Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.9e-136 487.6 265 100.0
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.8e-122 442.2 265 87.2
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 86.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.6e-120 435.6 265 86.4
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.3e-119 433.3 265 86.8
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.8e-119 431.8 265 86.4
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.1e-118 430.3 265 85.3
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 1.9e-118 429.5 265 85.7
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.9e-118 429.5 264 86.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 84.9
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.5
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 84.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 84.9
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 9.4e-118 427.2 263 85.2
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 84.5
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.7e-117 425.6 264 84.8
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 3.6e-117 425.2 264 83.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 6.1e-117 424.5 265 85.3
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 84.5
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 84.2
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 2.3e-116 422.5 265 83.8
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.3e-116 422.5 265 83.8
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 5.2e-116 421.4 264 82.6
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 82.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.7e-116 421.0 265 82.6
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.8e-116 420.6 265 83.0
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.1e-115 420.2 265 83.0
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.1e-115 420.2 265 83.8
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 83.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.0e-115 419.5 262 82.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.0e-115 419.5 264 82.6
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.3e-115 418.7 264 81.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.4e-115 418.3 265 82.3
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.4e-115 418.3 261 83.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 5.7e-115 417.9 265 82.6
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 7.4e-115 417.5 264 81.8
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 7.4e-115 417.5 265 82.6
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 7.4e-115 417.5 265 82.6
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 7.4e-115 417.5 265 84.5
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.3e-114 416.8 265 82.6
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.3e-114 416.8 265 84.5
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.3e-114 416.8 265 82.3
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.7e-114 416.4 265 81.5
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.7e-114 416.4 265 81.5
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.2e-114 416.0 265 82.6
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.2e-114 416.0 265 82.3
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.7e-114 415.2 259 84.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.1e-113 413.7 263 82.9
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.1e-113 413.7 278 80.6
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.1e-113 413.7 262 82.4
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 4.1e-113 411.8 260 82.3
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 4.1e-113 411.8 260 82.3
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.1e-113 411.8 263 81.7
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 4.1e-113 411.8 265 81.5
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 5.3e-113 411.4 260 82.3
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 9.1e-113 410.6 262 80.9
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 9.1e-113 410.6 263 82.5
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 9.1e-113 410.6 262 82.1
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 9.1e-113 410.6 263 81.4
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 9.1e-113 410.6 262 80.5
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 81.9
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.2e-112 410.2 260 81.9
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-112 410.2 262 80.9
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 80.5
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 3.5e-112 408.7 263 81.4
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.5e-112 408.7 262 81.3
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 4.5e-112 408.3 260 81.2
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 4.5e-112 408.3 260 81.2
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 4.5e-112 408.3 263 81.4
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 5.9e-112 407.9 265 80.8
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 5.9e-112 407.9 263 81.0
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 5.9e-112 407.9 263 82.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.7e-112 407.5 265 80.0
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 7.7e-112 407.5 263 81.4
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.3e-111 406.8 265 81.9
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 1.7e-111 406.4 265 81.9
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.8e-111 405.2 255 83.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 8.5e-111 404.1 263 79.8
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.5e-110 403.3 262 80.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.5e-110 403.3 262 80.5
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 3.2e-110 402.1 254 83.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 4.2e-110 401.7 253 84.2
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 9.4e-110 400.6 263 80.2
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.1e-109 399.4 269 78.8
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 3.6e-109 398.7 264 81.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 4.7e-109 398.3 265 79.6
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 4.7e-109 398.3 262 77.9
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.0e-108 397.1 287 77.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 2.3e-108 396.0 259 81.1
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 4.0e-108 395.2 251 82.1
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 4.0e-108 395.2 261 79.7
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.2e-107 393.7 259 80.7
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.0e-107 392.9 253 80.2
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.0e-107 392.9 253 83.0
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 2.6e-107 392.5 262 78.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 2.6e-107 392.5 261 78.9
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.3e-107 392.1 241 86.3
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 5.7e-107 391.3 286 76.2
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.8e-105 386.3 264 74.6
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 9.1e-105 384.0 261 76.6
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.7e-103 379.8 258 77.5
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.2e-103 379.4 225 88.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.5e-102 375.9 265 76.6
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.2e-102 375.6 257 75.9
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.7e-101 372.5 225 86.7
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.8e-100 369.8 262 73.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 4.0e-100 368.6 238 81.1
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.6e-99 365.9 262 73.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 2.8e-98 362.5 258 71.7
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.1e-97 359.0 265 74.7
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 4.1e-97 358.6 256 71.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.9e-92 340.9 257 68.1
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 3.4e-91 339.0 265 72.1
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.3e-90 334.3 258 68.6
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.1e-85 319.7 187 88.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.2e-82 309.7 252 65.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-69 266.5 255 54.1
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.9e-65 253.4 265 58.5
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.1e-65 252.3 177 72.3
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.7e-63 246.9 152 84.9
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.6e-61 240.4 161 80.1
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-57 227.6 154 79.2
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 9.0e-52 208.0 241 44.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.3e-50 204.1 265 50.2
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.8e-45 185.7 253 41.1
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.4e-42 175.3 234 41.9
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.8e-35 152.1 240 37.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.1e-33 147.9 98 75.5
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.0e-31 139.8 77 93.5
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.9e-31 139.4 96 76.0
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-28 131.3 75 89.3
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.5e-27 127.5 119 59.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.4e-25 120.9 241 36.5
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 3.3e-22 109.8 101 64.4
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 5.9e-11 72.4 75 60.0


User provided reference genes

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