Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A31T23 Lonicera japonica HOM05D000455 ORTHO05D010913 5.8e-132 474.2 229 100.0
Lj3A30T36 Lonicera japonica HOM05D000455 ORTHO05D010913 9.0e-117 423.7 230 88.3
Lj3A57G24 Lonicera japonica HOM05D000455 ORTHO05D010913 2.6e-100 369.0 225 78.7
Lj3A52T15 Lonicera japonica HOM05D000455 ORTHO05D010913 5.8e-100 367.9 226 79.2
Lj3A56G20 Lonicera japonica HOM05D000455 ORTHO05D010913 5.7e-95 351.3 179 92.2
Lj3A60G10 Lonicera japonica HOM05D000455 ORTHO05D010913 4.8e-86 321.6 175 88.0
Lj3A57T25 Lonicera japonica HOM05D000455 ORTHO05D010913 1.3e-62 243.8 212 60.8
Lj3A31T20 Lonicera japonica HOM05D000455 ORTHO05D010913 7.2e-58 228.0 225 54.2
Lj3C41G0 Lonicera japonica HOM05D000455 ORTHO05D010913 3.6e-57 225.7 223 52.5
Lj3P63T18 Lonicera japonica HOM05D000455 ORTHO05D010913 6.1e-57 224.9 234 53.0
Lj3C66T0 Lonicera japonica HOM05D000455 ORTHO05D010913 2.9e-51 206.1 213 54.0
Lj3A30G30 Lonicera japonica HOM05D000455 ORTHO05D010913 1.5e-50 203.8 193 56.5
Lj3C59T0 Lonicera japonica HOM05D000455 ORTHO05D010913 1.6e-49 200.3 218 51.8
Lj3C60G0 Lonicera japonica HOM05D000455 ORTHO05D010913 6.8e-48 194.9 215 51.6
Lj3A52G17 Lonicera japonica HOM05D000455 ORTHO05D010913 8.9e-48 194.5 201 52.7
Lj3C20G5 Lonicera japonica HOM05D000455 ORTHO05D000462 2.8e-46 189.5 184 54.3
Lj3A53T23 Lonicera japonica HOM05D000455 ORTHO05D010913 3.3e-42 176.0 226 45.1
Lj3A58T12 Lonicera japonica HOM05D000455 ORTHO05D010913 7.3e-42 174.9 180 55.0
Lj3A55G12 Lonicera japonica HOM05D000455 ORTHO05D010913 5.2e-40 168.7 225 44.9
Lj3C58T3 Lonicera japonica HOM05D000455 ORTHO05D010913 6.8e-40 168.3 212 48.6
Lj3C62T11 Lonicera japonica HOM05D000455 ORTHO05D010913 2.0e-39 166.8 216 48.1
Lj3A31T21 Lonicera japonica HOM05D000455 ORTHO05D010913 4.1e-37 159.1 224 42.9
Lj3A54G25 Lonicera japonica HOM05D000455 ORTHO05D010913 4.0e-32 142.5 160 51.2
Lj8C207G8 Lonicera japonica HOM05D000455 ORTHO05D010913 4.1e-29 132.5 174 46.0
Lj3C57G7 Lonicera japonica HOM05D000455 ORTHO05D010913 6.0e-28 128.6 146 49.3
Lj3C53T8 Lonicera japonica HOM05D000455 ORTHO05D010913 1.3e-27 127.5 204 39.7
Lj8C207T2 Lonicera japonica HOM05D000455 ORTHO05D000434 3.6e-17 92.8 221 31.2
Dinv24847 Davidia involucrata HOM05D000455 ORTHO05D000434 4.7e-17 92.4 208 32.2
Dinv24846 Davidia involucrata HOM05D000455 ORTHO05D000434 1.4e-13 80.9 132 36.4
Dinv13089 Davidia involucrata HOM05D000455 ORTHO05D000434 2.7e-12 76.6 146 34.2
Lj8A565T13 Lonicera japonica HOM05D000455 ORTHO05D010913 7.8e-12 75.1 52 67.3
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 1.3e-11 74.3 132 34.1
Lj8A206T33 Lonicera japonica HOM05D000455 ORTHO05D000434 8.7e-11 71.6 146 34.9
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 2.5e-10 70.1 199 27.6
ECA232G1721 Erigeron canadensis HOM05D000455 ORTHO05D011724 1.6e-09 67.4 253 26.1
Rhsim02G0245200 Rhododendron simsii HOM05D000455 ORTHO05D000434 4.8e-09 65.9 140 37.1
Dinv10484 Davidia involucrata HOM05D000455 ORTHO05D000434 8.1e-09 65.1 199 27.6
CSS0019790 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.4e-08 64.3 214 29.0
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 1.4e-08 64.3 206 32.0
Hma1.2p1_1094F.1_g256500 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.4e-08 64.3 129 33.3
Peaxi162Scf00391g00432 Petunia axillaris HOM05D000455 ORTHO05D012328 1.4e-08 64.3 134 33.6
vmacro11342 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 2.4e-08 63.5 130 36.9
Peaxi162Scf00074g00543 Petunia axillaris HOM05D000455 ORTHO05D000434 4.0e-08 62.8 147 27.9
vmacro18354 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 5.3e-08 62.4 130 36.9
CSS0008760 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.0e-08 61.6 155 28.4
Dinv10486 Davidia involucrata HOM05D000455 ORTHO05D000434 9.0e-08 61.6 128 37.5
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 1.2e-07 61.2 123 34.1
ECA246G0977 Erigeron canadensis HOM05D000455 ORTHO05D000434 1.2e-07 61.2 145 31.0
Rhsim04G0087200 Rhododendron simsii HOM05D000455 ORTHO05D000434 2.0e-07 60.5 140 29.3
CSS0005754 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D012328 2.6e-07 60.1 200 28.5
CSS0010178 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.8e-07 58.9 198 28.3
Rhsim02G0245800 Rhododendron simsii HOM05D000455 ORTHO05D023106 5.8e-07 58.9 129 34.9
THA.LOC104809819 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 5.8e-07 58.9 137 30.7
Carub.0001s2011 Capsella rubella HOM05D000455 ORTHO05D000434 7.6e-07 58.5 147 28.6
THA.LOC104811470 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 7.6e-07 58.5 166 25.9
Gohir.D05G182200 Gossypium hirsutum HOM05D000455 ORTHO05D000434 9.9e-07 58.2 151 28.5
Gorai.009G187500 Gossypium raimondii HOM05D000455 ORTHO05D000434 9.9e-07 58.2 151 28.5
Nn5g30967 Nelumbo nucifera HOM05D000455 ORTHO05D000434 9.9e-07 58.2 152 30.3
A07p15560 Brassica napus HOM05D000455 ORTHO05D000434 1.3e-06 57.8 131 28.2
Thhalv10018128m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 1.3e-06 57.8 174 25.3
BcaC06g34826 Brassica carinata HOM05D000455 ORTHO05D000434 1.7e-06 57.4 131 28.2
C07p22920 Brassica napus HOM05D000455 ORTHO05D000434 1.7e-06 57.4 131 28.2
BolC7t42831H Brassica oleracea HOM05D000455 ORTHO05D000434 1.7e-06 57.4 131 28.2
BraA07t29295Z Brassica rapa HOM05D000455 ORTHO05D000434 1.7e-06 57.4 131 28.2
CSS0009186 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D012328 1.7e-06 57.4 201 27.9
Sopen08g030990 Solanum pennellii HOM05D000455 ORTHO05D000434 1.7e-06 57.4 157 29.3
CSS0029946 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.2e-06 57.0 205 26.8
PGSC0003DMG401012256 Solanum tuberosum HOM05D000455 ORTHO05D000434 2.2e-06 57.0 157 29.3
BcaB03g14309 Brassica carinata HOM05D000455 ORTHO05D000434 2.9e-06 56.6 131 28.2
AL1G33600 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 3.8e-06 56.2 125 29.6
MSTRG.21454 Avicennia marina HOM05D000455 ORTHO05D000434 3.8e-06 56.2 146 30.1
Potri.005G251700 Populus trichocarpa HOM05D000455 ORTHO05D000434 3.8e-06 56.2 128 32.8
AT1G20640 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 4.9e-06 55.8 145 28.3
CAN.G963.6 Capsicum annuum HOM05D000455 ORTHO05D000434 4.9e-06 55.8 161 28.6
Aa31LG7G4860 Aethionema arabicum HOM05D000455 ORTHO05D000434 6.4e-06 55.5 171 26.9
CSS0009880 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.4e-06 55.5 151 31.1
CSS0039323 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.4e-06 55.5 149 28.2
CSS0046598 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.4e-06 55.5 141 29.8
CARHR021100 Cardamine hirsuta HOM05D000455 ORTHO05D000434 6.4e-06 55.5 175 27.4
Dinv01855 Davidia involucrata HOM05D000455 ORTHO05D000434 6.4e-06 55.5 134 37.3
Gohir.A05G179000 Gossypium hirsutum HOM05D000455 ORTHO05D000434 8.4e-06 55.1 130 30.0


User provided reference genes

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