Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 0.0e+00 2208.3 1110 100.0
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 0.0e+00 1195.3 1191 56.8
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 0.0e+00 1185.2 1189 56.6
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 5.6e-297 1024.6 1186 51.1
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 1.1e-292 1010.4 1180 50.3
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 1.3e-282 976.9 1188 49.1
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 3.4e-278 962.2 1189 47.4
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 2.2e-277 959.5 1178 48.0
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 2.4e-276 956.1 1189 47.1
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 2.4e-260 902.9 1178 46.4
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.6e-259 900.2 1199 46.1
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 2.1e-259 899.8 1215 45.8
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 8.4e-253 877.9 1187 43.8
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 1.2e-251 874.0 1188 44.0
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 1.1e-249 867.5 1181 44.8
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 6.5e-245 851.7 1183 44.5
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 8.4e-245 851.3 1189 43.7
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 3.5e-243 845.9 1192 42.5
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 7.9e-243 844.7 1174 43.2
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 1.8e-242 843.6 1179 43.9
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.9e-242 842.4 1192 42.3
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 9.7e-241 837.8 1181 44.2
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 9.7e-241 837.8 1187 42.2
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 8.2e-240 834.7 1187 43.2
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 6.9e-239 831.6 1188 42.2
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 6.9e-239 831.6 1188 42.2
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 1.4e-236 823.9 1182 43.5
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 5.5e-236 822.0 1194 42.9
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 7.2e-236 821.6 1166 42.1
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 5.1e-234 815.5 1190 41.8
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 6.3e-232 808.5 1189 43.5
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 2.9e-229 799.7 1163 42.4
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.9e-229 799.7 1185 41.5
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 6.1e-227 792.0 1080 44.8
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 6.7e-226 788.5 1218 40.5
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 1.3e-224 784.3 1166 42.6
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 1.7e-224 783.9 1218 40.5
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 1.7e-224 783.9 1185 42.1
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.7e-221 773.9 1125 44.1
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.5e-220 770.0 1182 42.4
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.4e-218 764.2 1181 40.7
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 6.7e-218 761.9 1184 41.0
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 4.4e-217 759.2 1185 40.9
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.1e-212 744.6 1184 40.0
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 1.5e-212 744.2 1182 41.6
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 9.4e-212 741.5 1177 39.6
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 2.7e-211 740.0 1276 39.0
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 6.1e-211 738.8 1012 45.0
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 8.0e-211 738.4 1169 41.5
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.4e-210 737.6 1190 41.3
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 6.3e-208 728.8 1183 40.8
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 1.6e-206 724.2 1174 41.5
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 1.7e-205 720.7 1186 39.8
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 5.0e-205 719.2 1181 40.2
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 2.1e-203 713.8 1112 40.7
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 1.0e-202 711.4 1192 39.5
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 4.0e-202 709.5 1133 40.5
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.5e-201 707.6 1189 39.4
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 5.7e-201 705.7 1183 39.1
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 4.9e-200 702.6 995 44.3
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 9.2e-199 698.4 1181 40.1
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 3.2e-191 673.3 1175 38.6
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 1.6e-190 671.0 1182 38.1
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 2.5e-188 663.7 835 48.3
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 2.5e-188 663.7 1184 37.8
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 2.1e-187 660.6 1182 37.9
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 1.2e-182 644.8 1185 36.6
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 1.7e-181 641.0 1176 36.6
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 2.3e-181 640.6 670 52.1
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 3.0e-181 640.2 1176 36.8
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 8.6e-181 638.6 1181 36.8
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 8.6e-181 638.6 1180 37.2
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 1.9e-180 637.5 1175 36.7
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 3.3e-180 636.7 1178 35.9
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.2e-179 634.8 1176 36.1
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 8.1e-179 632.1 1177 36.5
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 1.1e-178 631.7 1176 36.3
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 5.8e-177 625.9 1160 37.8
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 2.4e-175 620.5 1177 36.4
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 4.1e-175 619.8 1174 35.7
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 1.2e-174 618.2 1174 36.2
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 1.7e-173 614.4 945 41.5
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 3.3e-172 610.1 1063 38.9
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 4.0e-170 603.2 1236 36.2
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 2.2e-168 597.4 824 43.6
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.1e-167 595.1 1190 35.4
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 3.5e-166 590.1 1178 34.7
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 4.7e-163 579.7 1188 35.1
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 5.8e-161 572.8 1182 35.3
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 4.0e-154 550.1 989 38.6
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 1.5e-148 531.6 1229 32.6
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 2.5e-148 530.8 825 39.5
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 8.1e-139 499.2 1264 30.6
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 2.4e-130 471.1 974 34.6
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 8.0e-102 376.3 1254 26.9
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 2.0e-100 371.7 844 32.9
Oeu021362.1 Olea europaea HOM05D004959 ORTHO05D005961 2.8e-99 367.9 437 46.0
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 9.8e-92 342.8 455 46.2
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 9.2e-82 309.7 797 31.7
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 3.5e-81 307.8 284 58.8
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 5.9e-81 307.0 1125 26.5
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 3.6e-78 297.7 284 57.0
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 3.6e-78 297.7 1288 24.7
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 1.2e-76 292.7 284 54.9
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 5.7e-76 290.4 284 56.3
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 6.4e-75 287.0 284 54.6
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 6.4e-75 287.0 1293 24.7
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 7.0e-74 283.5 284 54.6
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 5.0e-72 277.3 284 53.9
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 1.9e-63 248.8 247 55.1
CDE04G1301 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 2.5e-63 248.4 427 37.7
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 9.5e-63 246.5 284 50.4
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 4.1e-58 231.1 247 49.8
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 2.7e-57 228.4 310 45.2
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 4.6e-57 227.6 1137 24.8
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.7e-56 225.7 311 43.7
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 8.9e-53 213.4 175 61.1
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 1.2e-49 203.0 179 57.0
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 6.0e-49 200.7 176 58.5
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 1.0e-48 199.9 290 43.1
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.1e-45 189.9 172 57.6
Aqoxy5G03191 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.4e-44 184.9 520 30.6
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 5.8e-44 184.1 175 52.6
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 1.4e-42 179.5 846 26.1
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 2.4e-42 178.7 168 56.0
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 2.7e-41 175.3 181 49.2
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 2.4e-34 152.1 439 29.4
Phvul.005G124551 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.1e-29 136.7 302 33.8
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 1.1e-29 136.7 139 56.1
Atru.chr10.384 Acer truncatum HOM05D004959 ORTHO05D005961 1.9e-26 125.9 228 34.2
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 4.2e-26 124.8 256 34.0
Aqoxy5G03189 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 6.9e-21 107.5 209 35.9
TPR.G940 Trifolium pratense HOM05D004959 ORTHO05D005961 8.4e-19 100.5 99 54.5
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 9.3e-18 97.1 105 47.6
CDE04G2317 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 1.6e-17 96.3 246 34.6
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.6e-17 96.3 106 49.1
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 5.9e-12 77.8 87 48.3
Phvul.005G124501 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 5.9e-12 77.8 228 29.8
C03p82750 Brassica napus HOM05D000005 ORTHO05D000449 3.8e-11 75.1 89 46.1
BcaC01g00655 Brassica carinata HOM05D004959 ORTHO05D005961 1.1e-10 73.6 136 39.7
BolC3t20557H Brassica oleracea HOM05D000005 ORTHO05D000449 1.1e-10 73.6 108 40.7
SHI28140 Sapria himalayana HOM05D004959 ORTHO05D005961 7.2e-10 70.9 62 58.1
Dinv16431 Davidia involucrata HOM05D004959 ORTHO05D005961 6.1e-09 67.8 109 43.1
BcaC01g00652 Brassica carinata HOM05D004959 ORTHO05D005961 1.4e-08 66.6 47 68.1
C03p82730 Brassica napus HOM05D004959 ORTHO05D005961 3.0e-08 65.5 47 66.0
BolC3t20554H Brassica oleracea HOM05D004959 ORTHO05D005961 3.0e-08 65.5 47 66.0


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