Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1043T80 Lonicera japonica HOM05D003373 ORTHO05D048345 2.6e-122 442.2 246 100.0
Actinidia04028 Actinidia chinensis HOM05D003373 ORTHO05D004419 6.0e-18 95.5 170 48.8
Dinv24947 Davidia involucrata HOM05D003373 ORTHO05D004419 2.5e-16 90.1 175 46.9
Hma1.2p1_1045F.1_g251400 Hydrangea macrophylla HOM05D003373 ORTHO05D004419 8.1e-15 85.1 171 52.6
GSVIVG01020088001 Vitis vinifera HOM05D003373 ORTHO05D004419 2.4e-14 83.6 168 45.2
vmacro16318 Vaccinium macrocarpon HOM05D003373 ORTHO05D004419 7.6e-13 78.6 178 46.1
Rhsim12G0129000 Rhododendron simsii HOM05D003373 ORTHO05D004419 1.7e-12 77.4 176 46.0
CSS0033815 Camellia sinensis var. sinensis HOM05D003373 ORTHO05D004419 2.9e-12 76.6 145 53.1
Dinv34191 Davidia involucrata HOM05D003373 ORTHO05D004419 4.2e-11 72.8 94 53.2
Prupe.1G265800 Prunus persica HOM05D003373 ORTHO05D004419 9.3e-11 71.6 178 43.8
Cfa009067 Carpinus fangiana HOM05D003373 ORTHO05D004419 1.2e-10 71.2 169 42.6
Hma1.2p1_0265F.1_g106500 Hydrangea macrophylla HOM05D003373 ORTHO05D048345 6.0e-10 68.9 97 52.6
Ciclev10031519m.g Citrus clementina HOM05D003373 ORTHO05D004419 6.7e-09 65.5 185 44.3
QL03p066330 Quercus lobata HOM05D003373 ORTHO05D004419 1.1e-08 64.7 173 42.2
DCAR_031055 Daucus carota HOM05D003373 ORTHO05D004419 1.9e-08 63.9 160 45.6
Lalb_Chr04g0256431 Lupinus albus HOM05D003373 ORTHO05D004419 1.9e-08 63.9 157 45.2
Psat2g126240 Pisum sativum HOM05D003373 ORTHO05D004419 2.5e-08 63.5 148 44.6
Lsat_1_v5_gn_8_163340 Lactuca sativa HOM05D003373 ORTHO05D004419 3.3e-08 63.2 162 42.6
Medtr5g037960 Medicago truncatula HOM05D003373 ORTHO05D004419 4.3e-08 62.8 165 49.1
Oeu043029.1 Olea europaea HOM05D003373 ORTHO05D004419 2.1e-07 60.5 176 46.0
Phvul.002G067800 Phaseolus vulgaris HOM05D003373 ORTHO05D004419 2.1e-07 60.5 144 45.1
VMungo1215G0200 Vigna mungo HOM05D003373 ORTHO05D004419 1.8e-06 57.4 144 47.2
arahy.Tifrunner.gnm1.ann1.NIK4ZB Arachis hypogaea HOM05D003373 ORTHO05D004419 2.4e-06 57.0 162 40.7
Manes.05G095400 Manihot esculenta HOM05D003373 ORTHO05D004419 2.4e-06 57.0 169 40.2
CiPaw.05G141000 Carya illinoinensis HOM05D003373 ORTHO05D004419 4.0e-06 56.2 169 41.4
TAR374G1081 Trochodendron aralioides HOM05D003373 ORTHO05D004419 4.0e-06 56.2 93 46.2
Duzib248G1211 Durio zibethinus HOM05D003373 ORTHO05D004419 5.3e-06 55.8 169 49.1


User provided reference genes

Program Settings