Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 1.0e-151 540.0 266 100.0
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 3.8e-66 255.8 266 53.8
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 3.9e-63 245.7 268 52.2
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 8.7e-63 244.6 276 53.3
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 3.3e-62 242.7 266 50.8
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 2.4e-60 236.5 267 48.3
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 9.0e-60 234.6 271 50.6
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 2.0e-59 233.4 271 51.3
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 3.4e-59 232.6 276 50.0
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.8e-55 220.3 271 47.2
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 5.6e-54 215.3 273 45.8
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 1.6e-53 213.8 267 46.8
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.8e-52 210.3 266 45.9
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 5.8e-51 205.3 263 46.0
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 7.6e-51 204.9 313 41.2
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 8.4e-50 201.4 264 44.3
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 4.2e-49 199.1 268 44.8
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 7.9e-48 194.9 263 42.6
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 3.9e-47 192.6 270 44.1
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.5e-46 190.7 296 44.9
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 1.5e-46 190.7 264 43.2
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 1.5e-46 190.7 264 43.9
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 1.9e-46 190.3 270 43.7
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 1.9e-46 190.3 270 43.0
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 5.6e-46 188.7 265 42.3
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 9.6e-46 188.0 303 39.6
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 9.6e-46 188.0 273 41.8
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 2.1e-45 186.8 201 51.2
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 3.7e-45 186.0 265 41.1
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 6.2e-45 185.3 270 44.1
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 1.8e-44 183.7 268 44.8
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 2.4e-44 183.3 307 40.4
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 2.4e-44 183.3 265 42.3
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 3.1e-44 183.0 277 44.0
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 4.0e-44 182.6 265 41.9
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 5.3e-44 182.2 314 39.2
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 9.0e-44 181.4 268 44.8
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 3.4e-43 179.5 267 41.9
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 1.7e-42 177.2 273 42.1
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 2.2e-42 176.8 265 41.5
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 4.9e-42 175.6 270 39.6
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 4.9e-42 175.6 268 40.7
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 8.4e-42 174.9 268 39.2
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 1.1e-41 174.5 282 39.0
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 1.1e-41 174.5 282 39.0
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 5.5e-41 172.2 267 39.7
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 7.1e-41 171.8 280 40.0
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 9.3e-41 171.4 270 41.1
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 6.0e-40 168.7 269 40.9
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 1.3e-39 167.5 271 41.0
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 5.1e-39 165.6 269 41.3
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 1.9e-38 163.7 254 39.8
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.5e-38 163.3 229 45.0
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.8e-37 159.8 261 36.8
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.5e-35 154.1 269 39.4
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 4.5e-35 152.5 266 36.5
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 1.3e-34 151.0 289 37.4
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 1.3e-34 151.0 268 37.7
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.7e-34 150.6 286 35.3
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 2.9e-34 149.8 282 36.2
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 3.8e-34 149.4 289 36.7
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 8.5e-34 148.3 281 35.6
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 8.5e-34 148.3 298 34.6
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 8.5e-34 148.3 272 34.9
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 7.2e-33 145.2 216 42.1
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 9.3e-33 144.8 272 37.1
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 1.2e-32 144.4 306 34.3
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 3.6e-32 142.9 263 36.5
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 6.1e-32 142.1 271 34.3
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.4e-31 141.0 287 34.1
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 2.3e-31 140.2 305 35.1
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 2.3e-31 140.2 281 38.1
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 3.0e-31 139.8 291 35.7
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 3.9e-31 139.4 237 40.5
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 5.1e-31 139.0 303 33.3
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 8.8e-31 138.3 306 34.3
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 1.1e-30 137.9 287 35.5
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 2.5e-30 136.7 287 36.2
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 3.3e-30 136.3 269 34.9
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 7.4e-30 135.2 265 33.2
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 2.8e-29 133.3 304 32.9
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 4.8e-29 132.5 194 43.3
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 8.2e-29 131.7 291 33.3
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 6.9e-28 128.6 261 37.2
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 1.5e-27 127.5 272 34.2
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 2.0e-27 127.1 290 33.1
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 4.5e-27 125.9 283 32.5
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 2.2e-26 123.6 306 32.0
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 3.8e-26 122.9 297 31.6
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 6.5e-26 122.1 275 34.2
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 7.9e-24 115.2 268 32.1
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 5.1e-23 112.5 210 35.7
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 1.8e-20 104.0 236 35.2
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 2.4e-20 103.6 127 51.2
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 2.0e-19 100.5 107 47.7
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 6.5e-18 95.5 307 26.7
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.2e-16 91.3 150 43.3
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 2.1e-16 90.5 239 30.5
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 4.7e-16 89.4 195 33.3
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 3.3e-14 83.2 136 38.2
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 1.8e-12 77.4 145 36.6
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.4e-12 77.0 139 36.0
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 6.5e-10 68.9 86 43.0
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 1.6e-08 64.3 243 27.6
Lj2g0002550 Lotus japonicus HOM05D007438 ORTHO05D009395 2.7e-08 63.5 59 52.5


User provided reference genes

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