Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1079G52 Lonicera japonica HOM05D005986 ORTHO05D007467 3.3e-110 401.7 206 100.0
Dinv07612 Davidia involucrata HOM05D005986 ORTHO05D007467 5.6e-102 374.4 206 91.3
Hma1.2p1_1356F.1_g277880 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 9.0e-100 367.1 206 90.3
Hma1.2p1_1356F.1_g277890 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 1.2e-99 366.7 205 90.2
GSVIVG01001142001 Vitis vinifera HOM05D005986 ORTHO05D007467 2.6e-99 365.5 204 88.7
Haze_12546 Corylus avellana HOM05D005986 ORTHO05D007467 1.3e-98 363.2 206 88.8
QL03p046965 Quercus lobata HOM05D005986 ORTHO05D007467 1.2e-96 356.7 205 86.8
Manes.08G097800 Manihot esculenta HOM05D005986 ORTHO05D007467 3.5e-96 355.1 206 85.9
Prupe.1G209800 Prunus persica HOM05D005986 ORTHO05D007467 6.0e-96 354.4 206 85.4
COL.COLO4_06172 Corchorus olitorius HOM05D005986 ORTHO05D007467 7.9e-96 354.0 206 86.4
CiPaw.05G096500 Carya illinoinensis HOM05D005986 ORTHO05D007467 5.1e-95 351.3 206 85.0
TWI36G0919 Tripterygium wilfordii HOM05D005986 ORTHO05D007467 5.1e-95 351.3 206 85.0
Eucgr.B03577 Eucalyptus grandis HOM05D005986 ORTHO05D007467 6.7e-95 350.9 208 84.6
Atru.chr12.1489 Acer truncatum HOM05D005986 ORTHO05D007467 1.5e-94 349.7 206 85.4
CANSAT56G1851 Cannabis sativa HOM05D005986 ORTHO05D007467 7.4e-94 347.4 206 85.4
CsaV3_3G043440 Cucumis sativus L. HOM05D005986 ORTHO05D007467 7.4e-94 347.4 206 83.0
Thecc.01G233000 Theobroma cacao HOM05D005986 ORTHO05D007467 7.4e-94 347.4 204 86.3
ClCG10G013170 Citrullus lanatus HOM05D005986 ORTHO05D007467 1.3e-93 346.7 206 83.0
Ciclev10028467m.g Citrus clementina HOM05D005986 ORTHO05D007467 2.8e-93 345.5 206 84.5
TAR371G0853 Trochodendron aralioides HOM05D005986 ORTHO05D007467 2.8e-93 345.5 204 84.3
MELO3C026759.2 Cucumis melo HOM05D005986 ORTHO05D007467 3.7e-93 345.1 206 82.0
Actinidia33985 Actinidia chinensis HOM05D005986 ORTHO05D007467 4.8e-93 344.7 199 87.9
MD13G1135500 Malus domestica HOM05D005986 ORTHO05D007467 8.1e-93 344.0 206 81.1
MD16G1131100 Malus domestica HOM05D005986 ORTHO05D007467 1.4e-92 343.2 206 82.0
Cc11_g14820 Coffea canephora HOM05D005986 ORTHO05D007467 3.1e-92 342.0 206 82.5
vmacro15979 Vaccinium macrocarpon HOM05D005986 ORTHO05D007467 6.9e-92 340.9 231 77.5
FvH4_4g21940 Fragaria vesca HOM05D005986 ORTHO05D007467 1.2e-91 340.1 207 81.6
FAN07G2431 Fragaria x ananassa HOM05D005986 ORTHO05D007467 1.2e-91 340.1 207 81.6
Lsat_1_v5_gn_3_33381 Lactuca sativa HOM05D005986 ORTHO05D007467 2.0e-91 339.3 206 81.1
RcHm_v2.0_Chr4g0428161 Rosa chinensis HOM05D005986 ORTHO05D007467 2.0e-91 339.3 207 81.2
Gohir.D12G085100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 2.6e-91 339.0 206 83.0
Potri.001G072400 Populus trichocarpa HOM05D005986 ORTHO05D007467 2.6e-91 339.0 204 81.4
Lj4g0000342 Lotus japonicus HOM05D005986 ORTHO05D007467 3.4e-91 338.6 206 82.0
Ca_22545_v3 Cicer arietinum L. HOM05D005986 ORTHO05D007467 7.6e-91 337.4 207 82.6
Gohir.A12G086500 Gossypium hirsutum HOM05D005986 ORTHO05D007467 7.6e-91 337.4 206 83.0
arahy.Tifrunner.gnm1.ann1.946FET Arachis hypogaea HOM05D005986 ORTHO05D007467 9.9e-91 337.0 206 82.0
FAN12G1445 Fragaria x ananassa HOM05D005986 ORTHO05D007467 9.9e-91 337.0 207 80.7
Nn4g22038 Nelumbo nucifera HOM05D005986 ORTHO05D007467 9.9e-91 337.0 204 82.8
arahy.Tifrunner.gnm1.ann1.7WS5BD Arachis hypogaea HOM05D005986 ORTHO05D007467 1.3e-90 336.7 206 82.0
COL.COLO4_04222 Corchorus olitorius HOM05D005986 ORTHO05D007467 1.3e-90 336.7 240 74.2
Sed0002782 Sechium edule HOM05D005986 ORTHO05D007467 2.9e-90 335.5 206 80.6
Sed0000271 Sechium edule HOM05D005986 ORTHO05D007467 3.8e-90 335.1 206 80.1
VMungo0251G3786 Vigna mungo HOM05D005986 ORTHO05D007467 3.8e-90 335.1 206 81.1
Phvul.003G273800 Phaseolus vulgaris HOM05D005986 ORTHO05D007467 4.9e-90 334.7 206 81.1
Potri.003G158400 Populus trichocarpa HOM05D005986 ORTHO05D007467 4.9e-90 334.7 201 82.1
Gohir.A09G003100 Gossypium hirsutum HOM05D005986 ORTHO05D007467 1.4e-89 333.2 206 81.1
Sc11g0000020 Simmondsia chinensis HOM05D005986 ORTHO05D007467 1.9e-89 332.8 206 79.6
PSO478G1012 Papaver somniferum HOM05D005986 ORTHO05D007467 4.2e-89 331.6 206 78.2
Gorai.008G095500 Gossypium raimondii HOM05D005986 ORTHO05D007467 5.5e-89 331.3 199 83.4
Hma1.2p1_0562F.1_g179030 Hydrangea macrophylla HOM05D005986 ORTHO05D007467 9.3e-89 330.5 184 90.2
PGR102G0450 Punica granatum HOM05D005986 ORTHO05D007467 9.3e-89 330.5 206 79.1
PSO017G0169 Papaver somniferum HOM05D005986 ORTHO05D007467 2.7e-88 328.9 206 77.2
MSTRG.8073 Avicennia marina HOM05D005986 ORTHO05D007467 6.0e-88 327.8 206 78.6
Zm00001eb084350 Zea mays HOM05D005986 ORTHO05D007467 6.0e-88 327.8 206 78.2
Lalb_Chr16g0391881 Lupinus albus HOM05D005986 ORTHO05D007467 7.9e-88 327.4 206 79.6
AUR62042784 Chenopodium quinoa HOM05D005986 ORTHO05D007467 1.0e-87 327.0 204 79.9
Sabra03G0114800 Salix brachista HOM05D005986 ORTHO05D007467 1.0e-87 327.0 206 80.1
Aqoxy1G00505 Aquilegia oxysepala HOM05D005986 ORTHO05D007467 1.8e-87 326.2 206 80.1
Carub.0008s0731 Capsella rubella HOM05D005986 ORTHO05D007467 1.8e-87 326.2 206 79.1
Sabra01G0051000 Salix brachista HOM05D005986 ORTHO05D007467 2.3e-87 325.9 203 79.3
CDE02G3075 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 3.9e-87 325.1 206 77.2
Cpa.g.sc102.15 Carica papaya HOM05D005986 ORTHO05D007467 5.1e-87 324.7 217 77.4
Thhalv10004270m.g Eutrema salsugineum HOM05D005986 ORTHO05D007467 6.7e-87 324.3 206 78.2
HanXRQChr17g0540591 Helianthus annuus HOM05D005986 ORTHO05D007467 6.7e-87 324.3 208 78.4
C07p38760 Brassica napus HOM05D005986 ORTHO05D007467 8.7e-87 323.9 204 78.9
Medtr8g070480 Medicago truncatula HOM05D005986 ORTHO05D007467 8.7e-87 323.9 207 78.7
AT5G47860 Arabidopsis thaliana HOM05D005986 ORTHO05D007467 1.5e-86 323.2 206 78.2
A06p39510 Brassica napus HOM05D005986 ORTHO05D007467 1.9e-86 322.8 204 78.4
BraA06t26866Z Brassica rapa HOM05D005986 ORTHO05D007467 1.9e-86 322.8 204 78.4
Solyc01g008070.3 Solanum lycopersicum HOM05D005986 ORTHO05D007467 1.9e-86 322.8 205 78.0
Sopen01g003630 Solanum pennellii HOM05D005986 ORTHO05D007467 1.9e-86 322.8 205 78.0
HPP92_001278 Vanilla planifolia HOM05D005986 ORTHO05D007467 1.9e-86 322.8 206 77.2
BolC7t44395H Brassica oleracea HOM05D005986 ORTHO05D007467 2.5e-86 322.4 204 78.4
PGSC0003DMG401016404 Solanum tuberosum HOM05D005986 ORTHO05D007467 2.5e-86 322.4 205 78.0
ECA246G5024 Erigeron canadensis HOM05D005986 ORTHO05D007467 3.3e-86 322.0 206 79.1
Gorai.006G003600 Gossypium raimondii HOM05D005986 ORTHO05D007467 3.3e-86 322.0 199 80.4
Os04g0405600 Oryza sativa ssp. japonica HOM05D005986 ORTHO05D007467 3.3e-86 322.0 204 77.0
Sp2g18360 Schrenkiella parvula HOM05D005986 ORTHO05D007467 3.3e-86 322.0 204 78.4
ATR0582G342 Amborella trichopoda HOM05D005986 ORTHO05D007467 5.6e-86 321.2 206 76.2
AL8G19850 Arabidopsis lyrata HOM05D005986 ORTHO05D007467 7.4e-86 320.9 206 77.2
EL10Ac4g08348 Beta vulgaris HOM05D005986 ORTHO05D007467 7.4e-86 320.9 204 78.4
AUR62019578 Chenopodium quinoa HOM05D005986 ORTHO05D007467 7.4e-86 320.9 204 78.4
TAR627G0548 Trochodendron aralioides HOM05D005986 ORTHO05D007467 7.4e-86 320.9 204 78.4
Gohir.D09G002900 Gossypium hirsutum HOM05D005986 ORTHO05D007467 1.3e-85 320.1 200 81.0
Nitab4.5_0002199g0020 Nicotiana tabacum HOM05D005986 ORTHO05D007467 1.3e-85 320.1 205 77.6
Migut.K01148 Erythranthe guttata HOM05D005986 ORTHO05D007467 2.8e-85 318.9 204 77.9
Nitab4.5_0000069g0470 Nicotiana tabacum HOM05D005986 ORTHO05D007467 2.8e-85 318.9 205 77.6
HanXRQChr06g0175331 Helianthus annuus HOM05D005986 ORTHO05D007467 1.4e-84 316.6 206 77.7
THA.LOC104807194 Tarenaya hassleriana HOM05D005986 ORTHO05D007467 1.4e-84 316.6 206 76.7
CAN.G282.72 Capsicum annuum HOM05D005986 ORTHO05D007467 1.8e-84 316.2 205 76.6
CARHR184430 Cardamine hirsuta HOM05D005986 ORTHO05D007467 6.9e-84 314.3 206 76.2
CDE06G1414 Ceratophyllum demersum HOM05D005986 ORTHO05D007467 2.2e-82 309.3 206 74.3
Peaxi162Scf00097g01214 Petunia axillaris HOM05D005986 ORTHO05D007467 1.1e-81 307.0 204 75.5
Aa31LG3G14160 Aethionema arabicum HOM05D005986 ORTHO05D007467 1.4e-81 306.6 236 67.4
Lsat_1_v5_gn_1_109040 Lactuca sativa HOM05D005986 ORTHO05D007467 3.9e-79 298.5 215 70.7
TPR.G6140 Trifolium pratense HOM05D005986 ORTHO05D007467 1.1e-78 297.0 207 74.4
unitig_747.g21105 Utricularia gibba HOM05D005986 ORTHO05D007467 1.1e-78 297.0 206 72.3
Oeu056144.2 Olea europaea HOM05D005986 ORTHO05D007467 1.1e-76 290.4 166 87.3
SGA_v2.0_scaffold258G45750 Striga asiatica HOM05D005986 ORTHO05D007467 6.9e-76 287.7 198 73.7
SEGI_07632 Sequoiadendron giganteum HOM05D005986 ORTHO05D007467 2.2e-74 282.7 198 70.7
Migut.H01175 Erythranthe guttata HOM05D005986 ORTHO05D007467 1.6e-72 276.6 181 75.1
Glyma.08G265400 Glycine max HOM05D005986 ORTHO05D007467 2.3e-71 272.7 206 69.4
DCAR_006993 Daucus carota HOM05D005986 ORTHO05D007467 1.4e-68 263.5 203 70.9
AagrBONN_evm.TU.Sc2ySwM_228.1585 Anthoceros agrestis HOM05D005986 ORTHO05D007467 9.7e-62 240.7 194 61.3
CSS0041530 Camellia sinensis var. sinensis HOM05D005986 ORTHO05D007467 1.4e-60 236.9 134 89.6
SMO145G0091 Selaginella moellendorffii HOM05D005986 ORTHO05D007467 3.1e-60 235.7 196 60.7
Duzib147G0525 Durio zibethinus HOM05D005986 ORTHO05D007467 1.0e-55 220.7 206 59.2
Pp3c24_14070 Physcomitrium patens HOM05D005986 ORTHO05D007467 5.9e-51 204.9 200 50.0
Lsat_1_v5_gn_5_29241 Lactuca sativa HOM05D005986 ORTHO05D007467 1.4e-44 183.7 155 63.2
Cre01.g000900 Chlamydomonas reinhardtii HOM05D005986 ORTHO05D007467 2.3e-34 149.8 209 39.7
CSS0026733 Camellia sinensis var. sinensis HOM05D005986 ORTHO05D007467 5.4e-20 102.1 53 92.5
Actinidia13521 Actinidia chinensis HOM05D005986 ORTHO05D007467 1.9e-17 93.6 61 77.0
Lsat_1_v5_gn_7_17261 Lactuca sativa HOM05D005986 ORTHO05D007467 7.3e-17 91.7 72 66.7
Mapoly0124s0049 Marchantia polymorpha HOM05D006336 ORTHO05D007819 1.6e-11 73.9 143 34.3
PRCOL_00002187 Prasinoderma coloniale HOM05D005986 ORTHO05D007467 2.0e-11 73.6 171 33.3
MCO06G181 Micromonas commoda HOM05D005986 ORTHO05D007467 6.0e-11 72.0 188 27.1
SMO351G0262 Selaginella moellendorffii HOM05D006336 ORTHO05D007819 7.3e-09 65.1 139 31.7
THA.LOC104799597 Tarenaya hassleriana HOM05D006336 ORTHO05D007819 3.1e-07 59.7 122 32.0
Cre06.g278264 Chlamydomonas reinhardtii HOM05D006336 ORTHO05D007819 1.2e-06 57.8 89 33.7
AagrBONN_evm.TU.Sc2ySwM_362.2113 Anthoceros agrestis HOM05D006336 ORTHO05D007819 4.4e-06 55.8 160 29.4
Nitab4.5_0008763g0010 Nicotiana tabacum HOM05D006336 ORTHO05D007819 5.8e-06 55.5 103 30.1
Psat6g024200 Pisum sativum HOM05D006336 ORTHO05D007819 5.8e-06 55.5 74 32.4
Dinv09419 Davidia involucrata HOM05D006336 ORTHO05D007819 9.9e-06 54.7 113 31.0


User provided reference genes

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