Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 1.1e-190 669.8 350 100.0
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 3.4e-91 339.3 347 53.0
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.6e-88 330.5 346 49.1
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.8e-85 319.7 346 48.0
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 4.8e-85 318.9 347 46.4
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 1.4e-84 317.4 347 47.3
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.5e-83 313.9 347 47.0
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 2.2e-82 310.1 346 46.5
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.1e-81 307.8 346 46.2
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 7.4e-78 295.0 341 44.9
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 9.6e-78 294.7 342 47.1
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 4.0e-76 289.3 342 46.2
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.7e-66 257.3 345 41.7
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 4.5e-51 206.1 288 38.2
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 3.6e-48 196.4 385 34.0
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 1.4e-41 174.5 350 32.0
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 9.4e-41 171.8 367 33.0
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 8.0e-40 168.7 350 31.1
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 4.8e-37 159.5 347 31.1
Actinidia30933 Actinidia chinensis HOM05D008906 ORTHO05D010752 3.1e-36 156.8 345 31.0
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.1e-36 156.4 405 28.9
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.3e-34 151.4 351 30.8
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 6.5e-34 149.1 149 50.3
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 4.2e-33 146.4 352 29.5
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 7.2e-33 145.6 343 31.8
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 2.7e-32 143.7 127 63.0
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.8e-31 141.0 357 29.7
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 2.0e-30 137.5 351 28.8
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 1.8e-28 131.0 328 28.7
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 2.0e-27 127.5 350 28.3
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 2.0e-27 127.5 359 29.8
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.9e-26 123.6 431 27.8
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.5e-25 121.3 352 27.8
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.2e-24 118.2 432 27.5
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 6.1e-24 115.9 151 44.4
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 8.8e-23 112.1 357 28.0
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 5.7e-22 109.4 178 38.8
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.7e-21 106.7 406 26.1
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 3.5e-19 100.1 105 56.2
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 2.0e-14 84.3 251 27.9
Sc08g0007410 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.4e-12 77.4 437 23.8
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 4.5e-11 73.2 349 22.9
Sc08g0006150 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.5e-09 67.4 160 29.4


User provided reference genes

Program Settings