Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A423G37 Lonicera japonica HOM05D012321 ORTHO05D012493 1.3e-67 259.6 137 100.0
Lj3A423G38 Lonicera japonica HOM05D012321 ORTHO05D012493 2.5e-50 202.2 134 81.3
Lj3A423G34 Lonicera japonica HOM05D012321 ORTHO05D012493 1.0e-38 163.7 105 81.9
Lj3A423G35 Lonicera japonica HOM05D012321 ORTHO05D012493 1.1e-34 150.2 99 77.8
Lj3A423G36 Lonicera japonica HOM05D012321 ORTHO05D012493 3.1e-32 142.1 94 80.9
Lj4P485T6 Lonicera japonica HOM05D012321 ORTHO05D012493 8.5e-14 80.9 82 61.0
Lj4A129T110 Lonicera japonica HOM05D012321 ORTHO05D012493 1.9e-13 79.7 126 42.9
HanXRQChr01g0018881 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-12 76.3 96 46.9
Lj4P488T6 Lonicera japonica HOM05D012321 ORTHO05D012493 3.6e-12 75.5 70 64.3
Lj1P486T7 Lonicera japonica HOM05D012321 ORTHO05D012493 6.1e-12 74.7 82 57.3
HanXRQChr12g0373691 Helianthus annuus HOM05D000312 ORTHO05D000221 1.8e-11 73.2 90 46.7
Dinv15562 Davidia involucrata HOM05D000312 ORTHO05D000221 4.0e-11 72.0 104 41.3
Lj1P491T19 Lonicera japonica HOM05D012321 ORTHO05D012493 4.0e-11 72.0 82 57.3
PGSC0003DMG400002954 Solanum tuberosum HOM05D000312 ORTHO05D012493 5.7e-10 68.2 88 45.5
Lj1P488T10 Lonicera japonica HOM05D012321 ORTHO05D012493 7.5e-10 67.8 82 56.1
Lj1P505T14 Lonicera japonica HOM05D012321 ORTHO05D012493 9.8e-10 67.4 56 64.3
Lju3616P0T7 Lonicera japonica HOM05D012321 ORTHO05D012493 1.7e-09 66.6 56 62.5
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 2.2e-09 66.2 84 48.8
PGSC0003DMG400047124 Solanum tuberosum HOM05D000312 ORTHO05D000221 2.2e-09 66.2 87 44.8
HanXRQChr01g0019091 Helianthus annuus HOM05D000312 ORTHO05D000221 2.8e-09 65.9 96 42.7
Lsat_1_v5_gn_1_81061 Lactuca sativa HOM05D000312 ORTHO05D012493 3.7e-09 65.5 85 47.1
Lsat_1_v5_gn_1_80360 Lactuca sativa HOM05D000312 ORTHO05D000221 8.3e-09 64.3 132 36.4
Peaxi162Scf00015g00635 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-08 63.5 94 45.7
Nitab4.5_0004688g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.4e-08 62.8 85 47.1
Nitab4.5_0006592g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.4e-08 62.8 57 61.4
CSS0007927 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.1e-08 62.4 84 45.2
CAN.G1163.6 Capsicum annuum HOM05D000312 ORTHO05D000221 3.1e-08 62.4 86 50.0
Cc11_g11160 Coffea canephora HOM05D000312 ORTHO05D000221 3.1e-08 62.4 105 41.0
Sopen04g013290 Solanum pennellii HOM05D000312 ORTHO05D000221 3.1e-08 62.4 87 42.5
HanXRQChr01g0019081 Helianthus annuus HOM05D000312 ORTHO05D000221 4.1e-08 62.0 89 44.9
Lsat_1_v5_gn_1_81421 Lactuca sativa HOM05D000312 ORTHO05D012493 4.1e-08 62.0 85 45.9
Peaxi162Scf00003g00813 Petunia axillaris HOM05D000312 ORTHO05D000221 9.1e-08 60.8 99 40.4
Sopen04g013320 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-08 60.8 87 43.7
CSS0046143 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.2e-07 60.5 96 39.6
Lsat_1_v5_gn_1_81001 Lactuca sativa HOM05D000312 ORTHO05D000221 2.0e-07 59.7 86 45.3
Lsat_1_v5_gn_1_81361 Lactuca sativa HOM05D000312 ORTHO05D000221 2.7e-07 59.3 84 46.4
Nitab4.5_0000149g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.5e-07 58.5 120 35.0
Lsat_1_v5_gn_1_75200 Lactuca sativa HOM05D000312 ORTHO05D000221 5.9e-07 58.2 70 52.9
HanXRQChr01g0017111 Helianthus annuus HOM05D000312 ORTHO05D000221 1.0e-06 57.4 89 42.7
Nitab4.5_0012426g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.0e-06 57.4 88 43.2
Hma1.2p1_0148F.1_g066000 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.3e-06 57.0 96 40.6
Nitab4.5_0004294g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-06 56.6 102 40.2
Lsat_1_v5_gn_1_81541 Lactuca sativa HOM05D000312 ORTHO05D000221 2.3e-06 56.2 75 45.3
Lsat_1_v5_gn_1_81521 Lactuca sativa HOM05D000312 ORTHO05D000221 2.9e-06 55.8 106 42.5
HanXRQChr01g0017811 Helianthus annuus HOM05D000312 ORTHO05D000221 3.8e-06 55.5 87 44.8
Peaxi162Scf00003g00089 Petunia axillaris HOM05D000312 ORTHO05D000221 3.8e-06 55.5 60 51.7
Peaxi162Scf00026g01914 Petunia axillaris HOM05D000312 ORTHO05D000221 3.8e-06 55.5 130 33.1
Solyc11g011230.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 5.0e-06 55.1 93 41.9
Dinv16565 Davidia involucrata HOM05D000312 ORTHO05D000221 6.6e-06 54.7 96 41.7
HanXRQChr01g0019051 Helianthus annuus HOM05D000312 ORTHO05D000221 8.6e-06 54.3 74 45.9
Peaxi162Scf00053g00810 Petunia axillaris HOM05D000312 ORTHO05D000221 8.6e-06 54.3 89 40.4


User provided reference genes

Program Settings