Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 2.0e-129 465.7 226 100.0
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 3.3e-79 298.9 215 70.2
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 4.3e-79 298.5 216 69.0
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 9.6e-79 297.4 215 70.2
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 2.1e-78 296.2 216 67.6
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 1.4e-77 293.5 213 69.0
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 1.8e-77 293.1 213 68.1
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 4.0e-77 292.0 216 67.6
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 3.4e-76 288.9 220 65.0
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 4.4e-76 288.5 224 68.8
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 5.8e-76 288.1 215 68.4
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 9.9e-76 287.3 204 70.1
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 2.2e-75 286.2 215 67.9
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 4.9e-75 285.0 219 65.3
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 8.4e-75 284.3 215 66.0
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 1.4e-74 283.5 213 67.1
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 1.4e-74 283.5 215 66.0
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 4.2e-74 282.0 189 74.6
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 4.2e-74 282.0 214 68.2
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 5.4e-74 281.6 213 66.2
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 7.1e-74 281.2 225 64.9
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 7.1e-74 281.2 215 64.2
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 7.1e-74 281.2 214 66.4
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 1.2e-73 280.4 214 65.4
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 1.2e-73 280.4 214 69.6
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 4.6e-73 278.5 213 69.0
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 6.0e-73 278.1 228 62.3
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 6.0e-73 278.1 221 63.3
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 6.0e-73 278.1 224 64.7
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 3.0e-72 275.8 226 65.5
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 3.0e-72 275.8 222 64.4
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 3.0e-72 275.8 216 65.7
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 3.9e-72 275.4 214 65.0
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 5.1e-72 275.0 203 67.5
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 5.1e-72 275.0 209 65.1
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 2.5e-71 272.7 209 64.6
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 2.5e-71 272.7 220 63.2
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 3.3e-71 272.3 209 64.6
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 4.3e-71 271.9 214 64.5
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 9.6e-71 270.8 213 66.2
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 9.6e-71 270.8 212 63.7
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 9.6e-71 270.8 215 66.0
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 6.2e-70 268.1 215 65.6
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 8.1e-70 267.7 221 63.3
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 1.1e-69 267.3 214 63.6
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 1.4e-69 266.9 222 64.4
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 1.4e-69 266.9 215 63.3
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 1.8e-69 266.5 212 65.6
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 3.1e-69 265.8 213 63.4
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 4.0e-69 265.4 213 64.3
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 6.9e-69 264.6 213 62.0
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 9.0e-69 264.2 219 61.6
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 9.0e-69 264.2 214 62.6
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 9.0e-69 264.2 189 70.9
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 9.0e-69 264.2 215 60.5
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 2.6e-68 262.7 215 61.9
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 2.6e-68 262.7 217 62.7
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 3.8e-67 258.8 213 62.9
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 4.9e-67 258.5 237 59.1
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 1.9e-66 256.5 216 62.5
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 1.9e-66 256.5 214 63.1
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 3.2e-66 255.8 227 60.8
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 7.1e-66 254.6 215 59.5
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 2.1e-65 253.1 218 59.6
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.1e-65 253.1 218 59.6
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 3.9e-64 248.8 214 60.7
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 1.1e-63 247.3 209 60.8
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 5.6e-63 245.0 212 59.9
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 7.4e-63 244.6 224 59.8
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 4.0e-61 238.8 214 54.2
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.7e-59 233.4 207 58.5
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 4.9e-59 231.9 241 52.3
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 2.5e-58 229.6 233 52.8
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 1.2e-57 227.3 210 56.7
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 1.8e-53 213.4 213 53.1
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 2.0e-52 209.9 212 53.8
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 3.5e-49 199.1 189 55.6
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 8.7e-48 194.5 216 49.1
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 3.7e-46 189.1 215 50.2
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 7.9e-41 171.4 213 45.5
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 1.8e-40 170.2 228 47.8
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.4e-37 160.6 204 45.1
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 5.3e-37 158.7 122 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 1.5e-36 157.1 146 54.1
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 4.2e-34 149.1 193 44.6
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 3.9e-32 142.5 220 40.5
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 7.7e-28 128.3 109 64.2
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 6.7e-24 115.2 79 65.8
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 3.7e-22 109.4 155 46.5
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 7.2e-18 95.1 77 66.2
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 3.0e-16 89.7 65 66.2
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 5.2e-16 89.0 119 47.1
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 1.5e-15 87.4 63 65.1
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 7.5e-15 85.1 82 53.7


User provided reference genes

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