Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.0e-117 425.2 222 100.0
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 7.4e-100 367.5 192 99.5
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.4e-74 283.5 192 75.0
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 5.3e-74 281.6 187 75.4
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 7.0e-74 281.2 192 76.0
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 3.5e-73 278.9 191 74.9
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 4.5e-73 278.5 186 75.3
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 4.5e-73 278.5 189 74.6
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 4.5e-73 278.5 191 74.3
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 5.9e-73 278.1 186 78.0
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 7.7e-73 277.7 184 76.6
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 7.7e-73 277.7 181 79.0
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 1.0e-72 277.3 188 75.0
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.7e-72 276.6 186 76.3
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 5.0e-72 275.0 205 69.8
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 8.5e-72 274.2 190 72.6
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.1e-71 273.9 185 74.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 1.9e-71 273.1 185 75.7
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.5e-71 272.7 189 75.1
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 3.2e-71 272.3 187 76.5
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 4.2e-71 271.9 187 76.5
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 4.2e-71 271.9 183 76.5
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 4.2e-71 271.9 185 75.1
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 7.2e-71 271.2 183 76.5
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 9.4e-71 270.8 190 72.1
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 9.4e-71 270.8 188 73.9
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 9.4e-71 270.8 195 74.4
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 9.4e-71 270.8 191 73.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 9.4e-71 270.8 185 74.6
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 1.2e-70 270.4 192 69.3
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.2e-70 270.4 191 73.3
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 2.1e-70 269.6 182 75.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 2.7e-70 269.2 191 72.8
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.6e-70 268.9 186 73.7
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 4.7e-70 268.5 190 75.8
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 4.7e-70 268.5 187 73.3
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 4.7e-70 268.5 191 72.8
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 2.3e-69 266.2 187 74.9
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 4.0e-69 265.4 193 72.5
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 4.0e-69 265.4 183 74.3
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 6.8e-69 264.6 184 73.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 8.8e-69 264.2 205 67.3
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 8.8e-69 264.2 185 74.6
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.2e-68 263.8 192 72.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 1.2e-68 263.8 192 72.4
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.2e-68 263.8 192 71.9
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.2e-68 263.8 192 72.4
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.5e-68 263.5 184 72.8
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 2.0e-68 263.1 192 72.4
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.6e-68 262.7 178 73.0
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 4.4e-68 261.9 181 73.5
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 4.4e-68 261.9 182 74.2
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 4.4e-68 261.9 186 72.0
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 5.7e-68 261.5 180 73.3
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 7.5e-68 261.2 193 69.9
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 9.8e-68 260.8 192 70.8
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.7e-67 260.0 172 75.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 2.8e-67 259.2 177 75.7
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 6.3e-67 258.1 188 71.8
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 8.3e-67 257.7 187 72.7
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.4e-66 256.9 189 69.8
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.8e-66 256.5 179 72.6
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.8e-66 256.5 172 74.4
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.1e-66 255.4 187 71.7
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 5.4e-66 255.0 188 68.1
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 5.4e-66 255.0 188 68.1
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 5.4e-66 255.0 186 71.0
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 7.0e-66 254.6 191 69.1
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 7.0e-66 254.6 179 72.1
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 7.0e-66 254.6 215 62.3
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 9.1e-66 254.2 192 68.8
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 9.1e-66 254.2 182 70.3
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.6e-65 253.4 190 67.9
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.6e-65 253.4 192 68.2
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.6e-65 253.4 195 68.2
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 2.0e-65 253.1 190 68.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 3.5e-65 252.3 191 68.1
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 4.5e-65 251.9 184 69.0
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 4.5e-65 251.9 187 69.5
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 5.9e-65 251.5 192 68.2
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 7.7e-65 251.1 194 66.0
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 7.7e-65 251.1 185 69.2
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 5.0e-64 248.4 222 62.2
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 6.5e-64 248.1 206 65.5
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.5e-64 248.1 179 70.9
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 3.2e-63 245.7 185 69.2
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.6e-62 243.4 167 74.3
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 2.0e-60 236.5 212 60.4
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 4.9e-59 231.9 141 83.0
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 2.7e-57 226.1 159 71.1
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 3.5e-57 225.7 186 63.4
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 1.3e-56 223.8 186 63.4
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.7e-56 223.4 180 61.1
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 2.5e-55 219.5 189 60.3
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 8.0e-54 214.5 243 52.3
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.0e-53 214.2 156 69.9
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 1.4e-53 213.8 187 61.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 7.0e-50 201.4 170 64.7
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 6.8e-45 184.9 200 51.5
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 4.6e-41 172.2 422 32.7
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 9.5e-31 137.9 117 65.0
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.9e-27 126.3 81 71.6
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 2.4e-21 106.7 159 45.9
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 1.2e-20 104.4 172 33.1
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.3e-19 100.9 95 61.1
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.9e-07 60.5 35 82.9


User provided reference genes

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