Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 5.3e-179 630.9 326 100.0
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 4.1e-91 339.0 329 60.2
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.8e-87 326.2 326 57.1
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 9.2e-83 311.2 358 53.6
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 5.1e-81 305.4 329 55.3
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 6.6e-81 305.1 333 56.5
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 1.5e-80 303.9 338 55.0
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 5.6e-80 302.0 326 56.7
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.2e-79 300.8 332 54.2
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.8e-79 299.7 330 54.8
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 4.7e-79 298.9 365 50.7
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.4e-78 296.6 347 54.8
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 4.0e-78 295.8 333 54.7
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 5.2e-78 295.4 317 54.6
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 5.2e-78 295.4 323 56.0
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.2e-77 294.3 322 54.3
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 9.9e-77 291.2 339 54.9
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 9.9e-77 291.2 332 53.9
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 2.9e-76 289.7 331 53.2
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 2.9e-76 289.7 326 54.0
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 4.9e-76 288.9 344 53.5
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 4.9e-76 288.9 326 53.4
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 1.1e-75 287.7 343 53.1
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.2e-75 286.2 333 52.9
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 4.2e-75 285.8 326 52.5
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 4.2e-75 285.8 326 52.5
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 2.7e-74 283.1 322 52.8
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 3.5e-74 282.7 333 51.7
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 4.6e-74 282.3 327 51.7
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 6.0e-74 282.0 329 53.5
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 2.3e-73 280.0 326 52.5
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 3.0e-73 279.6 327 50.2
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 3.0e-73 279.6 326 52.1
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.9e-73 279.3 345 51.3
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.9e-73 279.3 345 51.3
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 5.1e-73 278.9 330 50.6
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.6e-73 278.5 349 51.3
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 8.7e-73 278.1 348 51.1
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.5e-72 277.3 330 50.0
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 1.5e-72 277.3 326 51.5
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 1.9e-72 276.9 346 51.2
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.9e-72 276.9 326 53.1
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 2.5e-72 276.6 330 50.0
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 2.5e-72 276.6 330 51.2
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 4.3e-72 275.8 329 50.8
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 5.6e-72 275.4 326 50.9
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 2.1e-71 273.5 327 52.0
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 2.8e-71 273.1 341 50.7
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 2.8e-71 273.1 322 52.2
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 3.6e-71 272.7 334 50.6
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 3.6e-71 272.7 327 51.7
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 4.8e-71 272.3 327 52.0
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 8.1e-71 271.6 329 50.2
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 1.8e-70 270.4 329 50.5
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.8e-70 270.4 332 51.2
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 2.4e-70 270.0 479 42.2
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 3.1e-70 269.6 329 50.5
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 5.3e-70 268.9 327 52.3
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.2e-69 267.7 333 52.0
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 2.0e-69 266.9 329 49.8
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 2.0e-69 266.9 328 50.6
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 3.4e-69 266.2 327 49.8
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 4.5e-69 265.8 333 48.0
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 1.3e-68 264.2 328 50.6
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 2.2e-68 263.5 326 50.3
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 3.8e-68 262.7 327 49.8
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 3.2e-67 259.6 326 48.5
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 7.1e-67 258.5 326 48.5
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 7.1e-67 258.5 330 49.4
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 9.3e-67 258.1 326 50.0
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.2e-66 257.7 510 39.6
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 1.6e-66 257.3 332 49.4
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 1.6e-66 257.3 328 49.4
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 1.0e-65 254.6 327 51.1
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 1.8e-65 253.8 326 49.7
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 5.1e-65 252.3 340 47.9
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 1.1e-64 251.1 277 53.8
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 1.5e-64 250.8 330 48.5
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.6e-63 247.3 330 49.7
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 2.1e-63 246.9 326 48.8
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 6.2e-63 245.4 324 46.6
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 8.1e-63 245.0 335 47.5
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 8.1e-63 245.0 322 49.4
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 1.4e-62 244.2 323 46.7
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 3.4e-61 239.6 323 46.7
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 9.9e-61 238.0 323 46.4
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.2e-60 236.9 317 47.6
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 2.2e-60 236.9 326 45.7
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 2.9e-60 236.5 323 46.1
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 3.8e-60 236.1 323 46.4
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 7.1e-59 231.9 322 45.7
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 1.6e-58 230.7 322 46.3
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 3.5e-58 229.6 226 61.5
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 6.0e-58 228.8 333 45.9
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.0e-57 228.0 327 46.8
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-57 228.0 325 44.6
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-57 228.0 323 45.2
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 1.0e-57 228.0 323 45.2
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.3e-57 227.6 331 47.4
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.3e-57 227.6 326 46.3
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 8.7e-57 224.9 323 44.3
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.5e-56 224.2 326 45.7
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 7.4e-56 221.9 331 46.2
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 7.4e-56 221.9 289 46.4
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 4.8e-55 219.2 323 43.7
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 9.0e-54 214.9 324 43.8
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.6e-53 213.4 326 44.2
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 1.7e-52 210.7 326 41.7
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 1.7e-52 210.7 327 42.5
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 3.2e-51 206.5 326 42.0
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 7.1e-51 205.3 323 43.3
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 7.1e-51 205.3 323 43.3
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 7.1e-51 205.3 323 43.3
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.3e-49 201.1 324 42.3
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 1.3e-49 201.1 322 41.9
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 8.7e-49 198.4 323 42.7
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 3.3e-48 196.4 323 42.4
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 9.7e-48 194.9 318 44.7
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 3.1e-46 189.9 338 40.8
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 8.5e-44 181.8 176 59.7
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.4e-43 181.0 223 49.3
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 1.1e-40 171.4 326 40.8
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 4.3e-40 169.5 326 40.8
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 2.2e-39 167.2 177 52.5
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.2e-37 161.4 198 50.0
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 5.9e-37 159.1 328 38.1
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 6.5e-36 155.6 340 37.9
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 6.5e-36 155.6 315 39.4
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 7.9e-34 148.7 175 48.6
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 6.7e-33 145.6 271 39.5
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.8e-30 137.5 165 52.1
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 1.8e-30 137.5 111 65.8
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 4.7e-26 122.9 175 44.6
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 5.2e-25 119.4 332 32.8
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 7.4e-24 115.5 107 61.7
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 4.1e-22 109.8 313 32.3
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 4.5e-21 106.3 327 31.2
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 1.7e-20 104.4 332 31.9
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 2.9e-20 103.6 151 41.1
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 9.4e-19 98.6 323 27.9
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 1.6e-18 97.8 127 49.6
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.2e-16 91.7 312 30.4
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 3.8e-12 76.6 79 57.0
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 3.8e-12 76.6 79 57.0
Sabra12G0063200 Salix brachista HOM05D004891 ORTHO05D005997 3.6e-10 70.1 79 55.7
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 1.8e-09 67.8 329 25.8
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.0e-09 67.0 194 29.9
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.5e-08 64.7 194 31.4
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 2.8e-07 60.5 109 41.3
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.1e-06 58.5 199 29.6
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 4.1e-06 56.6 196 28.1
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 5.4e-06 56.2 193 29.0
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 5.4e-06 56.2 204 27.9
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.1e-06 55.5 234 26.1


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