Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 6.4e-131 470.7 229 100.0
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 4.2e-122 441.4 229 90.0
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 9.3e-122 440.3 229 90.8
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 2.7e-121 438.7 229 92.6
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.7e-120 436.0 229 91.3
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.9e-120 434.9 229 91.3
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.9e-120 434.9 229 91.3
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 6.6e-120 434.1 229 91.3
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 8.7e-120 433.7 228 92.1
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.1e-119 433.3 229 89.1
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 2.5e-119 432.2 229 91.3
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 4.3e-119 431.4 229 89.5
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 4.3e-119 431.4 229 90.4
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 5.6e-119 431.0 229 91.3
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 2.8e-118 428.7 229 89.1
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 3.6e-118 428.3 229 89.5
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 8.1e-118 427.2 229 87.8
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.1e-117 426.8 229 88.6
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.4e-117 426.4 229 88.6
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.4e-117 426.4 229 88.6
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.8e-117 426.0 229 89.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.8e-117 426.0 229 87.3
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.8e-117 426.0 229 88.6
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.4e-117 425.6 229 88.6
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 2.4e-117 425.6 227 89.0
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.4e-117 425.6 229 89.1
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.1e-117 425.2 229 88.2
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 4.0e-117 424.9 229 90.0
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 4.0e-117 424.9 229 88.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 4.0e-117 424.9 229 88.2
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 5.3e-117 424.5 229 86.5
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 6.9e-117 424.1 229 88.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 9.0e-117 423.7 229 88.6
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 9.0e-117 423.7 229 88.6
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.2e-116 423.3 229 88.6
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.0e-116 422.5 229 88.2
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.4e-116 421.8 229 85.6
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.4e-116 421.8 229 86.5
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 3.4e-116 421.8 229 87.8
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 4.5e-116 421.4 229 87.8
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 7.6e-116 420.6 229 87.3
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.2e-115 419.1 229 86.9
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 2.2e-115 419.1 229 87.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 2.9e-115 418.7 229 87.8
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 2.9e-115 418.7 229 88.6
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.8e-115 418.3 229 85.2
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 3.8e-115 418.3 229 86.0
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 4.9e-115 417.9 229 85.6
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 6.4e-115 417.5 229 86.9
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 6.4e-115 417.5 229 86.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 6.4e-115 417.5 229 86.9
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 6.4e-115 417.5 229 87.8
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 8.4e-115 417.2 229 85.6
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 8.4e-115 417.2 229 86.0
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.1e-114 416.8 230 86.5
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.1e-114 416.8 229 86.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.4e-114 416.4 229 86.0
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 2.4e-114 415.6 229 85.6
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.2e-114 414.8 229 85.6
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 4.2e-114 414.8 229 85.2
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.4e-114 414.5 229 87.3
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 5.4e-114 414.5 229 85.6
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 7.1e-114 414.1 229 84.7
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 9.3e-114 413.7 229 84.7
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.2e-113 413.3 229 86.5
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 2.1e-113 412.5 229 85.6
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.7e-113 412.1 229 84.7
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.6e-113 411.4 229 83.8
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 6.0e-113 411.0 229 83.4
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.0e-113 411.0 229 83.4
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 6.0e-113 411.0 229 83.8
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.8e-112 409.5 229 84.3
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.3e-112 409.1 229 83.8
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 3.9e-112 408.3 216 89.4
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 3.9e-112 408.3 229 82.1
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 8.7e-112 407.1 229 85.2
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 8.7e-112 407.1 222 87.8
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 1.1e-111 406.8 229 82.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 1.1e-111 406.8 229 84.3
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.1e-111 406.8 229 83.8
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.9e-111 406.0 229 83.0
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.9e-111 406.0 229 82.5
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 7.4e-111 404.1 229 82.5
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 7.4e-111 404.1 230 83.0
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.6e-110 402.9 229 83.4
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.6e-110 402.9 229 81.7
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.6e-110 402.9 229 81.7
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.8e-110 402.1 229 82.1
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.8e-110 401.4 229 81.7
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 4.8e-110 401.4 229 82.5
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 6.2e-110 401.0 229 80.8
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 8.1e-110 400.6 229 80.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.1e-109 400.2 229 83.4
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.4e-109 399.8 229 81.7
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 2.6e-108 395.6 229 79.9
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 4.6e-105 384.8 182 100.0
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 7.9e-105 384.0 199 89.9
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.8e-101 372.9 229 74.7
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.0e-99 367.1 229 73.4
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.2e-99 365.9 222 73.9
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.2e-98 361.7 229 73.4
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.7e-97 359.0 229 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 4.6e-97 358.2 229 71.6
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 6.0e-97 357.8 229 75.1
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 6.3e-94 347.8 229 70.3
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.9e-91 339.0 190 83.2
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 3.4e-84 315.5 229 71.6
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.0e-83 313.9 215 68.4
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 5.9e-76 288.1 230 61.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 2.1e-65 253.1 165 74.5
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 2.2e-54 216.5 122 86.1
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.6e-52 210.3 126 81.7
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 2.7e-52 209.5 118 84.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 7.7e-52 208.0 119 84.9
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 2.8e-49 199.5 122 78.7
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 3.0e-48 196.1 229 51.1
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.0e-35 152.9 196 45.4
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 2.1e-20 103.6 94 56.4
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 8.9e-16 88.2 63 65.1
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.5e-10 70.1 38 76.3


User provided reference genes

Program Settings