coffea canephora HOM05D003068 ORTHO05D003444 9.5e-32 141.0 156 53.8
Dinv11705 Davidia involucrata HOM05D003068 ORTHO05D003444 3.4e-29 132.5 180 50.6
CSS0019564 Camellia sinensis var. sinensis HOM05D003068 ORTHO05D003444 9.9e-29 131.0 178 50.0
Lj6A832T38 Lonicera japonica HOM05D003068 ORTHO05D003444 2.2e-28 129.8 186 50.0
Oeu011351.2 Olea europaea HOM05D003068 ORTHO05D003444 1.2e-26 124.0 145 53.8
Nitab4.5_0001771g0100 Nicotiana tabacum HOM05D003068 ORTHO05D003444 1.6e-26 123.6 166 50.6
vmacro16090 Vaccinium macrocarpon HOM05D003068 ORTHO05D003444 2.1e-26 123.2 187 46.5
CiPaw.05G106000 Carya illinoinensis HOM05D003068 ORTHO05D003444 3.9e-25 119.0 173 49.1
Nitab4.5_0004878g0010 Nicotiana tabacum HOM05D003068 ORTHO05D003444 3.9e-25 119.0 187 48.7
Actinidia09620 Actinidia chinensis HOM05D003068 ORTHO05D003444 5.1e-25 118.6 147 53.7
Actinidia39791 Actinidia chinensis HOM05D003068 ORTHO05D003444 8.6e-25 117.9 144 54.9
FvH4_4g23270 Fragaria vesca HOM05D003068 ORTHO05D003444 2.5e-24 116.3 170 48.8
FAN12G3359 Fragaria x ananassa HOM05D003068 ORTHO05D003444 1.6e-23 113.6 170 48.2
HanXRQChr08g0210011 Helianthus annuus HOM05D003068 ORTHO05D003444 4.7e-23 112.1 154 53.2
TAR629G1943 Trochodendron aralioides HOM05D003068 ORTHO05D003444 4.7e-23 112.1 160 50.6
FAN07G2860 Fragaria x ananassa HOM05D003068 ORTHO05D003444 6.2e-23 111.7 170 47.1
TAR371G1274 Trochodendron aralioides HOM05D003068 ORTHO05D003444 6.2e-23 111.7 172 50.0
Cfa009397 Carpinus fangiana HOM05D003068 ORTHO05D003444 8.1e-23 111.3 146 51.4
Hund25484 Selenicereus undatus HOM05D003068 ORTHO05D003444 1.4e-22 110.5 173 43.9
Peaxi162Scf00128g01613 Petunia axillaris HOM05D003068 ORTHO05D003444 2.4e-22 109.8 133 51.1
Atru.chr11.2377 Acer truncatum HOM05D003068 ORTHO05D003444 3.1e-22 109.4 159 49.1
FAN17G2511 Fragaria x ananassa HOM05D003068 ORTHO05D003444 3.1e-22 109.4 170 48.2
Nn4g22239 Nelumbo nucifera HOM05D003068 ORTHO05D003444 3.1e-22 109.4 159 47.8
QL03p051306 Quercus lobata HOM05D003068 ORTHO05D003444 4.0e-22 109.0 163 47.9
Nitab4.5_0002480g0020 Nicotiana tabacum HOM05D003068 ORTHO05D003444 5.2e-22 108.6 183 48.1
ECA233G3893 Erigeron canadensis HOM05D003068 ORTHO05D003444 6.9e-22 108.2 190 47.9
CAN.G75.8 Capsicum annuum HOM05D003068 ORTHO05D003444 9.0e-22 107.8 153 53.6
CiPaw.06G106100 Carya illinoinensis HOM05D003068 ORTHO05D003444 9.0e-22 107.8 142 47.9
Nitab4.5_0000039g0080 Nicotiana tabacum HOM05D003068 ORTHO05D003444 9.0e-22 107.8 183 47.0
Migut.K01012 Erythranthe guttata HOM05D003068 ORTHO05D003444 1.2e-21 107.5 122 51.6
Actinidia30621 Actinidia chinensis HOM05D003068 ORTHO05D003444 1.5e-21 107.1 173 42.2
RcHm_v2.0_Chr4g0429641 Rosa chinensis HOM05D003068 ORTHO05D003444 1.5e-21 107.1 170 47.1
PGSC0003DMG400002362 Solanum tuberosum HOM05D003068 ORTHO05D003444 5.8e-21 105.1 154 49.4
Oeu044470.1 Olea europaea HOM05D003068 ORTHO05D003444 7.6e-21 104.8 159 45.3
SalBow2G3600 Salvia bowleyana HOM05D003068 ORTHO05D003444 9.9e-21 104.4 167 40.7
PGSC0003DMG400010805 Solanum tuberosum HOM05D003068 ORTHO05D003444 9.9e-21 104.4 163 46.0
CSS0012326 Camellia sinensis var. sinensis HOM05D003068 ORTHO05D003444 1.3e-20 104.0 144 48.6
HanXRQChr12g0362261 Helianthus annuus HOM05D003068 ORTHO05D003444 1.3e-20 104.0 152 51.3
Sc14g0009170 Simmondsia chinensis HOM05D003068 ORTHO05D003444 1.7e-20 103.6 189 42.3
Oeu044469.1 Olea europaea HOM05D003068 ORTHO05D003444 3.8e-20 102.4 194 42.8
vmacro01043 Vaccinium macrocarpon HOM05D003068 ORTHO05D003444 4.9e-20 102.1 154 47.4
Prupe.1G221600 Prunus persica HOM05D003068 ORTHO05D003444 8.4e-20 101.3 182 43.4
Sopen05g012020 Solanum pennellii HOM05D003068 ORTHO05D003444 1.1e-19 100.9 170 47.6
AUR62028892 Chenopodium quinoa HOM05D003068 ORTHO05D003444 1.4e-19 100.5 181 41.4
Haze_12457 Corylus avellana HOM05D003068 ORTHO05D003444 1.4e-19 100.5 135 50.4
Rhsim12G0023100 Rhododendron simsii HOM05D003068 ORTHO05D003444 1.4e-19 100.5 157 45.9
DCAR_024651 Daucus carota HOM05D003068 ORTHO05D003444 3.2e-19 99.4 169 44.4
CANSAT01G2060 Cannabis sativa HOM05D003068 ORTHO05D003444 4.2e-19 99.0 183 41.0
Solyc05g015930.4 Solanum lycopersicum HOM05D003068 ORTHO05D003444 5.4e-19 98.6 179 45.3
CAN.G31.3 Capsicum annuum HOM05D003068 ORTHO05D003444 7.1e-19 98.2 179 46.9
Sc11g0000320 Simmondsia chinensis HOM05D003068 ORTHO05D003444 7.1e-19 98.2 158 46.8
MD16G1124000 Malus domestica HOM05D003068 ORTHO05D003444 9.3e-19 97.8 171 45.6
CANSAT01G1374 Cannabis sativa HOM05D003068 ORTHO05D003444 1.2e-18 97.4 182 41.8
Solyc05g015920.3 Solanum lycopersicum HOM05D003068 ORTHO05D003444 1.6e-18 97.1 170 46.5
Aqoxy5G03256 Aquilegia oxysepala HOM05D003068 ORTHO05D003444 2.7e-18 96.3 172 43.6
MD13G1123200 Malus domestica HOM05D003068 ORTHO05D003444 4.6e-18 95.5 166 45.8
PGR102G3269 Punica granatum HOM05D003068 ORTHO05D003444 7.8e-18 94.7 173 39.9
GSVIVG01000921001 Vitis vinifera HOM05D003068 ORTHO05D003444 1.0e-17 94.4 142 43.7
Manes.12G007400 Manihot esculenta HOM05D003068 ORTHO05D003444 1.7e-17 93.6 149 47.7
Sopen05g012000 Solanum pennellii HOM05D003068 ORTHO05D003444 1.7e-17 93.6 179 44.1
Ah.02g131010 Amaranthus hybridus HOM05D003068 ORTHO05D003444 5.1e-17 92.0 168 37.5
Rhsim12G0023200 Rhododendron simsii HOM05D003068 ORTHO05D003444 6.6e-17 91.7 142 44.4
EL10Ac6g13546 Beta vulgaris HOM05D003068 ORTHO05D003444 1.1e-16 90.9 157 42.7
MBI07_g02007_MAGBIO Magnolia biondii HOM05D003068 ORTHO05D003444 1.5e-16 90.5 170 42.9
ClCG06G001930 Citrullus lanatus HOM05D003068 ORTHO05D003444 1.9e-16 90.1 174 44.3
TAR374G0446 Trochodendron aralioides HOM05D003068 ORTHO05D003444 2.5e-16 89.7 175 44.6
Manes.13G007800 Manihot esculenta HOM05D003068 ORTHO05D003444 1.3e-15 87.4 167 41.3
TAR454G0002 Trochodendron aralioides HOM05D000127 ORTHO05D003444 1.6e-15 87.0 138 49.3
PSO478G2322 Papaver somniferum HOM05D003068 ORTHO05D003444 2.1e-15 86.7 183 43.2
Thecc.02G200100 Theobroma cacao HOM05D003068 ORTHO05D003444 6.2e-15 85.1 157 45.2
Ciclev10030493m.g Citrus clementina HOM05D003068 ORTHO05D003444 1.1e-14 84.3 157 42.0
Actinidia08047 Actinidia chinensis HOM05D003068 ORTHO05D003444 1.4e-14 84.0 170 40.0
CsaV3_6G007980 Cucumis sativus L. HOM05D003068 ORTHO05D003444 4.0e-14 82.4 172 42.4
PSO017G0558 Papaver somniferum HOM05D003068 ORTHO05D003444 4.0e-14 82.4 183 38.8
Hund06111 Selenicereus undatus HOM05D003068 ORTHO05D003444 5.3e-14 82.0 178 37.1
MELO3C022336.2 Cucumis melo HOM05D003068 ORTHO05D003444 1.5e-13 80.5 172 41.9
Potri.001G326700 Populus trichocarpa HOM05D003068 ORTHO05D003444 5.8e-13 78.6 180 36.7
AUR62005661 Chenopodium quinoa HOM05D003068 ORTHO05D003444 7.6e-13 78.2 214 35.0
unitig_749.g13315 Utricularia gibba HOM05D003068 ORTHO05D003444 1.3e-12 77.4 133 39.8
Duzib251G0076 Durio zibethinus HOM05D003068 ORTHO05D003444 1.7e-12 77.0 179 39.1
Eucgr.B03531 Eucalyptus grandis HOM05D003068 ORTHO05D003444 1.7e-12 77.0 129 41.1
Sed0000746 Sechium edule HOM05D003068 ORTHO05D003444 1.7e-12 77.0 121 47.1
Nn3g16377 Nelumbo nucifera HOM05D003068 ORTHO05D003444 2.2e-12 76.6 176 39.2
GSVIVG01033051001 Vitis vinifera HOM05D003068 ORTHO05D003444 2.2e-12 76.6 179 39.1
Aa31LG3G14530 Aethionema arabicum HOM05D003068 ORTHO05D003444 3.8e-12 75.9 193 38.3
Sed0008887 Sechium edule HOM05D003068 ORTHO05D003444 3.8e-12 75.9 151 43.7
Duzib248G1470 Durio zibethinus HOM05D003068 ORTHO05D003444 4.9e-12 75.5 177 39.5
TWI18G0019 Tripterygium wilfordii HOM05D003068 ORTHO05D003444 1.1e-11 74.3 169 39.6
Sabra16G0209200 Salix brachista HOM05D003068 ORTHO05D003444 1.4e-11 73.9 180 36.7
Potri.001G326500 Populus trichocarpa HOM05D003068 ORTHO05D003444 2.4e-11 73.2 180 34.4
SGA_v2.0_scaffold46G17427 Striga asiatica HOM05D003068 ORTHO05D003444 2.4e-11 73.2 161 39.1
Ciclev10014024m.g Citrus clementina HOM05D003068 ORTHO05D003444 5.4e-11 72.0 176 36.9
Potri.017G069220 Populus trichocarpa HOM05D003068 ORTHO05D003444 9.3e-11 71.2 180 35.0
TWI34G0873 Tripterygium wilfordii HOM05D003068 ORTHO05D003444 2.7e-10 69.7 180 37.2
TWI34G1549 Tripterygium wilfordii HOM05D003068 ORTHO05D003444 2.7e-10 69.7 180 37.2
TWI36G0350 Tripterygium wilfordii HOM05D003068 ORTHO05D003444 3.9e-09 65.9 167 38.9
Atru.chr6.2601 Acer truncatum HOM05D003068 ORTHO05D003444 6.7e-09 65.1 170 37.6
Sabra16G0209000 Salix brachista HOM05D003068 ORTHO05D003444 1.9e-08 63.5 176 34.1
Thecc.04G040800 Theobroma cacao HOM05D003068 ORTHO05D003444 1.9e-08 63.5 170 35.3
Sabra17G0058900 Salix brachista HOM05D003068 ORTHO05D003444 3.3e-08 62.8 188 34.6
Lalb_Chr21g0316891 Lupinus albus HOM05D003068 ORTHO05D003444 4.3e-08 62.4 170 32.9
MBI11_g31939_MAGBIO Magnolia biondii HOM05D003068 ORTHO05D003444 7.4e-08 61.6 157 35.7
MBI11_g38271_MAGBIO Magnolia biondii HOM05D003068 ORTHO05D003444 7.4e-08 61.6 157 35.7
Manes.04G088200 Manihot esculenta HOM05D003068 ORTHO05D003444 9.6e-08 61.2 158 36.1
Gohir.D09G038700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 1.6e-07 60.5 166 34.9
Gorai.006G044200 Gossypium raimondii HOM05D003068 ORTHO05D003444 1.6e-07 60.5 166 34.9
Duzib264G0464 Durio zibethinus HOM05D003068 ORTHO05D003444 3.7e-07 59.3 149 37.6
Gohir.A09G037700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 8.1e-07 58.2 166 31.9
Lalb_Chr06g0173741 Lupinus albus HOM05D003068 ORTHO05D003444 1.1e-06 57.8 170 34.1
Duzib147G0957 Durio zibethinus HOM05D003068 ORTHO05D003444 1.4e-06 57.4 146 34.9
Lalb_Chr02g0156781 Lupinus albus HOM05D003068 ORTHO05D003444 2.4e-06 56.6 170 34.1
arahy.Tifrunner.gnm1.ann1.51F4P8 Arachis hypogaea HOM05D003068 ORTHO05D003444 4.0e-06 55.8 175 36.0
arahy.Tifrunner.gnm1.ann1.V6C9BH Arachis hypogaea HOM05D003068 ORTHO05D003444 4.0e-06 55.8 175 36.0


User provided reference genes

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