Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A909G46 Lonicera japonica HOM05D000143 ORTHO05D000072 9.7e-47 189.9 102 100.0
Rhsim03G0199300 Rhododendron simsii HOM05D000143 ORTHO05D000072 3.4e-15 85.1 77 53.2
Sabra12G0020900 Salix brachista HOM05D000143 ORTHO05D000072 4.4e-15 84.7 94 50.0
SEGI_26405 Sequoiadendron giganteum HOM05D000143 ORTHO05D000072 2.2e-14 82.4 84 45.2
Rhsim03G0199400 Rhododendron simsii HOM05D000143 ORTHO05D000072 1.2e-12 76.6 77 46.8
Hund04835 Selenicereus undatus HOM05D000143 ORTHO05D000072 6.0e-12 74.3 82 45.1
ClCG01G000580 Citrullus lanatus HOM05D000143 ORTHO05D000072 1.0e-11 73.6 79 44.3
PSO063G4018 Papaver somniferum HOM05D000143 ORTHO05D000072 5.0e-11 71.2 84 40.5
Dinv28332 Davidia involucrata HOM05D000143 ORTHO05D000072 5.6e-10 67.8 134 33.6
C09p42980 Brassica napus HOM05D000143 ORTHO05D000072 7.3e-10 67.4 85 40.0
Cc02_g01840 Coffea canephora HOM05D000143 ORTHO05D000072 2.8e-09 65.5 122 36.1
TAR375G0683 Trochodendron aralioides HOM05D000143 ORTHO05D000072 3.6e-09 65.1 115 35.7
Eucgr.A01497 Eucalyptus grandis HOM05D000143 ORTHO05D000072 6.2e-09 64.3 116 34.5
Lj3C910T7 Lonicera japonica HOM05D000143 ORTHO05D000072 8.0e-09 63.9 122 34.4
Aqoxy7G00137 Aquilegia oxysepala HOM05D000143 ORTHO05D000072 1.1e-08 63.5 117 32.5
Potri.012G031400 Populus trichocarpa HOM05D000143 ORTHO05D000072 1.1e-08 63.5 129 34.9
TWI39G1243 Tripterygium wilfordii HOM05D000143 ORTHO05D000072 1.1e-08 63.5 135 32.6
BcaB08g35681 Brassica carinata HOM05D000143 ORTHO05D000072 1.8e-08 62.8 77 39.0
Migut.F00240 Erythranthe guttata HOM05D000143 ORTHO05D000072 1.8e-08 62.8 138 31.9
PGSC0003DMG400024493 Solanum tuberosum HOM05D000143 ORTHO05D000072 1.8e-08 62.8 83 34.9
Thecc.03G193500 Theobroma cacao HOM05D000143 ORTHO05D000072 2.3e-08 62.4 134 32.1
unitig_37.g12546 Utricularia gibba HOM05D000143 ORTHO05D000072 2.3e-08 62.4 124 33.9
Duzib068G0039 Durio zibethinus HOM05D000143 ORTHO05D000072 5.2e-08 61.2 134 30.6
MBI07_g26936_MAGBIO Magnolia biondii HOM05D000143 ORTHO05D000072 5.2e-08 61.2 131 32.1
Actinidia08629 Actinidia chinensis HOM05D000143 ORTHO05D000072 6.8e-08 60.8 117 33.3
Cpa.g.sc3.56 Carica papaya HOM05D000143 ORTHO05D000072 6.8e-08 60.8 131 32.1
Potri.015G021900 Populus trichocarpa HOM05D000143 ORTHO05D000072 6.8e-08 60.8 134 32.1
Rhsim03G0199700 Rhododendron simsii HOM05D000143 ORTHO05D000072 6.8e-08 60.8 77 39.0
CiPaw.06G007900 Carya illinoinensis HOM05D000143 ORTHO05D000072 8.9e-08 60.5 135 31.1
Oeu037108.1 Olea europaea HOM05D000143 ORTHO05D000072 8.9e-08 60.5 116 33.6
Sed0025367 Sechium edule HOM05D000143 ORTHO05D000072 2.0e-07 59.3 118 33.9
PGR042G3598 Punica granatum HOM05D000143 ORTHO05D000072 2.6e-07 58.9 115 33.9
GSVIVG01028713001 Vitis vinifera HOM05D000143 ORTHO05D000072 2.6e-07 58.9 116 32.8
Gorai.006G180800 Gossypium raimondii HOM05D000143 ORTHO05D000072 3.4e-07 58.5 67 44.8
Lj1A1013T38 Lonicera japonica HOM05D000143 ORTHO05D000072 3.4e-07 58.5 117 31.6
Ciclev10007057m.g Citrus clementina HOM05D000143 ORTHO05D000072 4.4e-07 58.2 115 33.9
DCAR_010622 Daucus carota HOM05D000143 ORTHO05D000072 5.8e-07 57.8 117 34.2
Gorai.008G270400 Gossypium raimondii HOM05D000143 ORTHO05D000072 5.8e-07 57.8 135 30.4
CiPaw.05G257500 Carya illinoinensis HOM05D000143 ORTHO05D000072 7.5e-07 57.4 128 30.5
Manes.14G018300 Manihot esculenta HOM05D000143 ORTHO05D000072 7.5e-07 57.4 116 29.3
Nn1g01831 Nelumbo nucifera HOM05D000143 ORTHO05D000072 7.5e-07 57.4 118 31.4
Nitab4.5_0002589g0090 Nicotiana tabacum HOM05D000143 ORTHO05D000072 7.5e-07 57.4 135 31.1
Cc01_g05850 Coffea canephora HOM05D000143 ORTHO05D000072 9.8e-07 57.0 135 32.6
Duzib084G0985 Durio zibethinus HOM05D000143 ORTHO05D000072 9.8e-07 57.0 115 33.0
FAN01G1104 Fragaria x ananassa HOM05D000143 ORTHO05D000072 9.8e-07 57.0 116 30.2
Peaxi162Scf00904g00131 Petunia axillaris HOM05D000143 ORTHO05D000072 9.8e-07 57.0 123 31.7
SEGI_34942 Sequoiadendron giganteum HOM05D000143 ORTHO05D000072 9.8e-07 57.0 123 29.3
Cfa016366 Carpinus fangiana HOM05D000143 ORTHO05D000072 1.3e-06 56.6 134 32.1
FAN10G0394 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.3e-06 56.6 116 31.0
FAN10G0411 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.3e-06 56.6 116 31.0
vmacro06571 Vaccinium macrocarpon HOM05D000143 ORTHO05D000072 1.3e-06 56.6 135 30.4
FAN03G2273 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.7e-06 56.2 116 31.0
Actinidia29512 Actinidia chinensis HOM05D000143 ORTHO05D000072 2.2e-06 55.8 77 39.0
Aa31LG3G9290 Aethionema arabicum HOM05D000143 ORTHO05D000072 2.2e-06 55.8 119 31.9
MELO3C005869.2 Cucumis melo HOM05D000143 ORTHO05D000072 2.2e-06 55.8 119 31.1
Gohir.A12G251500 Gossypium hirsutum HOM05D000143 ORTHO05D000072 2.2e-06 55.8 143 28.7
MBI06_g38099_MAGBIO Magnolia biondii HOM05D000143 ORTHO05D000072 2.2e-06 55.8 118 30.5
Nitab4.5_0015933g0010 Nicotiana tabacum HOM05D000143 ORTHO05D000072 2.2e-06 55.8 123 32.5
vmacro06568 Vaccinium macrocarpon HOM05D000143 ORTHO05D000072 2.2e-06 55.8 117 32.5
Haze_00116 Corylus avellana HOM05D000143 ORTHO05D000072 2.9e-06 55.5 134 31.3
CsaV3_5G000680 Cucumis sativus L. HOM05D000143 ORTHO05D000072 2.9e-06 55.5 119 31.1
Atru.chr1.257 Acer truncatum HOM05D000143 ORTHO05D000072 3.7e-06 55.1 129 29.5
Gohir.D09G159100 Gossypium hirsutum HOM05D000143 ORTHO05D000072 3.7e-06 55.1 112 32.1
CSS0003069 Camellia sinensis var. sinensis HOM05D000143 ORTHO05D000072 4.9e-06 54.7 54 55.6
FAN06G3086 Fragaria x ananassa HOM05D000143 ORTHO05D000072 4.9e-06 54.7 115 30.4
Hma1.2p1_0487F.1_g163600 Hydrangea macrophylla HOM05D000143 ORTHO05D000072 6.4e-06 54.3 125 28.8
MD01G1215700 Malus domestica HOM05D000143 ORTHO05D000072 6.4e-06 54.3 116 29.3
CDE09G0804 Ceratophyllum demersum HOM05D000143 ORTHO05D000072 8.3e-06 53.9 131 26.7
FAN06G4284 Fragaria x ananassa HOM05D000143 ORTHO05D000072 8.3e-06 53.9 115 31.3
Gohir.A11G298000 Gossypium hirsutum HOM05D000143 ORTHO05D000072 8.3e-06 53.9 143 28.0
SalBow4G2561 Salvia bowleyana HOM05D000143 ORTHO05D000072 8.3e-06 53.9 136 27.9
Sc19g0001150 Simmondsia chinensis HOM05D000143 ORTHO05D000072 8.3e-06 53.9 126 31.0


User provided reference genes

Program Settings