Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 6.6e-284 979.9 462 100.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.3e-218 763.1 462 76.6
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.1e-217 758.4 462 76.6
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.5e-216 756.1 449 77.5
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.0e-212 741.9 448 76.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 5.1e-212 741.1 452 76.8
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.7e-212 740.3 463 74.1
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.7e-212 740.3 463 74.1
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.7e-211 736.9 452 75.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.3e-210 736.5 454 76.7
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.2e-210 735.7 454 76.2
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.7e-210 734.9 451 76.7
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 3.1e-209 731.9 451 75.6
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 6.9e-209 730.7 464 73.3
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.0e-209 730.3 464 73.3
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.5e-208 728.0 451 74.9
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.5e-208 728.0 451 74.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 5.9e-208 727.6 450 75.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.0e-207 726.9 452 75.4
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.0e-207 726.9 463 72.8
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.3e-207 726.5 459 73.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.7e-207 726.1 467 73.7
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.2e-207 725.7 462 74.7
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.5e-207 724.2 449 74.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.4e-206 723.0 451 74.9
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.5e-206 722.2 452 75.0
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 2.5e-206 722.2 449 74.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 3.2e-206 721.8 451 75.4
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.5e-206 721.1 463 72.4
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.5e-206 721.1 463 72.8
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 7.2e-206 720.7 462 73.8
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.6e-205 719.5 449 74.6
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-205 719.2 463 73.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 6.1e-205 717.6 451 73.8
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.3e-204 715.7 463 73.7
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 5.1e-204 714.5 465 72.5
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 6.7e-204 714.1 451 74.5
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.5e-203 713.0 462 72.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 2.2e-202 709.1 452 73.2
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 2.2e-202 709.1 460 71.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.2e-202 709.1 449 73.5
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.8e-202 708.8 450 73.1
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.8e-202 708.8 457 73.1
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 2.8e-202 708.8 452 74.3
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 4.8e-202 708.0 449 72.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.2e-202 707.2 462 71.6
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.8e-201 706.1 458 72.5
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.1e-201 705.3 480 70.8
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 9.1e-201 703.7 463 72.1
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.2e-200 703.4 459 72.3
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.2e-200 703.4 449 73.1
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 2.0e-200 702.6 455 72.5
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.3e-199 699.9 455 71.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 3.8e-199 698.4 462 71.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 8.5e-199 697.2 462 70.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.1e-198 696.8 451 71.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.6e-197 693.0 462 69.3
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 2.7e-197 692.2 519 64.2
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.6e-197 691.8 462 69.7
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.7e-197 691.4 462 70.8
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 4.7e-197 691.4 449 73.1
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.0e-196 690.3 463 70.6
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.8e-196 689.5 462 69.7
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.8e-196 689.5 463 69.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.3e-196 689.1 456 70.6
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.3e-196 689.1 462 69.9
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 3.0e-196 688.7 461 70.5
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 8.8e-196 687.2 463 69.3
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 8.8e-196 687.2 452 70.4
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 2.6e-195 685.6 455 69.9
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.6e-195 685.6 462 69.0
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.6e-195 685.6 456 70.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 3.3e-195 685.3 462 69.0
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.7e-194 682.9 435 72.4
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 3.7e-194 681.8 455 71.2
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 5.3e-193 677.9 450 70.9
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 9.1e-193 677.2 463 69.3
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 2.0e-192 676.0 462 69.5
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 2.0e-192 676.0 462 69.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 4.2e-190 668.3 454 69.4
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 7.2e-190 667.5 449 70.4
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.0e-188 663.7 458 69.4
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.0e-188 663.7 478 66.5
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.7e-186 656.4 465 68.0
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.2e-186 656.0 466 66.7
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 4.1e-185 651.7 471 66.2
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 4.1e-185 651.7 465 65.8
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 3.5e-184 648.7 475 65.5
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.5e-182 643.3 362 80.9
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 4.7e-181 638.3 458 66.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 7.5e-179 630.9 452 67.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 3.7e-178 628.6 354 81.9
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.4e-177 626.7 449 67.0
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 2.0e-176 622.9 454 65.0
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.1e-169 598.6 462 62.1
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.6e-168 596.7 454 61.9
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.3e-167 593.6 449 64.1
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.2e-165 587.0 458 60.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 8.0e-165 584.3 453 64.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.2e-160 570.5 413 66.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.2e-157 560.5 458 60.3
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.0e-151 540.8 367 68.9
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 6.7e-119 431.8 403 52.1
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 2.1e-117 426.8 379 53.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.8e-116 423.7 395 51.4
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 6.9e-116 421.8 380 52.1
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 8.1e-109 398.3 388 47.9
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 4.5e-107 392.5 223 79.8
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 7.5e-62 242.3 163 67.5
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.0e-58 231.9 127 80.3
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.8e-52 211.1 120 80.0
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.0e-35 154.5 113 67.3
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 6.6e-34 149.4 322 29.5
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.4e-20 105.1 126 47.6
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 6.9e-15 86.3 53 67.9
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 9.6e-09 65.9 58 44.8
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.8e-07 61.6 43 58.1
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 9.0e-07 59.3 99 28.3


User provided reference genes

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