Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A690T32 Lonicera japonica HOM05D003789 ORTHO05D004158 1.6e-97 359.4 178 100.0
Lj3A687T20 Lonicera japonica HOM05D003789 ORTHO05D004158 6.8e-96 354.0 178 98.3
Dinv29841 Davidia involucrata HOM05D003789 ORTHO05D004158 5.3e-56 221.5 178 68.0
Thecc.04G258900 Theobroma cacao HOM05D003789 ORTHO05D004158 3.2e-53 212.2 158 70.3
GSVIVG01027849001 Vitis vinifera HOM05D003789 ORTHO05D004158 5.4e-53 211.5 173 64.7
Prupe.1G042100 Prunus persica HOM05D003789 ORTHO05D004158 2.3e-51 206.1 176 63.6
Cc03_g05770 Coffea canephora HOM05D003789 ORTHO05D004158 1.5e-50 203.4 166 65.7
FAN22G1125 Fragaria x ananassa HOM05D003789 ORTHO05D004158 1.9e-50 203.0 173 65.3
FvH4_4g04000 Fragaria vesca HOM05D003789 ORTHO05D004158 2.5e-50 202.6 174 64.9
RcHm_v2.0_Chr4g0394251 Rosa chinensis HOM05D003789 ORTHO05D004158 3.3e-50 202.2 176 63.1
FAN12G3416 Fragaria x ananassa HOM05D003789 ORTHO05D004158 5.6e-50 201.4 174 64.4
Dinv27071 Davidia involucrata HOM05D003789 ORTHO05D004158 2.1e-49 199.5 134 73.1
Oeu059161.1 Olea europaea HOM05D003789 ORTHO05D004158 8.1e-49 197.6 172 60.5
Lj6A628T40 Lonicera japonica HOM05D003789 ORTHO05D004158 1.4e-48 196.8 139 73.4
Gohir.D02G046400 Gossypium hirsutum HOM05D003789 ORTHO05D004158 1.8e-48 196.4 167 64.1
Gorai.005G051200 Gossypium raimondii HOM05D003789 ORTHO05D004158 1.8e-48 196.4 167 64.1
Hund11906 Selenicereus undatus HOM05D003789 ORTHO05D004158 2.4e-48 196.1 159 63.5
CSS0032833 Camellia sinensis var. sinensis HOM05D003789 ORTHO05D004158 5.3e-48 194.9 140 72.1
Haze_11416 Corylus avellana HOM05D003789 ORTHO05D004158 5.3e-48 194.9 172 63.4
MSTRG.4146 Avicennia marina HOM05D003789 ORTHO05D004158 6.9e-48 194.5 169 62.1
Gohir.A02G040800 Gossypium hirsutum HOM05D003789 ORTHO05D004158 6.9e-48 194.5 167 63.5
Cfa014741 Carpinus fangiana HOM05D003789 ORTHO05D004158 4.5e-47 191.8 172 61.6
Sc13g0005850 Simmondsia chinensis HOM05D003789 ORTHO05D004158 4.5e-47 191.8 160 63.8
Ah.13g072580 Amaranthus hybridus HOM05D003789 ORTHO05D004158 7.6e-47 191.0 158 60.8
Potri.010G069400 Populus trichocarpa HOM05D003789 ORTHO05D004158 2.2e-46 189.5 170 61.8
MD13G1216300 Malus domestica HOM05D003789 ORTHO05D004158 2.9e-46 189.1 178 57.9
Potri.008G169000 Populus trichocarpa HOM05D003789 ORTHO05D004158 4.9e-46 188.3 163 64.4
EL10Ac3g04983 Beta vulgaris HOM05D003789 ORTHO05D004158 6.4e-46 188.0 158 59.5
TAR362G0255 Trochodendron aralioides HOM05D003789 ORTHO05D004158 6.4e-46 188.0 169 61.5
TAR633G1733 Trochodendron aralioides HOM05D003789 ORTHO05D004158 1.1e-45 187.2 169 61.5
QL06p019201 Quercus lobata HOM05D003789 ORTHO05D004158 1.9e-45 186.4 156 64.1
Duzib151G1033 Durio zibethinus HOM05D003789 ORTHO05D004158 2.4e-45 186.0 162 63.6
Actinidia20820 Actinidia chinensis HOM05D003789 ORTHO05D004158 5.5e-45 184.9 140 70.7
Sabra08G0128800 Salix brachista HOM05D003789 ORTHO05D004158 1.6e-44 183.3 165 61.8
Sabra10G0037700 Salix brachista HOM05D003789 ORTHO05D004158 2.7e-44 182.6 156 63.5
vmacro15457 Vaccinium macrocarpon HOM05D003789 ORTHO05D004158 7.9e-44 181.0 143 69.9
Actinidia35800 Actinidia chinensis HOM05D003789 ORTHO05D004158 1.0e-43 180.6 139 69.1
AUR62002162 Chenopodium quinoa HOM05D003789 ORTHO05D004158 2.3e-43 179.5 150 63.3
Eucgr.H03019 Eucalyptus grandis HOM05D003789 ORTHO05D004158 3.0e-43 179.1 170 56.5
Nn3g19718 Nelumbo nucifera HOM05D003789 ORTHO05D004158 8.7e-43 177.6 162 58.0
AUR62015547 Chenopodium quinoa HOM05D003789 ORTHO05D004158 1.1e-42 177.2 151 62.3
CiPaw.02G109400 Carya illinoinensis HOM05D003789 ORTHO05D004158 1.5e-42 176.8 134 67.2
Peaxi162Scf00392g00731 Petunia axillaris HOM05D003789 ORTHO05D004158 2.5e-42 176.0 167 56.9
Cpa.g.sc380.1 Carica papaya HOM05D003789 ORTHO05D004158 1.3e-41 173.7 140 66.4
Hund03054 Selenicereus undatus HOM05D003789 ORTHO05D004158 2.8e-41 172.6 139 63.3
vmacro08512 Vaccinium macrocarpon HOM05D003789 ORTHO05D004158 2.8e-41 172.6 136 68.4
PGSC0003DMG400017165 Solanum tuberosum HOM05D003789 ORTHO05D004158 3.7e-41 172.2 168 56.5
FAN17G0027 Fragaria x ananassa HOM05D003789 ORTHO05D004158 4.8e-41 171.8 142 65.5
COL.COLO4_15914 Corchorus olitorius HOM05D003789 ORTHO05D004158 8.2e-41 171.0 151 61.6
Manes.03G162300 Manihot esculenta HOM05D003789 ORTHO05D004158 1.1e-40 170.6 160 56.9
Rhsim04G0176400 Rhododendron simsii HOM05D003789 ORTHO05D004158 3.1e-40 169.1 142 64.1
Manes.15G043000 Manihot esculenta HOM05D003789 ORTHO05D004158 5.8e-39 164.9 177 54.8
Actinidia11355 Actinidia chinensis HOM05D003789 ORTHO05D004158 7.6e-39 164.5 136 66.2
Solyc09g090320.2 Solanum lycopersicum HOM05D003789 ORTHO05D004158 7.6e-39 164.5 168 54.8
Rhsim02G0041400 Rhododendron simsii HOM05D003789 ORTHO05D004158 8.4e-38 161.0 143 64.3
Prupe.4G184200 Prunus persica HOM05D003789 ORTHO05D004158 1.4e-37 160.2 127 63.8
PGR004G1142 Punica granatum HOM05D003789 ORTHO05D004158 1.9e-37 159.8 184 51.6
Nitab4.5_0003268g0030 Nicotiana tabacum HOM05D003789 ORTHO05D004158 3.2e-37 159.1 130 64.6
SGA_v2.0_scaffold31G12661 Striga asiatica HOM05D003789 ORTHO05D004158 7.1e-37 157.9 133 66.2
Aqoxy5G00187 Aquilegia oxysepala HOM05D003789 ORTHO05D004158 7.9e-36 154.5 150 60.7
Nitab4.5_0004509g0030 Nicotiana tabacum HOM05D003789 ORTHO05D004158 1.8e-35 153.3 130 63.1
MD16G1221700 Malus domestica HOM05D003789 ORTHO05D004158 2.3e-35 152.9 144 58.3
Sopen09g033220 Solanum pennellii HOM05D003789 ORTHO05D004158 3.9e-35 152.1 138 58.7
Gohir.A10G109600 Gossypium hirsutum HOM05D003789 ORTHO05D004158 8.7e-35 151.0 153 58.2
Gohir.D10G157500 Gossypium hirsutum HOM05D003789 ORTHO05D004158 1.1e-34 150.6 121 66.1
CARHR220530 Cardamine hirsuta HOM05D003789 ORTHO05D004158 1.9e-34 149.8 169 53.3
Peaxi162Scf00319g00815 Petunia axillaris HOM05D003789 ORTHO05D004158 1.9e-34 149.8 152 56.6
Gorai.011G176900 Gossypium raimondii HOM05D003789 ORTHO05D004158 1.3e-33 147.1 153 57.5
AT4G14330 Arabidopsis thaliana HOM05D003789 ORTHO05D004158 2.8e-33 146.0 167 49.7
Carub.0007s2795 Capsella rubella HOM05D003789 ORTHO05D004158 2.8e-33 146.0 167 51.5
unitig_746.g26888 Utricularia gibba HOM05D003789 ORTHO05D004158 1.1e-32 144.1 170 50.0
Aa31LG9G3030 Aethionema arabicum HOM05D003789 ORTHO05D004158 6.9e-32 141.4 152 52.6
AL7G41920 Arabidopsis lyrata HOM05D003789 ORTHO05D004158 6.9e-32 141.4 167 50.9
BcaB02g08616 Brassica carinata HOM05D003789 ORTHO05D004158 1.2e-31 140.6 169 52.1
PSO832G2621 Papaver somniferum HOM05D003789 ORTHO05D004158 1.5e-31 140.2 162 51.9
Aa31LG8G9880 Aethionema arabicum HOM05D003789 ORTHO05D004158 3.4e-31 139.0 168 50.0
CAN.G638.43 Capsicum annuum HOM05D003789 ORTHO05D004158 4.5e-31 138.7 138 59.4
Sp7g12360 Schrenkiella parvula HOM05D003789 ORTHO05D004158 1.3e-30 137.1 162 50.0
PSO210G3313 Papaver somniferum HOM05D003789 ORTHO05D004158 1.7e-30 136.7 162 51.2
BcaC02g09326 Brassica carinata HOM05D003789 ORTHO05D004158 2.2e-30 136.3 170 51.2
C04p41390 Brassica napus HOM05D003789 ORTHO05D004158 2.2e-30 136.3 170 51.2
BolC4t25718H Brassica oleracea HOM05D003789 ORTHO05D004158 5.0e-30 135.2 170 50.6
A04p07720 Brassica napus HOM05D003789 ORTHO05D004158 1.4e-29 133.7 172 51.2
BraA04t16464Z Brassica rapa HOM05D003789 ORTHO05D004158 1.4e-29 133.7 172 51.2
Thhalv10024385m.g Eutrema salsugineum HOM05D003789 ORTHO05D004158 2.5e-29 132.9 168 50.0
ATR0736G052 Amborella trichopoda HOM05D003789 ORTHO05D004158 3.6e-28 129.0 136 52.9
SGA_v2.0_scaffold43G16218 Striga asiatica HOM05D003789 ORTHO05D004158 8.8e-27 124.4 176 45.5
CDE04G3651 Ceratophyllum demersum HOM05D003789 ORTHO05D004158 2.5e-26 122.9 150 48.7
HPP92_012885 Vanilla planifolia HOM05D003789 ORTHO05D004158 3.3e-26 122.5 128 52.3
ECA248G2783 Erigeron canadensis HOM05D003789 ORTHO05D004158 9.7e-26 120.9 130 57.7
Os02g0810200 Oryza sativa ssp. japonica HOM05D003789 ORTHO05D004158 3.7e-25 119.0 134 50.7
Zm00001eb258470 Zea mays HOM05D003789 ORTHO05D004158 6.5e-22 108.2 139 46.0
SEGI_25573 Sequoiadendron giganteum HOM05D003789 ORTHO05D004158 6.1e-20 101.7 142 41.5
Zm00001eb191700 Zea mays HOM05D003789 ORTHO05D004158 1.4e-19 100.5 152 42.1
AagrBONN_evm.TU.Sc2ySwM_117.643 Anthoceros agrestis HOM05D003789 ORTHO05D004158 2.3e-19 99.8 112 49.1
Atru.chr4.2006 Acer truncatum HOM05D003789 ORTHO05D004158 3.9e-19 99.0 76 69.7
CiPaw.01G181800 Carya illinoinensis HOM05D003789 ORTHO05D004158 7.4e-18 94.7 75 66.7
CDE12G0940 Ceratophyllum demersum HOM05D003789 ORTHO05D004158 2.2e-17 93.2 109 50.5
Mapoly0051s0002 Marchantia polymorpha HOM05D003789 ORTHO05D004158 1.7e-14 83.6 148 37.2
Oeu002942.1 Olea europaea HOM05D003789 ORTHO05D004158 5.0e-14 82.0 148 36.5
SEGI_24565 Sequoiadendron giganteum HOM05D003789 ORTHO05D004158 1.4e-13 80.5 115 40.0
SEGI_13239 Sequoiadendron giganteum HOM05D003789 ORTHO05D004158 9.4e-13 77.8 88 50.0
Pp3c14_20330 Physcomitrium patens HOM05D003789 ORTHO05D004158 1.6e-12 77.0 133 37.6
SMO134G0266 Selaginella moellendorffii HOM05D003789 ORTHO05D004158 8.0e-12 74.7 119 40.3
SMO137G0194 Selaginella moellendorffii HOM05D003789 ORTHO05D004158 8.0e-12 74.7 119 39.5


User provided reference genes

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