Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 3.0e-102 375.2 185 100.0
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 6.0e-63 244.6 162 73.5
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 2.1e-60 236.1 162 74.1
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.8e-59 233.0 158 71.5
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 3.4e-58 228.8 148 71.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 7.6e-58 227.6 156 71.2
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.2e-57 226.1 191 63.4
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.9e-57 225.7 157 72.0
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 3.8e-57 225.3 168 64.3
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.1e-56 223.8 165 67.3
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 2.5e-56 222.6 175 65.1
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 9.3e-56 220.7 163 66.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.2e-55 220.3 153 70.6
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.1e-55 219.5 156 68.6
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 2.7e-55 219.2 163 66.3
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.5e-55 218.8 138 77.5
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 4.6e-55 218.4 168 64.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.3e-54 216.9 161 65.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-54 216.9 157 66.9
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.3e-54 216.9 155 67.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 2.3e-54 216.1 152 68.4
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.3e-54 216.1 158 65.8
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.9e-54 215.3 139 74.8
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 8.7e-54 214.2 164 64.0
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.1e-53 213.8 152 67.8
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.1e-53 213.8 162 64.2
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.5e-53 213.4 167 62.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.3e-53 212.2 155 63.9
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.3e-53 212.2 159 63.5
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 9.6e-53 210.7 147 66.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 9.6e-53 210.7 150 68.0
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.1e-52 209.5 152 67.8
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.8e-52 209.1 157 65.6
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 3.7e-52 208.8 144 70.1
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 4.8e-52 208.4 183 60.1
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.3e-52 208.0 144 70.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 8.2e-52 207.6 157 65.6
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.1e-51 207.2 161 64.0
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.4e-51 206.8 159 64.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.8e-51 206.5 157 65.0
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.8e-51 206.5 157 65.0
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.8e-51 206.5 148 66.2
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 3.1e-51 205.7 194 57.2
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 4.1e-51 205.3 140 67.9
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 4.1e-51 205.3 147 64.6
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 9.0e-51 204.1 148 67.6
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 9.0e-51 204.1 159 66.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.5e-50 203.4 159 62.9
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 2.6e-50 202.6 158 63.3
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.6e-50 202.6 148 66.2
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 3.4e-50 202.2 157 61.8
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 3.4e-50 202.2 155 64.5
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 4.5e-50 201.8 159 65.4
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 7.6e-50 201.1 148 66.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 7.6e-50 201.1 169 60.9
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 7.6e-50 201.1 159 63.5
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.0e-49 200.7 148 64.9
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.7e-49 199.9 148 64.9
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.9e-49 199.1 165 58.2
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 5.0e-49 198.4 159 62.9
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.1e-48 197.2 149 66.4
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.1e-48 197.2 168 60.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.9e-48 196.4 148 64.9
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.9e-48 196.4 149 65.1
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 2.5e-48 196.1 167 58.7
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 2.5e-48 196.1 149 64.4
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.2e-48 195.7 151 66.9
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.2e-48 195.3 138 68.1
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.6e-47 193.4 212 49.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.1e-47 193.0 162 63.0
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.7e-47 192.6 148 64.2
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.7e-47 192.6 150 66.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.3e-46 190.3 139 64.7
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.3e-46 189.5 166 58.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 6.7e-46 188.0 141 66.0
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 8.7e-46 187.6 163 55.8
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.9e-45 186.4 174 56.3
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.3e-44 183.7 144 61.1
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.3e-44 183.7 154 59.1
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.6e-44 183.3 143 59.4
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 4.1e-43 178.7 141 59.6
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 6.5e-41 171.4 129 65.1
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.4e-38 163.7 150 56.7
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 4.7e-31 138.7 130 50.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.3e-30 136.3 163 42.9
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.1e-29 134.0 109 59.6
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.1e-27 127.5 140 44.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 5.9e-26 121.7 73 76.7
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 2.2e-25 119.8 136 45.6
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.8e-22 110.2 140 42.1
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.1e-19 100.9 96 55.2
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.0e-17 94.4 77 58.4
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.4e-14 84.0 113 43.4
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 4.0e-14 82.4 105 41.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 1.2e-13 80.9 113 42.5
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.2e-13 80.9 62 59.7
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 7.0e-11 71.6 78 48.7


User provided reference genes

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