Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 1.2e-61 239.6 112 100.0
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 3.3e-24 115.2 59 89.8
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 4.4e-24 114.8 59 89.8
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 4.4e-24 114.8 59 89.8
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 4.4e-24 114.8 59 89.8
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 5.7e-24 114.4 59 88.1
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 7.4e-24 114.0 59 89.8
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 7.4e-24 114.0 60 86.7
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 7.4e-24 114.0 63 82.5
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 7.4e-24 114.0 63 82.5
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 7.4e-24 114.0 63 82.5
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 7.4e-24 114.0 59 89.8
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 9.7e-24 113.6 79 69.6
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 1.3e-23 113.2 60 86.7
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 1.3e-23 113.2 57 91.2
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 1.7e-23 112.8 58 89.7
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.7e-23 112.8 56 92.9
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.7e-23 112.8 56 92.9
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.7e-23 112.8 56 92.9
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.7e-23 112.8 56 92.9
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.2e-23 112.5 66 80.3
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 2.2e-23 112.5 56 91.1
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 2.8e-23 112.1 57 89.5
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 2.8e-23 112.1 56 92.9
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 3.7e-23 111.7 56 91.1
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 3.7e-23 111.7 56 91.1
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 3.7e-23 111.7 56 91.1
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 3.7e-23 111.7 57 89.5
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 3.7e-23 111.7 56 91.1
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 3.7e-23 111.7 59 88.1
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 4.8e-23 111.3 57 89.5
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 4.8e-23 111.3 59 86.4
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 4.8e-23 111.3 59 86.4
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 6.3e-23 110.9 59 84.7
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 6.3e-23 110.9 59 84.7
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 6.3e-23 110.9 56 91.1
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 6.3e-23 110.9 56 91.1
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 6.3e-23 110.9 56 91.1
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 6.3e-23 110.9 57 87.7
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 6.3e-23 110.9 57 87.7
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 6.3e-23 110.9 56 91.1
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 8.2e-23 110.5 63 82.5
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 8.2e-23 110.5 57 87.7
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 8.2e-23 110.5 60 83.3
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 8.2e-23 110.5 60 85.0
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 1.1e-22 110.2 57 87.7
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 1.1e-22 110.2 56 89.3
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 1.1e-22 110.2 56 89.3
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 1.1e-22 110.2 56 89.3
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 1.1e-22 110.2 56 89.3
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 1.1e-22 110.2 57 87.7
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 1.1e-22 110.2 57 87.7
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 1.1e-22 110.2 59 86.4
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.4e-22 109.8 56 89.3
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 1.4e-22 109.8 59 86.4
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 1.4e-22 109.8 56 89.3
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 1.4e-22 109.8 56 89.3
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 1.4e-22 109.8 56 89.3
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 1.4e-22 109.8 56 89.3
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 1.8e-22 109.4 59 84.7
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 2.4e-22 109.0 56 89.3
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 2.4e-22 109.0 59 84.7
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 3.1e-22 108.6 59 84.7
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 3.1e-22 108.6 59 83.1
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 3.1e-22 108.6 61 80.3
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 4.1e-22 108.2 59 84.7
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 4.1e-22 108.2 61 80.3
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 5.3e-22 107.8 73 74.0
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 5.3e-22 107.8 60 83.3
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 7.0e-22 107.5 56 85.7
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 7.0e-22 107.5 62 79.0
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 9.1e-22 107.1 62 79.0
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 9.1e-22 107.1 57 84.2
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 1.2e-21 106.7 56 85.7
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 1.2e-21 106.7 63 79.4
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 1.2e-21 106.7 58 84.5
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 1.2e-21 106.7 58 84.5
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 1.2e-21 106.7 56 87.5
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 1.6e-21 106.3 54 90.7
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.6e-21 106.3 56 87.5
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.0e-21 105.9 57 86.0
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 2.6e-21 105.5 61 78.7
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.6e-21 105.5 55 87.3
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.6e-21 105.5 55 87.3
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 2.6e-21 105.5 55 87.3
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 2.6e-21 105.5 55 87.3
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 2.6e-21 105.5 59 81.4
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 3.5e-21 105.1 56 85.7
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 3.5e-21 105.1 58 84.5
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 3.5e-21 105.1 55 83.6
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 4.5e-21 104.8 65 72.3
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 4.5e-21 104.8 60 76.7
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 4.5e-21 104.8 60 76.7
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 4.5e-21 104.8 62 79.0
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 5.9e-21 104.4 58 82.8
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 5.9e-21 104.4 56 82.1
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 5.9e-21 104.4 55 85.5
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 5.9e-21 104.4 60 76.7
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 5.9e-21 104.4 56 83.9
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 5.9e-21 104.4 59 78.0
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 1.0e-20 103.6 58 82.8
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 1.3e-20 103.2 56 83.9
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 1.3e-20 103.2 56 82.1
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 2.2e-20 102.4 55 83.6
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 2.9e-20 102.1 54 85.2
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 2.9e-20 102.1 56 80.4
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 3.8e-20 101.7 56 80.4
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 3.8e-20 101.7 61 77.0
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 5.0e-20 101.3 78 62.8
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 8.5e-20 100.5 56 82.1
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 1.9e-19 99.4 59 78.0
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 3.2e-19 98.6 57 73.7
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-19 97.8 57 78.9
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 5.5e-19 97.8 63 71.4
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 5.5e-19 97.8 60 73.3
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 9.4e-19 97.1 62 72.6
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 6.1e-18 94.4 57 75.4
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-16 89.7 57 73.7
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 2.6e-16 89.0 57 70.2
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 4.4e-16 88.2 78 55.1
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 1.6e-13 79.7 42 85.7
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 5.9e-13 77.8 52 63.5
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 5.0e-12 74.7 53 62.3
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 2.3e-09 65.9 38 81.6
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 1.1e-06 57.0 49 55.1


User provided reference genes

Program Settings