Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 4.4e-111 404.8 236 100.0
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 9.8e-50 201.1 233 61.4
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 2.9e-33 146.4 239 48.1
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 1.2e-28 131.0 238 49.2
DCAR_023359 Daucus carota HOM05D012194 ORTHO05D015569 3.1e-27 126.3 231 51.1
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.3e-25 120.9 235 48.1
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 6.4e-25 118.6 197 52.3
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 1.9e-21 107.1 183 54.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.7e-20 102.4 233 45.5
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 6.2e-20 102.1 233 36.5
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 4.0e-19 99.4 237 45.1
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 2.6e-18 96.7 238 45.0
PGSC0003DMG400003491 Solanum tuberosum HOM05D012194 ORTHO05D015569 2.6e-18 96.7 236 44.9
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.4e-18 96.3 231 44.2
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 4.4e-18 95.9 226 45.6
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 5.8e-18 95.5 232 44.0
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 7.5e-18 95.1 241 46.1
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 7.5e-18 95.1 237 41.8
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.3e-17 94.4 237 42.6
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 1.7e-17 94.0 235 44.7
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 2.9e-17 93.2 230 43.0
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 2.9e-17 93.2 234 46.2
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 3.7e-17 92.8 237 41.8
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 6.4e-17 92.0 241 45.6
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 8.3e-17 91.7 232 46.6
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.1e-16 91.3 236 45.8
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 1.1e-16 91.3 237 42.6
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 1.9e-16 90.5 236 45.8
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.4e-16 90.1 229 45.9
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 3.2e-16 89.7 238 44.5
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 3.2e-16 89.7 238 33.6
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 5.4e-16 89.0 229 44.1
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 9.2e-16 88.2 241 44.8
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 2.7e-15 86.7 236 43.6
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 4.6e-15 85.9 179 49.2
Solyc01g058320.4 Solanum lycopersicum HOM05D012194 ORTHO05D015569 6.0e-15 85.5 213 45.5
ECA233G3364 Erigeron canadensis HOM05D009154 ORTHO05D004310 2.3e-14 83.6 226 32.7
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 5.1e-14 82.4 228 32.5
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 8.6e-14 81.6 232 33.6
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.5e-13 80.9 222 33.8
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 1.5e-13 80.9 209 44.5
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.9e-13 80.5 237 43.0
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 2.5e-13 80.1 236 33.1
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 2.5e-13 80.1 229 32.3
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 4.3e-13 79.3 224 32.6
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 7.3e-13 78.6 184 46.2
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 9.5e-13 78.2 220 44.5
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 4.7e-12 75.9 245 33.1
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 6.2e-12 75.5 225 45.8
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 1.1e-11 74.7 238 40.3
DCAR_030455 Daucus carota HOM05D009154 ORTHO05D004310 5.2e-11 72.4 121 43.0
Nitab4.5_0004165g0050 Nicotiana tabacum HOM05D012194 ORTHO05D015569 1.2e-10 71.2 237 39.2
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 1.2e-10 71.2 188 45.2
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 1.2e-10 71.2 240 34.2
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 1.5e-10 70.9 270 29.3
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.0e-10 70.5 238 42.0
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 3.4e-10 69.7 213 40.4
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 4.4e-10 69.3 79 49.4
Nitab4.5_0000647g0240 Nicotiana tabacum HOM05D012194 ORTHO05D015569 4.4e-10 69.3 237 39.2
Solyc05g053360.3 Solanum lycopersicum HOM05D012194 ORTHO05D015569 5.8e-10 68.9 238 38.2
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 5.8e-10 68.9 74 50.0
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 7.6e-10 68.6 203 46.3
Sopen05g031870 Solanum pennellii HOM05D012194 ORTHO05D015569 7.6e-10 68.6 238 38.7
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 7.6e-10 68.6 243 34.2
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 9.9e-10 68.2 231 41.6
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.7e-09 67.4 234 39.3
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 2.9e-09 66.6 237 39.7
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 3.7e-09 66.2 231 38.5
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 3.7e-09 66.2 238 38.7
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 6.4e-09 65.5 171 46.2
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 6.4e-09 65.5 243 29.6
CAN.G305.60 Capsicum annuum HOM05D012194 ORTHO05D015569 8.4e-09 65.1 230 38.7
Lsat_1_v5_gn_6_116040 Lactuca sativa HOM05D031577 ORTHO05D004310 8.4e-09 65.1 233 38.2
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 1.4e-08 64.3 230 36.5
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.4e-08 64.3 249 31.3
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.4e-08 64.3 249 30.9
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.4e-08 64.3 197 30.5
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.9e-08 63.9 243 37.9
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 2.4e-08 63.5 244 37.7
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 3.2e-08 63.2 229 38.9
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 3.2e-08 63.2 202 42.1
HPP92_016078 Vanilla planifolia HOM05D062696 ORTHO05D051552 3.2e-08 63.2 137 53.3
PGSC0003DMG400027207 Solanum tuberosum HOM05D012194 ORTHO05D015569 4.1e-08 62.8 238 37.4
CDE02G3511 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 5.4e-08 62.4 236 39.0
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 5.4e-08 62.4 75 46.7
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 5.4e-08 62.4 75 46.7
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 5.4e-08 62.4 227 31.7
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 7.1e-08 62.0 233 38.2
CANSAT54G0035 Cannabis sativa HOM05D009154 ORTHO05D014149 9.2e-08 61.6 99 41.4
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 9.2e-08 61.6 76 50.0
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 1.6e-07 60.8 238 37.8
CDE09G0065 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 2.1e-07 60.5 236 39.4
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 2.1e-07 60.5 76 48.7
Peaxi162Scf00164g00910 Petunia axillaris HOM05D012194 ORTHO05D015569 2.1e-07 60.5 196 37.2
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 3.5e-07 59.7 75 45.3
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 3.5e-07 59.7 236 30.1
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 6.0e-07 58.9 239 36.4
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 6.0e-07 58.9 261 36.4
Cc03_g00620 Coffea canephora HOM05D012194 ORTHO05D004310 7.8e-07 58.5 238 40.3
MSTRG.5144 Avicennia marina HOM05D020384 ORTHO05D004310 1.0e-06 58.2 186 33.9
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.0e-06 58.2 234 40.6
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 1.0e-06 58.2 234 30.8
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 1.3e-06 57.8 208 30.3
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 1.3e-06 57.8 234 38.5
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 1.3e-06 57.8 234 38.5
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.7e-06 57.4 210 31.4
Oeu038954.2 Olea europaea HOM05D016587 ORTHO05D004310 2.3e-06 57.0 195 35.9
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 2.3e-06 57.0 240 35.8
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 3.0e-06 56.6 78 46.2
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 3.0e-06 56.6 232 28.4
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 3.0e-06 56.6 228 31.1
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 3.9e-06 56.2 226 35.0
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 6.6e-06 55.5 234 38.0
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 6.6e-06 55.5 205 34.6
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 6.6e-06 55.5 72 44.4
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 8.6e-06 55.1 232 30.2


User provided reference genes

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