Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 6.9e-83 311.2 242 100.0
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 3.8e-49 199.1 240 77.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 6.3e-44 181.8 266 63.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 3.3e-37 159.5 265 59.2
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.9e-32 143.7 250 62.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 3.2e-32 142.9 122 77.0
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 6.1e-31 138.7 123 63.4
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.0e-30 137.9 262 61.5
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 4.0e-30 136.0 249 57.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 4.0e-30 136.0 249 57.0
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 5.2e-30 135.6 240 49.6
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.0e-29 133.7 113 65.5
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.3e-28 131.0 123 61.0
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.8e-28 129.8 120 72.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.7e-28 129.4 112 78.6
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.4e-27 127.5 122 72.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.0e-26 123.6 119 58.8
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 2.0e-26 123.6 124 66.9
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 2.7e-26 123.2 258 55.4
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 3.5e-26 122.9 121 58.7
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 3.8e-25 119.4 111 69.4
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 3.8e-25 119.4 257 59.5
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 3.8e-25 119.4 122 66.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 6.5e-25 118.6 114 60.5
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-24 117.9 96 68.8
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-24 117.9 96 68.8
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.1e-24 117.9 120 67.5
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.5e-24 117.5 249 49.8
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.9e-24 117.1 120 60.8
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.5e-24 116.7 108 64.8
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.2e-24 116.3 96 67.7
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.2e-24 116.3 96 67.7
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 3.2e-24 116.3 107 66.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.4e-24 114.8 114 59.6
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.6e-23 114.0 122 64.8
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.1e-23 113.6 115 59.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 2.7e-23 113.2 122 66.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 4.7e-23 112.5 122 56.6
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 6.1e-23 112.1 120 55.8
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.0e-22 111.3 122 54.1
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.8e-22 110.5 122 66.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 5.2e-22 109.0 118 55.9
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 6.8e-22 108.6 122 56.6
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.6e-21 106.7 119 53.8
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.6e-21 106.7 123 65.9
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.4e-21 106.3 106 58.5
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 3.4e-21 106.3 123 65.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.3e-20 104.4 122 64.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.3e-20 104.4 122 63.9
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.2e-20 103.6 122 63.1
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.8e-20 103.2 121 51.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 2.8e-20 103.2 122 66.4
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 3.7e-20 102.8 119 63.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.7e-20 102.8 124 64.5
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.3e-20 102.1 117 53.8
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 6.3e-20 102.1 121 65.3
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.1e-19 101.3 250 57.2
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.4e-19 100.1 96 62.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 3.1e-19 99.8 122 63.9
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 7.0e-19 98.6 122 63.9
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 7.0e-19 98.6 120 61.7
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.2e-18 97.8 120 64.2
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.2e-18 97.8 118 64.4
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.6e-18 97.4 122 63.1
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 2.0e-18 97.1 119 59.7
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.0e-18 97.1 240 48.8
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 3.5e-18 96.3 120 63.3
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 3.5e-18 96.3 122 61.5
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 4.5e-18 95.9 120 61.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 5.9e-18 95.5 120 60.8
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.3e-17 94.4 105 62.9
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.3e-17 94.4 120 62.5
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.2e-17 93.6 122 59.8
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 2.2e-17 93.6 120 62.5
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.2e-17 93.6 120 66.7
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 8.5e-17 91.7 118 61.0
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.1e-16 91.3 122 61.5
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.1e-16 91.3 196 60.7
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 1.1e-16 91.3 120 60.8
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.5e-16 90.9 120 63.3
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 1.5e-16 90.9 120 62.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 7.2e-16 88.6 80 63.8
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 9.4e-16 88.2 103 45.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.6e-15 87.4 117 60.7
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 2.1e-15 87.0 81 61.7
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 2.1e-15 87.0 75 65.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.3e-14 83.6 117 60.7
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 3.0e-14 83.2 123 55.3
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 3.0e-14 83.2 102 45.1
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 5.2e-14 82.4 79 55.7
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 6.8e-14 82.0 122 56.6
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 7.5e-13 78.6 115 58.3
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 9.8e-13 78.2 63 65.1
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 9.8e-13 78.2 76 57.9
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 9.8e-13 78.2 103 59.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 1.7e-12 77.4 121 43.8
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.7e-12 77.4 118 57.6
QL03p070946 Quercus lobata HOM05D016418 ORTHO05D018826 2.8e-12 76.6 86 69.8
CSS0004591 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 6.3e-12 75.5 43 79.1
CSS0005644 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 6.3e-12 75.5 43 79.1
CSS0041468 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 6.3e-12 75.5 43 79.1
CSS0042536 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 6.3e-12 75.5 43 79.1
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.3e-12 75.5 116 57.8
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 8.3e-12 75.1 116 57.8
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.1e-11 74.7 118 55.9
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.8e-11 73.9 116 56.9
CSS0022896 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 2.4e-11 73.6 43 76.7
CSS0000772 Camellia sinensis var. sinensis HOM05D016418 ORTHO05D018826 5.4e-11 72.4 43 74.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 9.2e-11 71.6 95 48.4
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 9.2e-11 71.6 124 44.4
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.2e-10 71.2 84 50.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 2.7e-10 70.1 99 54.5
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 2.7e-10 70.1 102 40.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 3.5e-10 69.7 103 40.8
ClCG09G022180 Citrullus lanatus HOM05D016418 ORTHO05D018826 7.7e-10 68.6 87 64.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 2.5e-08 63.5 48 68.8
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 4.3e-08 62.8 120 39.2
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 3.6e-07 59.7 105 35.2
C04p62430 Brassica napus HOM05D006591 ORTHO05D007861 3.6e-07 59.7 52 61.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 4.7e-07 59.3 102 55.9
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.0e-07 58.5 68 55.9
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 1.0e-06 58.2 97 37.1
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 5.2e-06 55.8 190 31.1


User provided reference genes

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