Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 2.8e-108 395.2 188 100.0
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 5.0e-105 384.4 182 100.0
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 6.9e-99 364.0 182 92.3
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.5e-98 362.8 182 91.2
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 7.7e-98 360.5 188 90.4
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 7.7e-98 360.5 188 90.4
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.3e-97 359.8 182 92.9
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 2.2e-97 359.0 182 92.3
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 6.5e-97 357.5 182 89.0
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.4e-96 356.3 182 91.2
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 3.2e-96 355.1 181 91.7
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.2e-96 354.8 188 89.9
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 5.5e-96 354.4 182 88.5
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.2e-95 353.2 182 90.7
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.2e-95 353.2 182 87.9
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.2e-95 353.2 182 90.7
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 3.6e-95 351.7 182 89.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 3.6e-95 351.7 182 89.0
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 3.6e-95 351.7 182 89.6
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 4.6e-95 351.3 182 87.4
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 4.6e-95 351.3 182 89.0
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 7.9e-95 350.5 182 88.5
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.4e-94 349.7 182 89.0
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.4e-94 349.7 182 89.0
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 1.8e-94 349.4 182 89.0
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 1.8e-94 349.4 182 87.9
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.0e-94 348.6 182 86.3
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.1e-94 347.8 182 89.0
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 5.1e-94 347.8 182 87.9
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 5.1e-94 347.8 182 86.8
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 5.1e-94 347.8 182 88.5
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 6.7e-94 347.4 182 88.5
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 6.7e-94 347.4 182 87.9
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 8.8e-94 347.1 182 87.9
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.1e-93 346.7 182 89.6
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.1e-93 346.7 182 86.8
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.1e-93 346.7 182 88.5
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 1.1e-93 346.7 182 88.5
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.0e-93 345.9 182 87.4
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 2.0e-93 345.9 182 86.8
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.0e-93 345.9 182 87.4
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.0e-93 345.9 182 87.9
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.6e-93 345.5 182 86.8
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.6e-93 345.5 182 86.8
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.6e-93 345.5 182 87.4
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 2.6e-93 345.5 182 87.4
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.3e-93 345.1 182 85.7
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.3e-93 345.1 182 86.8
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 3.3e-93 345.1 182 89.0
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 4.4e-93 344.7 182 85.2
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 4.4e-93 344.7 182 86.8
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 4.4e-93 344.7 182 86.3
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 4.4e-93 344.7 182 87.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.7e-93 344.4 182 86.3
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 7.4e-93 344.0 182 85.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 7.4e-93 344.0 182 86.3
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 7.4e-93 344.0 182 86.3
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 9.7e-93 343.6 182 87.9
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.3e-92 343.2 182 87.4
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.3e-92 343.2 182 87.4
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.7e-92 342.8 180 87.8
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.7e-92 342.8 188 86.2
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.8e-92 342.0 182 84.1
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.8e-92 342.0 182 84.6
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.8e-92 342.0 182 86.3
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 3.7e-92 341.7 182 86.8
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 3.7e-92 341.7 182 85.7
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.8e-92 341.3 182 85.2
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 4.8e-92 341.3 182 85.7
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 6.3e-92 340.9 182 86.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 6.3e-92 340.9 182 84.6
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 8.2e-92 340.5 182 87.4
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.1e-91 340.1 182 86.8
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.1e-91 340.1 182 84.6
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.4e-91 339.0 182 85.2
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 2.4e-91 339.0 182 84.6
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 4.1e-91 338.2 183 85.2
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 5.3e-91 337.8 182 85.2
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 6.9e-91 337.4 182 85.7
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.5e-90 336.3 182 84.6
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.4e-90 335.1 182 84.1
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 2.9e-89 332.0 188 82.4
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 5.0e-89 331.3 182 81.3
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.1e-88 330.1 183 82.5
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 3.2e-88 328.6 182 81.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 3.2e-88 328.6 182 80.8
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 3.2e-88 328.6 182 80.8
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 4.2e-88 328.2 182 81.3
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 4.2e-88 328.2 175 86.9
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 5.5e-88 327.8 182 81.3
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 5.5e-88 327.8 182 80.8
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.2e-87 326.6 182 79.7
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.2e-87 326.6 182 79.7
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.6e-87 326.2 182 83.0
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 2.7e-87 325.5 182 81.3
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.0e-86 323.6 182 81.3
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.8e-83 312.8 182 77.5
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 8.5e-81 303.9 182 74.2
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 3.2e-80 302.0 181 72.4
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 4.2e-80 301.6 152 88.8
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.7e-79 298.1 182 72.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.0e-78 297.0 182 72.5
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 2.3e-78 295.8 182 72.0
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 5.7e-77 291.2 161 80.7
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.1e-75 285.4 182 70.9
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.6e-71 271.9 143 85.3
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 9.8e-69 263.8 137 86.9
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.7e-68 263.1 182 67.0
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 4.9e-60 235.0 189 60.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 5.6e-48 194.9 100 87.0
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 6.8e-38 161.4 104 74.0
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.3e-32 142.5 113 60.2
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 1.6e-31 140.2 75 85.3
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 2.8e-31 139.4 78 83.3
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.4e-30 137.1 71 87.3
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.8e-30 136.7 79 79.7
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 3.4e-29 132.5 81 74.1
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 4.9e-20 102.1 59 72.9
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 7.3e-16 88.2 63 65.1
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.1e-10 70.1 38 76.3


User provided reference genes

Program Settings