Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 0.0e+00 1131.3 657 100.0
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 2.5e-220 769.2 582 73.4
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.7e-213 746.5 589 70.3
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.2e-211 740.3 539 73.3
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.5e-209 733.4 577 69.3
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 8.3e-208 727.6 579 69.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.6e-206 723.4 525 73.1
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 3.1e-202 709.1 539 71.2
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 8.9e-202 707.6 542 69.9
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.0e-201 706.4 540 70.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 7.1e-199 698.0 540 70.0
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.0e-197 694.1 537 70.2
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.0e-197 694.1 601 64.7
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.5e-196 690.3 561 68.4
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.6e-195 685.6 546 68.7
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.1e-194 684.1 539 69.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 4.4e-193 678.7 623 62.8
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.9e-192 675.2 546 67.9
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.1e-191 674.1 529 68.2
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.9e-191 673.3 548 66.6
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.4e-191 672.9 604 62.3
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.2e-191 672.5 537 67.0
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 2.7e-190 669.5 550 66.9
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 6.0e-190 668.3 537 66.9
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 3.9e-189 665.6 548 65.9
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 3.9e-189 665.6 548 65.9
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 4.3e-188 662.1 549 65.2
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 5.6e-188 661.8 546 66.8
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 1.3e-187 660.6 546 66.5
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.3e-187 660.6 537 66.5
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.4e-186 657.1 550 66.0
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.0e-186 655.6 535 67.1
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.5e-185 653.7 546 66.3
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.5e-185 653.7 556 64.9
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 7.6e-185 651.4 529 67.5
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.9e-184 649.4 534 65.7
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 8.4e-184 647.9 568 62.7
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 2.4e-183 646.4 530 67.0
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 7.1e-183 644.8 535 65.8
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 4.6e-182 642.1 598 61.5
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 6.0e-182 641.7 531 65.0
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.0e-181 641.0 549 65.0
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 8.7e-181 637.9 545 65.3
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.1e-180 637.5 548 64.8
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.9e-180 636.7 535 65.0
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 2.5e-180 636.3 544 64.5
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 4.3e-180 635.6 539 64.7
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 5.6e-180 635.2 538 64.9
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 5.6e-180 635.2 543 64.5
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 9.6e-180 634.4 542 64.9
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.6e-179 633.6 535 64.1
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 2.1e-179 633.3 548 64.4
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 2.8e-179 632.9 543 64.6
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.8e-179 632.9 553 63.7
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.7e-179 632.5 546 63.9
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 4.8e-179 632.1 577 61.2
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.8e-179 632.1 550 63.8
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 4.8e-179 632.1 541 63.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 6.2e-179 631.7 541 64.7
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 6.2e-179 631.7 541 64.1
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 8.1e-179 631.3 542 64.6
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-178 630.6 543 65.0
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 9.0e-178 627.9 539 65.1
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 9.0e-178 627.9 546 63.9
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.6e-177 626.3 546 64.5
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 9.9e-177 624.4 546 64.3
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 3.8e-176 622.5 542 64.0
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 6.4e-176 621.7 533 65.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.1e-175 620.9 546 63.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 7.1e-175 618.2 533 64.9
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.1e-174 616.7 546 62.8
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 6.0e-174 615.1 542 64.4
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 7.4e-172 608.2 511 67.7
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 8.2e-171 604.7 539 63.5
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-168 597.4 543 61.3
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 8.4e-168 594.7 540 60.4
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.2e-167 592.4 608 56.4
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.2e-161 574.3 543 61.0
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 2.9e-160 569.7 465 66.2
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 5.1e-157 558.9 549 58.1
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.1e-154 549.3 458 65.9
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.3e-152 544.3 549 56.1
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 4.7e-150 535.8 560 55.9
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.4e-146 523.5 457 62.4
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.6e-129 467.6 557 51.0
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.4e-122 444.5 411 62.5
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 8.0e-118 428.7 369 65.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 3.0e-117 426.8 534 46.6
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 9.5e-111 405.2 327 69.4
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.9e-109 398.7 380 61.3
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 2.6e-108 397.1 414 57.5
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.7e-107 393.3 414 58.2
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 4.6e-105 386.3 377 59.7
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.7e-104 384.4 313 64.5
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.9e-90 337.8 440 47.7
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 3.5e-89 333.6 379 51.2
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 3.2e-82 310.5 574 38.2
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 5.1e-56 223.4 225 56.9
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 3.1e-53 214.2 549 33.5
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 2.5e-50 204.5 177 62.1
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.5e-39 167.9 136 64.7
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-38 165.6 136 64.7
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 7.9e-33 146.4 117 66.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 2.6e-31 141.4 98 73.5
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.2e-28 132.5 334 29.3
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.5e-26 124.8 163 46.0
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.2e-26 124.4 97 62.9
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 4.2e-26 124.0 135 52.6
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.2e-18 97.4 56 82.1
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 9.4e-18 96.3 93 59.1
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 3.7e-14 84.3 184 34.8
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 7.7e-12 76.6 61 67.2
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 1.0e-11 76.3 65 63.1
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 6.8e-08 63.5 72 51.4
Actinidia08130 Actinidia chinensis HOM05D006816 ORTHO05D056942 6.8e-08 63.5 86 48.8
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 1.7e-06 58.9 84 46.4
Atru.chr11.2547 Acer truncatum HOM05D006816 ORTHO05D008666 2.8e-06 58.2 52 53.8


User provided reference genes

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