Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A836G20 Lonicera japonica HOM05D000747 ORTHO05D004807 1.2e-269 932.6 472 100.0
Dinv15128 Davidia involucrata HOM05D000747 ORTHO05D004807 2.4e-185 652.5 536 64.6
Actinidia18481 Actinidia chinensis HOM05D000747 ORTHO05D004807 3.9e-175 618.6 536 60.8
vmacro07974 Vaccinium macrocarpon HOM05D000747 ORTHO05D004807 6.7e-175 617.8 539 61.0
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla HOM05D000747 ORTHO05D004807 1.9e-169 599.7 533 60.0
GSVIVG01034942001 Vitis vinifera HOM05D000747 ORTHO05D004807 2.5e-169 599.4 535 59.6
CSS0023043 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 6.1e-168 594.7 533 61.0
TAR633G1529 Trochodendron aralioides HOM05D000747 ORTHO05D004807 1.9e-166 589.7 536 58.2
Thecc.04G307300 Theobroma cacao HOM05D000747 ORTHO05D004807 2.5e-166 589.3 536 57.6
Rhsim04G0243000 Rhododendron simsii HOM05D000747 ORTHO05D004807 4.3e-166 588.6 612 53.9
Duzib151G0433 Durio zibethinus HOM05D000747 ORTHO05D004807 2.2e-165 586.3 533 57.8
Gohir.A09G241400 Gossypium hirsutum HOM05D000747 ORTHO05D004807 1.8e-164 583.2 532 56.6
QL06p013303 Quercus lobata HOM05D000747 ORTHO05D004807 1.8e-164 583.2 533 58.7
TAR362G0993 Trochodendron aralioides HOM05D000747 ORTHO05D004807 3.1e-164 582.4 533 58.0
Gorai.006G265700 Gossypium raimondii HOM05D000747 ORTHO05D004807 4.1e-164 582.0 533 56.3
Oeu052157.1 Olea europaea HOM05D000747 ORTHO05D004807 1.5e-163 580.1 533 58.2
Gohir.D09G242100 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.0e-163 579.7 533 56.1
Peaxi162Scf00126g01514 Petunia axillaris HOM05D000747 ORTHO05D004807 3.4e-163 578.9 532 58.8
RcHm_v2.0_Chr4g0426201 Rosa chinensis HOM05D000747 ORTHO05D004807 1.0e-162 577.4 537 58.5
Prupe.1G111600 Prunus persica HOM05D000747 ORTHO05D004807 3.2e-161 572.4 541 58.6
Atru.chr4.3105 Acer truncatum HOM05D000747 ORTHO05D004807 5.5e-161 571.6 532 57.9
MD16G1148200 Malus domestica HOM05D000747 ORTHO05D004807 9.4e-161 570.9 536 57.6
Sopen01g023220 Solanum pennellii HOM05D000747 ORTHO05D004807 6.1e-160 568.2 532 57.7
Solyc01g057900.3 Solanum lycopersicum HOM05D000747 ORTHO05D004807 7.9e-160 567.8 532 57.7
Duzib212G0904 Durio zibethinus HOM05D000747 ORTHO05D004807 1.4e-159 567.0 536 56.2
MD13G1148100 Malus domestica HOM05D000747 ORTHO05D004807 1.4e-159 567.0 536 57.1
Ciclev10004231m.g Citrus clementina HOM05D000747 ORTHO05D004807 3.0e-159 565.8 532 56.6
Migut.G00024 Erythranthe guttata HOM05D000747 ORTHO05D004807 3.0e-159 565.8 531 55.9
Gohir.D10G182300 Gossypium hirsutum HOM05D000747 ORTHO05D004807 3.9e-159 565.5 533 55.9
TWI53G1735 Tripterygium wilfordii HOM05D000747 ORTHO05D004807 3.9e-159 565.5 537 57.7
Potri.010G150000 Populus trichocarpa HOM05D000747 ORTHO05D004807 5.1e-159 565.1 536 57.6
CiPaw.01G133500 Carya illinoinensis HOM05D000747 ORTHO05D004807 6.7e-159 564.7 536 56.9
Gorai.011G204200 Gossypium raimondii HOM05D000747 ORTHO05D004807 1.1e-158 563.9 533 55.7
Gohir.A10G175700 Gossypium hirsutum HOM05D000747 ORTHO05D004807 3.3e-158 562.4 531 55.9
MBI18_g27389_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D004807 1.3e-157 560.5 532 56.4
Manes.03G208600 Manihot esculenta HOM05D000747 ORTHO05D004807 1.1e-156 557.4 535 56.4
FvH4_4g20760 Fragaria vesca HOM05D000747 ORTHO05D004807 3.1e-156 555.8 537 56.2
Sc25g0001570 Simmondsia chinensis HOM05D000747 ORTHO05D004807 5.3e-156 555.1 535 55.5
Lsat_1_v5_gn_6_70541 Lactuca sativa HOM05D000747 ORTHO05D004807 3.4e-155 552.4 537 54.0
MSTRG.10174 Avicennia marina HOM05D000747 ORTHO05D004807 5.9e-155 551.6 527 57.1
FAN07G0175 Fragaria x ananassa HOM05D000747 ORTHO05D004807 5.9e-155 551.6 541 56.0
FAN17G1353 Fragaria x ananassa HOM05D000747 ORTHO05D004807 2.9e-154 549.3 539 55.8
CAN.G170.17 Capsicum annuum HOM05D000747 ORTHO05D004807 6.5e-154 548.1 534 56.7
CAN.G3221.1 Capsicum annuum HOM05D000747 ORTHO05D004807 6.5e-154 548.1 534 56.7
CANSAT78G0170 Cannabis sativa HOM05D000747 ORTHO05D004807 1.2e-152 543.9 536 54.7
SGA_v2.0_scaffold157G37358 Striga asiatica HOM05D000747 ORTHO05D004807 6.1e-152 541.6 519 55.7
Cc03_g00480 Coffea canephora HOM05D000747 ORTHO05D004807 3.9e-151 538.9 535 55.0
Sabra08G0076600 Salix brachista HOM05D000747 ORTHO05D004807 6.7e-151 538.1 536 54.7
Sabra10G0115600 Salix brachista HOM05D000747 ORTHO05D004807 6.7e-151 538.1 536 55.6
Eucgr.B03986 Eucalyptus grandis HOM05D000747 ORTHO05D004807 8.8e-151 537.7 536 54.5
Potri.008G101300 Populus trichocarpa HOM05D000747 ORTHO05D004807 8.8e-151 537.7 536 54.5
HanXRQChr06g0182841 Helianthus annuus HOM05D000747 ORTHO05D004807 5.7e-150 535.0 537 53.4
Nn3g21805 Nelumbo nucifera HOM05D000747 ORTHO05D004807 9.7e-150 534.3 536 54.1
CSS0019056 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 1.7e-149 533.5 506 57.9
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea HOM05D000747 ORTHO05D004807 3.7e-149 532.3 534 54.9
Cpa.g.sc146.73 Carica papaya HOM05D000747 ORTHO05D004807 6.3e-149 531.6 535 54.6
THA.LOC104820321 Tarenaya hassleriana HOM05D000747 ORTHO05D004807 7.0e-148 528.1 535 54.0
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea HOM05D000747 ORTHO05D004807 9.1e-148 527.7 534 54.5
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea HOM05D000747 ORTHO05D004807 5.9e-147 525.0 534 53.6
Sed0005984 Sechium edule HOM05D000747 ORTHO05D004807 1.3e-146 523.9 536 50.9
ClCG06G004370 Citrullus lanatus HOM05D000747 ORTHO05D004807 1.7e-146 523.5 536 51.9
Lj6g0013861 Lotus japonicus HOM05D000747 ORTHO05D004807 1.5e-145 520.4 533 53.5
Ca_00947_v3 Cicer arietinum L. HOM05D000747 ORTHO05D004807 3.2e-145 519.2 530 54.0
Phvul.006G120900 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 5.5e-145 518.5 534 53.6
BcaC05g28820 Brassica carinata HOM05D000747 ORTHO05D004807 9.4e-145 517.7 536 51.9
Glyma.15G137000 Glycine max HOM05D000747 ORTHO05D004807 2.7e-144 516.2 534 52.8
MELO3C021252.2 Cucumis melo HOM05D000747 ORTHO05D004807 1.4e-143 513.8 540 50.9
C05p49250 Brassica napus HOM05D000747 ORTHO05D004807 2.3e-143 513.1 537 51.8
AL3G30230 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 3.0e-143 512.7 535 51.6
Psat1g162680 Pisum sativum HOM05D000747 ORTHO05D004807 6.7e-143 511.5 530 54.0
Sp3g15400 Schrenkiella parvula HOM05D000747 ORTHO05D004807 1.5e-142 510.4 536 51.9
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea HOM05D000747 ORTHO05D004807 2.6e-142 509.6 552 51.3
BolC5t33666H Brassica oleracea HOM05D000747 ORTHO05D004807 2.6e-142 509.6 537 51.6
AT3G17205 Arabidopsis thaliana HOM05D000747 ORTHO05D004807 4.4e-142 508.8 535 51.4
Thhalv10019984m.g Eutrema salsugineum HOM05D000747 ORTHO05D004807 9.7e-142 507.7 536 51.1
TPR.G10108 Trifolium pratense HOM05D000747 ORTHO05D004807 1.7e-141 506.9 530 53.4
Lalb_Chr15g0089041 Lupinus albus HOM05D000747 ORTHO05D004807 2.8e-141 506.1 534 51.9
BcaB06g25812 Brassica carinata HOM05D000747 ORTHO05D004807 3.7e-141 505.8 536 51.5
A05p32580 Brassica napus HOM05D000747 ORTHO05D004807 4.8e-141 505.4 537 51.4
BraA05t22082Z Brassica rapa HOM05D000747 ORTHO05D004807 4.8e-141 505.4 537 51.4
Sed0003045 Sechium edule HOM05D000747 ORTHO05D004807 1.4e-140 503.8 535 51.2
Carub.0003s1696 Capsella rubella HOM05D000747 ORTHO05D004807 7.0e-140 501.5 535 50.3
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 9.1e-140 501.1 478 56.9
EL10Ac3g06290 Beta vulgaris HOM05D000747 ORTHO05D004807 1.2e-139 500.7 535 51.4
ECA233G3437 Erigeron canadensis HOM05D000747 ORTHO05D004807 1.6e-139 500.4 545 51.0
Aqoxy2G02629 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 2.0e-139 500.0 570 48.4
Glyma.07G235800 Glycine max HOM05D000747 ORTHO05D004807 5.9e-139 498.4 534 53.0
BcaC09g48678 Brassica carinata HOM05D000747 ORTHO05D004807 6.5e-138 495.0 537 50.3
Medtr2g033040 Medicago truncatula HOM05D000747 ORTHO05D004807 1.1e-137 494.2 530 52.1
Glyma.17G037600 Glycine max HOM05D000747 ORTHO05D004807 1.2e-136 490.7 534 51.9
C01p47020 Brassica napus HOM05D000747 ORTHO05D004807 1.6e-136 490.3 538 50.2
DCAR_002525 Daucus carota HOM05D000747 ORTHO05D004807 3.6e-136 489.2 532 50.9
AUR62002590 Chenopodium quinoa HOM05D000747 ORTHO05D004807 1.8e-135 486.9 537 50.8
BcaB04g20855 Brassica carinata HOM05D000747 ORTHO05D004807 3.0e-135 486.1 538 50.0
BolC1t04670H Brassica oleracea HOM05D000747 ORTHO05D004807 5.2e-135 485.3 538 49.8
CDE11G0596 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 6.8e-135 485.0 532 50.2
BraA01t03772Z Brassica rapa HOM05D000747 ORTHO05D004807 2.0e-134 483.4 538 49.8
CDE05G1257 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 2.0e-134 483.4 532 49.2
VMungo1215G1053 Vigna mungo HOM05D000747 ORTHO05D004807 4.4e-134 482.3 534 50.7
Aa31LG8G4180 Aethionema arabicum HOM05D000747 ORTHO05D004807 2.8e-133 479.6 535 49.2
A01p37100 Brassica napus HOM05D000747 ORTHO05D004807 4.8e-133 478.8 538 49.8
PSO761G0701 Papaver somniferum HOM05D000747 ORTHO05D004807 4.1e-132 475.7 537 48.2
PGR031G1986 Punica granatum HOM05D000747 ORTHO05D004807 1.2e-131 474.2 536 49.6
PSO210G6954 Papaver somniferum HOM05D000747 ORTHO05D004807 2.7e-131 473.0 537 47.7
Phvul.003G118500 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 1.3e-130 470.7 532 50.6
Haze_00834 Corylus avellana HOM05D000747 ORTHO05D004807 3.3e-129 466.1 563 49.0
ATR0693G276 Amborella trichopoda HOM05D000747 ORTHO05D004807 1.3e-122 444.1 534 45.7
Hund12236 Selenicereus undatus HOM05D000747 ORTHO05D004807 1.0e-119 434.5 663 41.0
CAN.G170.20 Capsicum annuum HOM05D000747 ORTHO05D004807 1.5e-118 430.6 449 53.2
Aqoxy5G03355 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 1.6e-115 420.6 549 42.8
Ah.07g203890 Amaranthus hybridus HOM05D000747 ORTHO05D004807 1.5e-113 414.1 531 45.4
Os05g0159000 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D004807 1.7e-109 400.6 532 43.8
Nitab4.5_0005403g0020 Nicotiana tabacum HOM05D000747 ORTHO05D004807 3.0e-106 389.8 375 56.3
Nitab4.5_0001334g0040 Nicotiana tabacum HOM05D000747 ORTHO05D004807 5.1e-106 389.0 413 52.8
CARHR092470 Cardamine hirsuta HOM05D000747 ORTHO05D004807 3.3e-105 386.3 433 49.2
HPP92_015995 Vanilla planifolia HOM05D000747 ORTHO05D004807 1.6e-104 384.0 531 41.8
COL.COLO4_34559 Corchorus olitorius HOM05D000747 ORTHO05D004807 5.1e-82 309.3 213 72.3
Duzib052G0753 Durio zibethinus HOM05D000747 ORTHO05D004807 5.1e-82 309.3 228 65.4
SalBow8G1635 Salvia bowleyana HOM05D000747 ORTHO05D004807 9.0e-79 298.5 398 45.0
SEGI_11758 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 1.7e-77 294.3 487 38.0
Mapoly0140s0005 Marchantia polymorpha HOM05D000747 ORTHO05D004807 1.3e-74 284.6 535 35.3
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis HOM05D000747 ORTHO05D004807 6.7e-74 282.3 543 35.5
Medtr2g033055 Medicago truncatula HOM05D000747 ORTHO05D004807 6.2e-64 249.2 214 60.7
Pp3c17_16520 Physcomitrium patens HOM05D000747 ORTHO05D004807 9.0e-63 245.4 543 33.0
SMO165G0153 Selaginella moellendorffii HOM05D000747 ORTHO05D004807 1.2e-62 245.0 536 31.2
unitig_88.g27699 Utricularia gibba HOM05D000747 ORTHO05D004807 1.0e-61 241.9 425 37.4
SalBow8G3583 Salvia bowleyana HOM05D000747 ORTHO05D004807 7.9e-59 232.3 166 68.7
Zm00001eb412620 Zea mays HOM05D000747 ORTHO05D004807 1.8e-55 221.1 258 44.2
AL947U10010 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 2.5e-52 210.7 198 51.0
SHI00092 Sapria himalayana HOM05D000747 ORTHO05D004807 7.2e-52 209.1 757 25.2
Medtr2g033080 Medicago truncatula HOM05D000747 ORTHO05D004807 2.1e-51 207.6 246 48.0
Actinidia31572 Actinidia chinensis HOM05D000747 ORTHO05D004807 4.6e-51 206.5 440 35.5
Gohir.A12G078600 Gossypium hirsutum HOM05D000747 ORTHO05D028421 6.3e-48 196.1 185 56.8
MD16G1155700 Malus domestica HOM05D000747 ORTHO05D004807 2.2e-45 187.6 210 48.6
HPP92_015992 Vanilla planifolia HOM05D000747 ORTHO05D004807 1.1e-33 148.7 143 55.9
CsaV3_6G020210 Cucumis sativus L. HOM05D000747 ORTHO05D004807 4.8e-24 116.7 96 55.2
CsaV3_6G021240 Cucumis sativus L. HOM05D000747 ORTHO05D004807 4.8e-24 116.7 96 55.2
MD17G1270000 Malus domestica HOM05D000747 ORTHO05D004807 1.5e-20 105.1 57 84.2
VMungo1383G3016 Vigna mungo HOM05D000747 ORTHO05D009363 1.2e-19 102.1 121 47.1
SGA_v2.0_scaffold64G22058 Striga asiatica HOM05D000747 ORTHO05D004807 8.8e-18 95.9 76 60.5
VMungo1309G1015 Vigna mungo HOM05D000747 ORTHO05D009363 1.2e-17 95.5 68 70.6
Zm00001eb282520 Zea mays HOM05D000747 ORTHO05D004807 4.5e-14 83.6 123 36.6
SEGI_11859 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 1.9e-12 78.2 51 60.8
SHI00093 Sapria himalayana HOM05D000747 ORTHO05D028421 1.8e-10 71.6 53 71.7
unitig_88.g27698 Utricularia gibba HOM05D000747 ORTHO05D028421 2.6e-09 67.8 53 69.8
CSS0050278 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D028421 8.3e-08 62.8 53 66.0


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