Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 8.8e-139 496.9 242 100.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 3.4e-98 362.1 258 71.3
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 3.4e-98 362.1 251 71.7
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 4.1e-96 355.1 250 71.2
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 6.0e-95 351.3 252 71.4
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.5e-93 346.7 245 71.0
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 5.6e-93 344.7 245 71.4
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 7.3e-93 344.4 248 69.4
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 9.6e-93 344.0 241 71.4
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 9.6e-93 344.0 254 67.3
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.6e-92 343.2 249 69.5
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.1e-92 342.8 247 69.6
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.8e-92 342.4 241 71.8
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 4.7e-92 341.7 256 67.2
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.2e-92 341.3 251 68.9
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 8.1e-92 340.9 256 66.0
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.1e-91 340.5 251 67.3
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.4e-91 340.1 246 68.3
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 1.8e-91 339.7 248 69.8
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 3.1e-91 339.0 249 67.9
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 4.0e-91 338.6 247 70.4
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 5.2e-91 338.2 239 69.0
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 8.9e-91 337.4 247 67.2
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 1.2e-90 337.0 256 67.2
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.5e-90 336.7 250 67.6
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.4e-90 335.5 251 66.5
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 7.6e-90 334.3 247 68.4
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 6.4e-89 331.3 233 70.0
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.1e-88 330.5 248 68.5
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.4e-88 330.1 231 72.7
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.2e-88 328.9 242 68.2
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 5.4e-88 328.2 257 65.8
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 5.4e-88 328.2 251 67.3
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 7.1e-88 327.8 252 66.7
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.2e-87 327.0 244 68.0
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.2e-87 327.0 242 68.6
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 2.7e-87 325.9 258 64.0
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.5e-87 325.5 244 68.4
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 6.0e-87 324.7 282 59.2
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 7.8e-87 324.3 240 69.2
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 3.9e-86 322.0 249 67.1
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 3.9e-86 322.0 245 67.3
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 8.7e-86 320.9 242 68.2
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.5e-85 320.1 245 66.9
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 2.5e-85 319.3 241 69.3
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 7.3e-85 317.8 248 66.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 9.6e-85 317.4 241 66.8
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 9.6e-85 317.4 245 65.7
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.3e-84 317.0 255 62.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 3.6e-84 315.5 242 65.7
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 3.6e-84 315.5 246 64.2
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.8e-84 315.1 256 64.8
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 6.2e-84 314.7 251 62.9
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 8.1e-84 314.3 243 64.6
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 8.1e-84 314.3 250 63.6
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.1e-83 313.9 311 55.3
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.1e-83 313.9 260 63.1
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 1.4e-83 313.5 305 55.7
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 1.8e-83 313.2 247 65.2
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.4e-83 312.8 247 64.8
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.4e-83 312.8 240 67.5
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 5.3e-83 311.6 247 64.8
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 5.3e-83 311.6 247 64.4
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 5.3e-83 311.6 245 64.9
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 5.3e-83 311.6 248 64.9
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.5e-82 310.1 241 65.6
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 2.6e-82 309.3 246 62.2
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.3e-81 307.0 257 59.1
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 3.8e-81 305.4 249 63.1
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 6.4e-81 304.7 244 63.1
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 2.4e-80 302.8 245 62.4
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.4e-80 302.8 241 63.5
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 2.4e-80 302.8 242 62.8
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 3.2e-80 302.4 247 62.8
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 3.5e-79 298.9 250 63.2
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.3e-78 297.0 239 66.9
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.9e-77 293.1 232 63.8
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.5e-77 292.7 205 69.8
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 8.4e-73 277.7 253 58.5
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 2.3e-70 269.6 233 61.8
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.6e-68 263.5 187 69.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 6.2e-68 261.5 249 56.2
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.8e-67 260.0 281 49.8
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.2e-66 257.3 180 71.1
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.6e-66 256.1 182 72.5
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 3.4e-66 255.8 259 56.4
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 2.2e-65 253.1 250 52.8
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 1.4e-64 250.4 194 68.0
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.9e-64 250.0 248 55.2
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 6.7e-62 241.5 275 48.4
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 4.3e-61 238.8 186 65.6
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.4e-59 233.8 206 56.3
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.8e-59 233.4 239 52.3
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.1e-59 232.6 283 45.9
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 2.0e-58 229.9 271 49.8
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 5.0e-57 225.3 213 54.9
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 6.3e-52 208.4 317 43.5
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.7e-44 183.7 136 67.6
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.4e-40 170.6 116 69.0
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.4e-38 164.1 138 61.6
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 7.4e-37 158.3 191 48.2
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 3.0e-30 136.3 90 75.6
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 3.5e-26 122.9 89 68.5
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 5.5e-24 115.5 88 62.5
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 1.4e-11 74.3 39 76.9


User provided reference genes

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