Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 7.5e-144 513.8 261 100.0
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 7.9e-109 397.5 255 78.0
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 3.9e-108 395.2 253 79.1
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 5.1e-108 394.8 257 77.0
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 1.1e-107 393.7 247 81.4
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 1.5e-107 393.3 254 79.9
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 7.3e-107 391.0 258 76.4
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.3e-106 390.2 260 77.3
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.6e-106 389.8 260 77.3
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.1e-106 389.4 257 77.0
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 2.8e-106 389.0 254 78.7
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 6.2e-106 387.9 273 74.0
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.1e-106 387.5 258 76.0
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.1e-105 387.1 256 77.7
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.8e-105 386.3 251 78.1
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 4.0e-105 385.2 260 76.9
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 6.9e-105 384.4 258 79.5
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 1.5e-104 383.3 255 78.8
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 1.5e-104 383.3 263 76.8
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 2.0e-104 382.9 256 75.8
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.0e-104 382.9 254 77.2
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 2.6e-104 382.5 253 78.3
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 2.6e-104 382.5 255 76.9
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 3.4e-104 382.1 257 75.5
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 3.4e-104 382.1 253 77.1
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 4.5e-104 381.7 257 75.5
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.5e-104 381.7 255 78.0
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 9.9e-104 380.6 257 75.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.7e-103 379.8 253 77.1
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 4.9e-103 378.3 253 75.5
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.1e-102 377.1 257 76.7
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 1.9e-102 376.3 260 72.3
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 1.9e-102 376.3 276 72.1
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 2.4e-102 375.9 260 73.8
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 3.2e-102 375.6 251 76.5
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 4.2e-102 375.2 252 77.0
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 7.1e-102 374.4 253 75.9
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.2e-101 373.6 261 72.8
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.1e-101 372.9 260 73.5
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 2.7e-101 372.5 253 75.1
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.0e-100 370.5 257 72.4
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.0e-100 370.5 257 72.4
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.3e-100 370.2 250 75.6
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.8e-100 369.8 257 74.3
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 5.1e-100 368.2 256 74.2
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 5.1e-100 368.2 256 74.2
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 5.1e-100 368.2 256 73.8
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 5.1e-100 368.2 256 74.2
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 5.1e-100 368.2 254 75.6
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 6.7e-100 367.9 254 76.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 6.7e-100 367.9 243 76.5
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 8.7e-100 367.5 256 74.2
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 1.5e-99 366.7 252 72.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 2.5e-99 365.9 251 74.1
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 2.5e-99 365.9 192 99.5
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 5.6e-99 364.8 255 72.9
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 5.6e-99 364.8 257 73.2
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 7.4e-99 364.4 259 72.2
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.3e-98 363.6 250 74.0
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 2.1e-98 362.8 265 72.1
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 2.1e-98 362.8 253 73.5
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 2.8e-98 362.5 249 74.7
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 4.8e-98 361.7 260 71.2
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 4.8e-98 361.7 251 72.1
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 6.2e-98 361.3 260 71.2
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 8.1e-98 360.9 252 73.8
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.4e-97 360.1 261 70.5
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.8e-97 359.8 260 70.8
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 3.1e-97 359.0 258 70.5
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.9e-97 357.8 248 73.8
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 6.9e-97 357.8 255 72.2
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 1.5e-96 356.7 282 65.6
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 2.6e-96 355.9 252 72.6
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 3.4e-96 355.5 263 69.2
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 4.5e-96 355.1 248 73.4
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 5.8e-96 354.8 256 71.1
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 1.3e-95 353.6 227 75.3
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.2e-95 352.8 291 65.3
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 6.5e-95 351.3 273 68.5
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 6.5e-95 351.3 249 73.9
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 7.1e-94 347.8 259 68.7
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.2e-93 347.1 253 69.6
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 7.9e-93 344.4 249 73.5
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.7e-92 341.3 256 71.1
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 3.3e-91 339.0 231 72.7
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.5e-88 330.1 289 63.3
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 2.6e-88 329.3 253 66.8
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.0e-87 327.4 253 66.8
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 1.1e-86 323.9 256 68.0
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.5e-85 318.9 319 57.1
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 6.3e-82 308.1 223 66.4
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 5.3e-81 305.1 237 64.6
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 4.5e-80 302.0 228 67.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 2.4e-73 279.6 490 39.6
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.8e-65 253.4 244 54.5
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 4.5e-64 248.8 185 71.9
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.9e-62 243.4 167 74.3
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 5.7e-59 231.9 141 83.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 3.1e-57 226.1 159 71.1
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.2e-53 214.2 156 69.9
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 2.7e-53 213.0 164 69.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.4e-49 200.7 170 64.7
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 2.9e-34 149.8 220 37.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.6e-29 134.0 192 48.4
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 3.4e-27 126.3 81 71.6
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 1.4e-25 120.9 97 69.1
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 1.4e-25 120.9 101 62.4
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 3.2e-25 119.8 100 63.0
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 1.0e-23 114.8 92 66.3
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 5.6e-22 109.0 115 55.7
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 2.8e-13 80.1 67 64.2
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 5.2e-12 75.9 111 35.1


User provided reference genes

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